diff --git a/docs/index.html b/docs/index.html index 660ec66e..567eaf26 100644 --- a/docs/index.html +++ b/docs/index.html @@ -77,7 +77,7 @@
-

Build Status codecov.io CRAN_Status_Badge CRAN_Status_Badge

+

Build Status codecov.io CRAN_Status_Badge CRAN_Status_Badge

Cyclops is part of the HADES.

diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml index d55408be..68ce28c5 100644 --- a/docs/pkgdown.yml +++ b/docs/pkgdown.yml @@ -2,5 +2,5 @@ pandoc: 3.1.2 pkgdown: 2.0.7 pkgdown_sha: ~ articles: {} -last_built: 2023-10-31T13:12Z +last_built: 2023-10-31T21:54Z diff --git a/docs/reference/confint.cyclopsFit.html b/docs/reference/confint.cyclopsFit.html index 9cccd20d..1569fb0e 100644 --- a/docs/reference/confint.cyclopsFit.html +++ b/docs/reference/confint.cyclopsFit.html @@ -115,7 +115,7 @@

Examples

#Generate some simulated data:
 sim <- simulateCyclopsData(nstrata = 1, nrows = 1000, ncovars = 2, eCovarsPerRow = 0.5, 
                            model = "poisson")
-#> Sparseness = 77 %
+#> Sparseness = 75.9 %
 cyclopsData <- convertToCyclopsData(sim$outcomes, sim$covariates, modelType = "pr", 
                                     addIntercept = TRUE)
 #> Sorting covariates by covariateId and rowId
@@ -128,594 +128,99 @@ 

Examples

#Fit the model fit <- fitCyclopsModel(cyclopsData,prior = prior, control = control) #> Using cross-validation selector type byRow -#> Performing 10-fold cross-validation [seed = 1698757931] with data partitions of sizes 100 100 100 100 100 100 100 100 100 100 +#> Performing 10-fold cross-validation [seed = 1698789245] with data partitions of sizes 100 100 100 100 100 100 100 100 100 100 #> Using 1 thread(s) -#> Starting var = 0.23 (default) -#> Running at Laplace(2.94884) None Grid-point #1 at 0.23 Fold #1 Rep #1 pred log like = 267.858 -#> Running at Laplace(2.94884) None Grid-point #1 at 0.23 Fold #2 Rep #1 pred log like = 210.218 -#> Running at Laplace(2.94884) None Grid-point #1 at 0.23 Fold #3 Rep #1 pred log like = 247.642 -#> Running at Laplace(2.94884) None Grid-point #1 at 0.23 Fold #4 Rep #1 pred log like = 268.625 -#> Running at Laplace(2.94884) None Grid-point #1 at 0.23 Fold #5 Rep #1 pred log like = 234.92 -#> Running at Laplace(2.94884) None Grid-point #1 at 0.23 Fold #6 Rep #1 pred log like = 256.935 -#> Running at Laplace(2.94884) None Grid-point #1 at 0.23 Fold #7 Rep #1 pred log like = 237.206 -#> Running at Laplace(2.94884) None Grid-point #1 at 0.23 Fold #8 Rep #1 pred log like = 203.575 -#> Running at Laplace(2.94884) None Grid-point #1 at 0.23 Fold #9 Rep #1 pred log like = 268.979 -#> Running at Laplace(2.94884) None Grid-point #1 at 0.23 Fold #10 Rep #1 pred log like = 313.499 -#> AvgPred = 250.946 with stdev = 30.3841 -#> Completed at 0.23 -#> Next point at 2.3 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> -#> Running at Laplace(0.932505) None Grid-point #2 at 2.3 Fold #1 Rep #1 pred log like = 267.817 -#> Running at Laplace(0.932505) None Grid-point #2 at 2.3 Fold #2 Rep #1 pred log like = 210.18 -#> Running at Laplace(0.932505) None Grid-point #2 at 2.3 Fold #3 Rep #1 pred log like = 247.667 -#> Running at Laplace(0.932505) None Grid-point #2 at 2.3 Fold #4 Rep #1 pred log like = 268.65 -#> Running at Laplace(0.932505) None Grid-point #2 at 2.3 Fold #5 Rep #1 pred log like = 234.965 -#> Running at Laplace(0.932505) None Grid-point #2 at 2.3 Fold #6 Rep #1 pred log like = 256.945 -#> Running at Laplace(0.932505) None Grid-point #2 at 2.3 Fold #7 Rep #1 pred log like = 237.151 -#> Running at Laplace(0.932505) None Grid-point #2 at 2.3 Fold #8 Rep #1 pred log like = 203.606 -#> Running at Laplace(0.932505) None Grid-point #2 at 2.3 Fold #9 Rep #1 pred log like = 268.987 -#> Running at Laplace(0.932505) None Grid-point #2 at 2.3 Fold #10 Rep #1 pred log like = 313.505 -#> AvgPred = 250.947 with stdev = 30.3849 -#> Completed at 2.3 -#> Next point at 23 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> -#> Running at Laplace(0.294884) None Grid-point #3 at 23 Fold #1 Rep #1 pred log like = 267.803 -#> Running at Laplace(0.294884) None Grid-point #3 at 23 Fold #2 Rep #1 pred log like = 210.168 -#> Running at Laplace(0.294884) None Grid-point #3 at 23 Fold #3 Rep #1 pred log like = 247.674 -#> Running at Laplace(0.294884) None Grid-point #3 at 23 Fold #4 Rep #1 pred log like = 268.657 -#> Running at Laplace(0.294884) None Grid-point #3 at 23 Fold #5 Rep #1 pred log like = 234.98 -#> Running at Laplace(0.294884) None Grid-point #3 at 23 Fold #6 Rep #1 pred log like = 256.948 -#> Running at Laplace(0.294884) None Grid-point #3 at 23 Fold #7 Rep #1 pred log like = 237.134 -#> Running at Laplace(0.294884) None Grid-point #3 at 23 Fold #8 Rep #1 pred log like = 203.616 -#> Running at Laplace(0.294884) None Grid-point #3 at 23 Fold #9 Rep #1 pred log like = 268.988 -#> Running at Laplace(0.294884) None Grid-point #3 at 23 Fold #10 Rep #1 pred log like = 313.506 -#> AvgPred = 250.947 with stdev = 30.3852 -#> Completed at 23 -#> Next point at 230 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> -#> Running at Laplace(0.0932505) None Grid-point #4 at 230 Fold #1 Rep #1 pred log like = 267.799 -#> Running at Laplace(0.0932505) None Grid-point #4 at 230 Fold #2 Rep #1 pred log like = 210.165 -#> Running at Laplace(0.0932505) None Grid-point #4 at 230 Fold #3 Rep #1 pred log like = 247.677 -#> Running at Laplace(0.0932505) None Grid-point #4 at 230 Fold #4 Rep #1 pred log like = 268.66 -#> Running at Laplace(0.0932505) None Grid-point #4 at 230 Fold #5 Rep #1 pred log like = 234.984 -#> Running at Laplace(0.0932505) None Grid-point #4 at 230 Fold #6 Rep #1 pred log like = 256.948 -#> Running at Laplace(0.0932505) None Grid-point #4 at 230 Fold #7 Rep #1 pred log like = 237.128 -#> Running at Laplace(0.0932505) None Grid-point #4 at 230 Fold #8 Rep #1 pred log like = 203.619 -#> Running at Laplace(0.0932505) None Grid-point #4 at 230 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(0.0932505) None Grid-point #4 at 230 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 230 -#> Next point at 2300 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> -#> Running at Laplace(0.0294884) None Grid-point #5 at 2300 Fold #1 Rep #1 pred log like = 267.798 -#> Running at Laplace(0.0294884) None Grid-point #5 at 2300 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(0.0294884) None Grid-point #5 at 2300 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(0.0294884) None Grid-point #5 at 2300 Fold #4 Rep #1 pred log like = 268.66 -#> Running at Laplace(0.0294884) None Grid-point #5 at 2300 Fold #5 Rep #1 pred log like = 234.985 -#> Running at Laplace(0.0294884) None Grid-point #5 at 2300 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(0.0294884) None Grid-point #5 at 2300 Fold #7 Rep #1 pred log like = 237.126 -#> Running at Laplace(0.0294884) None Grid-point #5 at 2300 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(0.0294884) None Grid-point #5 at 2300 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(0.0294884) None Grid-point #5 at 2300 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2300 -#> Next point at 23000 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> -#> Running at Laplace(0.00932505) None Grid-point #6 at 23000 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(0.00932505) None Grid-point #6 at 23000 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(0.00932505) None Grid-point #6 at 23000 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(0.00932505) None Grid-point #6 at 23000 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(0.00932505) None Grid-point #6 at 23000 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(0.00932505) None Grid-point #6 at 23000 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(0.00932505) None Grid-point #6 at 23000 Fold #7 Rep #1 pred log like = 237.126 -#> Running at Laplace(0.00932505) None Grid-point #6 at 23000 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(0.00932505) None Grid-point #6 at 23000 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(0.00932505) None Grid-point #6 at 23000 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 23000 -#> Next point at 230000 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> -#> Running at Laplace(0.00294884) None Grid-point #7 at 230000 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(0.00294884) None Grid-point #7 at 230000 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(0.00294884) None Grid-point #7 at 230000 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(0.00294884) None Grid-point #7 at 230000 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(0.00294884) None Grid-point #7 at 230000 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(0.00294884) None Grid-point #7 at 230000 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(0.00294884) None Grid-point #7 at 230000 Fold #7 Rep #1 pred log like = 237.126 -#> Running at Laplace(0.00294884) None Grid-point #7 at 230000 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(0.00294884) None Grid-point #7 at 230000 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(0.00294884) None Grid-point #7 at 230000 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 230000 -#> Next point at 2.3e+06 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> -#> Running at Laplace(0.000932505) None Grid-point #8 at 2.3e+06 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(0.000932505) None Grid-point #8 at 2.3e+06 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(0.000932505) None Grid-point #8 at 2.3e+06 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(0.000932505) None Grid-point #8 at 2.3e+06 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(0.000932505) None Grid-point #8 at 2.3e+06 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(0.000932505) None Grid-point #8 at 2.3e+06 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(0.000932505) None Grid-point #8 at 2.3e+06 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(0.000932505) None Grid-point #8 at 2.3e+06 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(0.000932505) None Grid-point #8 at 2.3e+06 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(0.000932505) None Grid-point #8 at 2.3e+06 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+06 -#> Next point at 2.3e+07 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> -#> Running at Laplace(0.000294884) None Grid-point #9 at 2.3e+07 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(0.000294884) None Grid-point #9 at 2.3e+07 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(0.000294884) None Grid-point #9 at 2.3e+07 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(0.000294884) None Grid-point #9 at 2.3e+07 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(0.000294884) None Grid-point #9 at 2.3e+07 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(0.000294884) None Grid-point #9 at 2.3e+07 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(0.000294884) None Grid-point #9 at 2.3e+07 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(0.000294884) None Grid-point #9 at 2.3e+07 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(0.000294884) None Grid-point #9 at 2.3e+07 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(0.000294884) None Grid-point #9 at 2.3e+07 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+07 -#> Next point at 2.3e+08 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> search[ 2.3e+07 ] = 250.948(30.3853) -#> -#> Running at Laplace(9.32505e-05) None Grid-point #10 at 2.3e+08 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(9.32505e-05) None Grid-point #10 at 2.3e+08 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(9.32505e-05) None Grid-point #10 at 2.3e+08 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(9.32505e-05) None Grid-point #10 at 2.3e+08 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(9.32505e-05) None Grid-point #10 at 2.3e+08 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(9.32505e-05) None Grid-point #10 at 2.3e+08 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(9.32505e-05) None Grid-point #10 at 2.3e+08 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(9.32505e-05) None Grid-point #10 at 2.3e+08 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(9.32505e-05) None Grid-point #10 at 2.3e+08 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(9.32505e-05) None Grid-point #10 at 2.3e+08 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+08 -#> Next point at 2.3e+09 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> search[ 2.3e+07 ] = 250.948(30.3853) -#> search[ 2.3e+08 ] = 250.948(30.3853) -#> -#> Running at Laplace(2.94884e-05) None Grid-point #11 at 2.3e+09 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(2.94884e-05) None Grid-point #11 at 2.3e+09 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(2.94884e-05) None Grid-point #11 at 2.3e+09 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(2.94884e-05) None Grid-point #11 at 2.3e+09 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(2.94884e-05) None Grid-point #11 at 2.3e+09 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(2.94884e-05) None Grid-point #11 at 2.3e+09 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(2.94884e-05) None Grid-point #11 at 2.3e+09 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(2.94884e-05) None Grid-point #11 at 2.3e+09 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(2.94884e-05) None Grid-point #11 at 2.3e+09 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(2.94884e-05) None Grid-point #11 at 2.3e+09 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+09 -#> Next point at 2.3e+10 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> search[ 2.3e+07 ] = 250.948(30.3853) -#> search[ 2.3e+08 ] = 250.948(30.3853) -#> search[ 2.3e+09 ] = 250.948(30.3853) -#> -#> Running at Laplace(9.32505e-06) None Grid-point #12 at 2.3e+10 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(9.32505e-06) None Grid-point #12 at 2.3e+10 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(9.32505e-06) None Grid-point #12 at 2.3e+10 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(9.32505e-06) None Grid-point #12 at 2.3e+10 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(9.32505e-06) None Grid-point #12 at 2.3e+10 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(9.32505e-06) None Grid-point #12 at 2.3e+10 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(9.32505e-06) None Grid-point #12 at 2.3e+10 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(9.32505e-06) None Grid-point #12 at 2.3e+10 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(9.32505e-06) None Grid-point #12 at 2.3e+10 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(9.32505e-06) None Grid-point #12 at 2.3e+10 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+10 -#> Next point at 2.3e+11 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> search[ 2.3e+07 ] = 250.948(30.3853) -#> search[ 2.3e+08 ] = 250.948(30.3853) -#> search[ 2.3e+09 ] = 250.948(30.3853) -#> search[ 2.3e+10 ] = 250.948(30.3853) -#> -#> Running at Laplace(2.94884e-06) None Grid-point #13 at 2.3e+11 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(2.94884e-06) None Grid-point #13 at 2.3e+11 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(2.94884e-06) None Grid-point #13 at 2.3e+11 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(2.94884e-06) None Grid-point #13 at 2.3e+11 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(2.94884e-06) None Grid-point #13 at 2.3e+11 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(2.94884e-06) None Grid-point #13 at 2.3e+11 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(2.94884e-06) None Grid-point #13 at 2.3e+11 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(2.94884e-06) None Grid-point #13 at 2.3e+11 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(2.94884e-06) None Grid-point #13 at 2.3e+11 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(2.94884e-06) None Grid-point #13 at 2.3e+11 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+11 -#> Next point at 2.3e+12 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> search[ 2.3e+07 ] = 250.948(30.3853) -#> search[ 2.3e+08 ] = 250.948(30.3853) -#> search[ 2.3e+09 ] = 250.948(30.3853) -#> search[ 2.3e+10 ] = 250.948(30.3853) -#> search[ 2.3e+11 ] = 250.948(30.3853) -#> -#> Running at Laplace(9.32505e-07) None Grid-point #14 at 2.3e+12 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(9.32505e-07) None Grid-point #14 at 2.3e+12 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(9.32505e-07) None Grid-point #14 at 2.3e+12 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(9.32505e-07) None Grid-point #14 at 2.3e+12 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(9.32505e-07) None Grid-point #14 at 2.3e+12 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(9.32505e-07) None Grid-point #14 at 2.3e+12 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(9.32505e-07) None Grid-point #14 at 2.3e+12 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(9.32505e-07) None Grid-point #14 at 2.3e+12 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(9.32505e-07) None Grid-point #14 at 2.3e+12 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(9.32505e-07) None Grid-point #14 at 2.3e+12 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+12 -#> Next point at 2.3e+13 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> search[ 2.3e+07 ] = 250.948(30.3853) -#> search[ 2.3e+08 ] = 250.948(30.3853) -#> search[ 2.3e+09 ] = 250.948(30.3853) -#> search[ 2.3e+10 ] = 250.948(30.3853) -#> search[ 2.3e+11 ] = 250.948(30.3853) -#> search[ 2.3e+12 ] = 250.948(30.3853) -#> -#> Running at Laplace(2.94884e-07) None Grid-point #15 at 2.3e+13 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(2.94884e-07) None Grid-point #15 at 2.3e+13 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(2.94884e-07) None Grid-point #15 at 2.3e+13 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(2.94884e-07) None Grid-point #15 at 2.3e+13 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(2.94884e-07) None Grid-point #15 at 2.3e+13 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(2.94884e-07) None Grid-point #15 at 2.3e+13 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(2.94884e-07) None Grid-point #15 at 2.3e+13 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(2.94884e-07) None Grid-point #15 at 2.3e+13 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(2.94884e-07) None Grid-point #15 at 2.3e+13 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(2.94884e-07) None Grid-point #15 at 2.3e+13 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+13 -#> Next point at 2.3e+14 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> search[ 2.3e+07 ] = 250.948(30.3853) -#> search[ 2.3e+08 ] = 250.948(30.3853) -#> search[ 2.3e+09 ] = 250.948(30.3853) -#> search[ 2.3e+10 ] = 250.948(30.3853) -#> search[ 2.3e+11 ] = 250.948(30.3853) -#> search[ 2.3e+12 ] = 250.948(30.3853) -#> search[ 2.3e+13 ] = 250.948(30.3853) -#> -#> Running at Laplace(9.32505e-08) None Grid-point #16 at 2.3e+14 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(9.32505e-08) None Grid-point #16 at 2.3e+14 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(9.32505e-08) None Grid-point #16 at 2.3e+14 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(9.32505e-08) None Grid-point #16 at 2.3e+14 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(9.32505e-08) None Grid-point #16 at 2.3e+14 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(9.32505e-08) None Grid-point #16 at 2.3e+14 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(9.32505e-08) None Grid-point #16 at 2.3e+14 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(9.32505e-08) None Grid-point #16 at 2.3e+14 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(9.32505e-08) None Grid-point #16 at 2.3e+14 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(9.32505e-08) None Grid-point #16 at 2.3e+14 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+14 -#> Next point at 2.3e+15 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> search[ 2.3e+07 ] = 250.948(30.3853) -#> search[ 2.3e+08 ] = 250.948(30.3853) -#> search[ 2.3e+09 ] = 250.948(30.3853) -#> search[ 2.3e+10 ] = 250.948(30.3853) -#> search[ 2.3e+11 ] = 250.948(30.3853) -#> search[ 2.3e+12 ] = 250.948(30.3853) -#> search[ 2.3e+13 ] = 250.948(30.3853) -#> search[ 2.3e+14 ] = 250.948(30.3853) -#> -#> Running at Laplace(2.94884e-08) None Grid-point #17 at 2.3e+15 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(2.94884e-08) None Grid-point #17 at 2.3e+15 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(2.94884e-08) None Grid-point #17 at 2.3e+15 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(2.94884e-08) None Grid-point #17 at 2.3e+15 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(2.94884e-08) None Grid-point #17 at 2.3e+15 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(2.94884e-08) None Grid-point #17 at 2.3e+15 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(2.94884e-08) None Grid-point #17 at 2.3e+15 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(2.94884e-08) None Grid-point #17 at 2.3e+15 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(2.94884e-08) None Grid-point #17 at 2.3e+15 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(2.94884e-08) None Grid-point #17 at 2.3e+15 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+15 -#> Next point at 2.3e+16 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> search[ 2.3e+07 ] = 250.948(30.3853) -#> search[ 2.3e+08 ] = 250.948(30.3853) -#> search[ 2.3e+09 ] = 250.948(30.3853) -#> search[ 2.3e+10 ] = 250.948(30.3853) -#> search[ 2.3e+11 ] = 250.948(30.3853) -#> search[ 2.3e+12 ] = 250.948(30.3853) -#> search[ 2.3e+13 ] = 250.948(30.3853) -#> search[ 2.3e+14 ] = 250.948(30.3853) -#> search[ 2.3e+15 ] = 250.948(30.3853) -#> -#> Running at Laplace(9.32505e-09) None Grid-point #18 at 2.3e+16 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(9.32505e-09) None Grid-point #18 at 2.3e+16 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(9.32505e-09) None Grid-point #18 at 2.3e+16 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(9.32505e-09) None Grid-point #18 at 2.3e+16 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(9.32505e-09) None Grid-point #18 at 2.3e+16 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(9.32505e-09) None Grid-point #18 at 2.3e+16 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(9.32505e-09) None Grid-point #18 at 2.3e+16 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(9.32505e-09) None Grid-point #18 at 2.3e+16 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(9.32505e-09) None Grid-point #18 at 2.3e+16 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(9.32505e-09) None Grid-point #18 at 2.3e+16 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+16 -#> Next point at 2.3e+17 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> search[ 2.3e+07 ] = 250.948(30.3853) -#> search[ 2.3e+08 ] = 250.948(30.3853) -#> search[ 2.3e+09 ] = 250.948(30.3853) -#> search[ 2.3e+10 ] = 250.948(30.3853) -#> search[ 2.3e+11 ] = 250.948(30.3853) -#> search[ 2.3e+12 ] = 250.948(30.3853) -#> search[ 2.3e+13 ] = 250.948(30.3853) -#> search[ 2.3e+14 ] = 250.948(30.3853) -#> search[ 2.3e+15 ] = 250.948(30.3853) -#> search[ 2.3e+16 ] = 250.948(30.3853) -#> -#> Running at Laplace(2.94884e-09) None Grid-point #19 at 2.3e+17 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(2.94884e-09) None Grid-point #19 at 2.3e+17 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(2.94884e-09) None Grid-point #19 at 2.3e+17 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(2.94884e-09) None Grid-point #19 at 2.3e+17 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(2.94884e-09) None Grid-point #19 at 2.3e+17 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(2.94884e-09) None Grid-point #19 at 2.3e+17 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(2.94884e-09) None Grid-point #19 at 2.3e+17 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(2.94884e-09) None Grid-point #19 at 2.3e+17 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(2.94884e-09) None Grid-point #19 at 2.3e+17 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(2.94884e-09) None Grid-point #19 at 2.3e+17 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+17 -#> Next point at 2.3e+18 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> search[ 2.3e+07 ] = 250.948(30.3853) -#> search[ 2.3e+08 ] = 250.948(30.3853) -#> search[ 2.3e+09 ] = 250.948(30.3853) -#> search[ 2.3e+10 ] = 250.948(30.3853) -#> search[ 2.3e+11 ] = 250.948(30.3853) -#> search[ 2.3e+12 ] = 250.948(30.3853) -#> search[ 2.3e+13 ] = 250.948(30.3853) -#> search[ 2.3e+14 ] = 250.948(30.3853) -#> search[ 2.3e+15 ] = 250.948(30.3853) -#> search[ 2.3e+16 ] = 250.948(30.3853) -#> search[ 2.3e+17 ] = 250.948(30.3853) -#> -#> Running at Laplace(9.32505e-10) None Grid-point #20 at 2.3e+18 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(9.32505e-10) None Grid-point #20 at 2.3e+18 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(9.32505e-10) None Grid-point #20 at 2.3e+18 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(9.32505e-10) None Grid-point #20 at 2.3e+18 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(9.32505e-10) None Grid-point #20 at 2.3e+18 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(9.32505e-10) None Grid-point #20 at 2.3e+18 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(9.32505e-10) None Grid-point #20 at 2.3e+18 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(9.32505e-10) None Grid-point #20 at 2.3e+18 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(9.32505e-10) None Grid-point #20 at 2.3e+18 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(9.32505e-10) None Grid-point #20 at 2.3e+18 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+18 -#> Next point at 2.3e+19 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> search[ 2.3e+07 ] = 250.948(30.3853) -#> search[ 2.3e+08 ] = 250.948(30.3853) -#> search[ 2.3e+09 ] = 250.948(30.3853) -#> search[ 2.3e+10 ] = 250.948(30.3853) -#> search[ 2.3e+11 ] = 250.948(30.3853) -#> search[ 2.3e+12 ] = 250.948(30.3853) -#> search[ 2.3e+13 ] = 250.948(30.3853) -#> search[ 2.3e+14 ] = 250.948(30.3853) -#> search[ 2.3e+15 ] = 250.948(30.3853) -#> search[ 2.3e+16 ] = 250.948(30.3853) -#> search[ 2.3e+17 ] = 250.948(30.3853) -#> search[ 2.3e+18 ] = 250.948(30.3853) -#> -#> Running at Laplace(2.94884e-10) None Grid-point #21 at 2.3e+19 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(2.94884e-10) None Grid-point #21 at 2.3e+19 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(2.94884e-10) None Grid-point #21 at 2.3e+19 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(2.94884e-10) None Grid-point #21 at 2.3e+19 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(2.94884e-10) None Grid-point #21 at 2.3e+19 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(2.94884e-10) None Grid-point #21 at 2.3e+19 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(2.94884e-10) None Grid-point #21 at 2.3e+19 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(2.94884e-10) None Grid-point #21 at 2.3e+19 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(2.94884e-10) None Grid-point #21 at 2.3e+19 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(2.94884e-10) None Grid-point #21 at 2.3e+19 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+19 -#> Next point at 2.3e+20 with value 0 and continue = 1 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> search[ 2.3e+07 ] = 250.948(30.3853) -#> search[ 2.3e+08 ] = 250.948(30.3853) -#> search[ 2.3e+09 ] = 250.948(30.3853) -#> search[ 2.3e+10 ] = 250.948(30.3853) -#> search[ 2.3e+11 ] = 250.948(30.3853) -#> search[ 2.3e+12 ] = 250.948(30.3853) -#> search[ 2.3e+13 ] = 250.948(30.3853) -#> search[ 2.3e+14 ] = 250.948(30.3853) -#> search[ 2.3e+15 ] = 250.948(30.3853) -#> search[ 2.3e+16 ] = 250.948(30.3853) -#> search[ 2.3e+17 ] = 250.948(30.3853) -#> search[ 2.3e+18 ] = 250.948(30.3853) -#> search[ 2.3e+19 ] = 250.948(30.3853) -#> -#> Running at Laplace(9.32505e-11) None Grid-point #22 at 2.3e+20 Fold #1 Rep #1 pred log like = 267.797 -#> Running at Laplace(9.32505e-11) None Grid-point #22 at 2.3e+20 Fold #2 Rep #1 pred log like = 210.163 -#> Running at Laplace(9.32505e-11) None Grid-point #22 at 2.3e+20 Fold #3 Rep #1 pred log like = 247.678 -#> Running at Laplace(9.32505e-11) None Grid-point #22 at 2.3e+20 Fold #4 Rep #1 pred log like = 268.661 -#> Running at Laplace(9.32505e-11) None Grid-point #22 at 2.3e+20 Fold #5 Rep #1 pred log like = 234.986 -#> Running at Laplace(9.32505e-11) None Grid-point #22 at 2.3e+20 Fold #6 Rep #1 pred log like = 256.949 -#> Running at Laplace(9.32505e-11) None Grid-point #22 at 2.3e+20 Fold #7 Rep #1 pred log like = 237.125 -#> Running at Laplace(9.32505e-11) None Grid-point #22 at 2.3e+20 Fold #8 Rep #1 pred log like = 203.62 -#> Running at Laplace(9.32505e-11) None Grid-point #22 at 2.3e+20 Fold #9 Rep #1 pred log like = 268.989 -#> Running at Laplace(9.32505e-11) None Grid-point #22 at 2.3e+20 Fold #10 Rep #1 pred log like = 313.507 -#> AvgPred = 250.948 with stdev = 30.3853 -#> Completed at 2.3e+20 -#> Next point at 2.41831e+12 with value 250.948 and continue = 0 -#> search[ 0.23 ] = 250.946(30.3841) -#> search[ 2.3 ] = 250.947(30.3849) -#> search[ 23 ] = 250.947(30.3852) -#> search[ 230 ] = 250.948(30.3853) -#> search[ 2300 ] = 250.948(30.3853) -#> search[ 23000 ] = 250.948(30.3853) -#> search[ 230000 ] = 250.948(30.3853) -#> search[ 2.3e+06 ] = 250.948(30.3853) -#> search[ 2.3e+07 ] = 250.948(30.3853) -#> search[ 2.3e+08 ] = 250.948(30.3853) -#> search[ 2.3e+09 ] = 250.948(30.3853) -#> search[ 2.3e+10 ] = 250.948(30.3853) -#> search[ 2.3e+11 ] = 250.948(30.3853) -#> search[ 2.3e+12 ] = 250.948(30.3853) -#> search[ 2.3e+13 ] = 250.948(30.3853) -#> search[ 2.3e+14 ] = 250.948(30.3853) -#> search[ 2.3e+15 ] = 250.948(30.3853) -#> search[ 2.3e+16 ] = 250.948(30.3853) -#> search[ 2.3e+17 ] = 250.948(30.3853) -#> search[ 2.3e+18 ] = 250.948(30.3853) -#> search[ 2.3e+19 ] = 250.948(30.3853) -#> search[ 2.3e+20 ] = 250.948(30.3853) -#> -#> -#> Maximum predicted log likelihood (250.948) estimated at: -#> 2.41831e+12 (variance) -#> 9.09409e-07 (lambda) +#> Starting var = 0.241 (default) +#> Running at Laplace(2.88076) None Grid-point #1 at 0.241 Fold #1 Rep #1 pred log like = 558.834 +#> Running at Laplace(2.88076) None Grid-point #1 at 0.241 Fold #2 Rep #1 pred log like = 629.538 +#> Running at Laplace(2.88076) None Grid-point #1 at 0.241 Fold #3 Rep #1 pred log like = 578.237 +#> Running at Laplace(2.88076) None Grid-point #1 at 0.241 Fold #4 Rep #1 pred log like = 557.823 +#> Running at Laplace(2.88076) None Grid-point #1 at 0.241 Fold #5 Rep #1 pred log like = 639.232 +#> Running at Laplace(2.88076) None Grid-point #1 at 0.241 Fold #6 Rep #1 pred log like = 660.216 +#> Running at Laplace(2.88076) None Grid-point #1 at 0.241 Fold #7 Rep #1 pred log like = 493.902 +#> Running at Laplace(2.88076) None Grid-point #1 at 0.241 Fold #8 Rep #1 pred log like = 647.66 +#> Running at Laplace(2.88076) None Grid-point #1 at 0.241 Fold #9 Rep #1 pred log like = 873.862 +#> Running at Laplace(2.88076) None Grid-point #1 at 0.241 Fold #10 Rep #1 pred log like = 578.915 +#> AvgPred = 621.822 with stdev = 97.0547 +#> Completed at 0.241 +#> Next point at 2.41 with value 0 and continue = 1 +#> search[ 0.241 ] = 621.822(97.0547) +#> +#> Running at Laplace(0.910975) None Grid-point #2 at 2.41 Fold #1 Rep #1 pred log like = 558.859 +#> Running at Laplace(0.910975) None Grid-point #2 at 2.41 Fold #2 Rep #1 pred log like = 629.492 +#> Running at Laplace(0.910975) None Grid-point #2 at 2.41 Fold #3 Rep #1 pred log like = 578.231 +#> Running at Laplace(0.910975) None Grid-point #2 at 2.41 Fold #4 Rep #1 pred log like = 557.829 +#> Running at Laplace(0.910975) None Grid-point #2 at 2.41 Fold #5 Rep #1 pred log like = 639.243 +#> Running at Laplace(0.910975) None Grid-point #2 at 2.41 Fold #6 Rep #1 pred log like = 660.233 +#> Running at Laplace(0.910975) None Grid-point #2 at 2.41 Fold #7 Rep #1 pred log like = 493.917 +#> Running at Laplace(0.910975) None Grid-point #2 at 2.41 Fold #8 Rep #1 pred log like = 647.677 +#> Running at Laplace(0.910975) None Grid-point #2 at 2.41 Fold #9 Rep #1 pred log like = 873.817 +#> Running at Laplace(0.910975) None Grid-point #2 at 2.41 Fold #10 Rep #1 pred log like = 578.913 +#> AvgPred = 621.821 with stdev = 97.0402 +#> Completed at 2.41 +#> Next point at 0.0241 with value 0 and continue = 1 +#> search[ 0.241 ] = 621.822(97.0547) +#> search[ 2.41 ] = 621.821(97.0402) +#> +#> Running at Laplace(9.10975) None Grid-point #3 at 0.0241 Fold #1 Rep #1 pred log like = 558.791 +#> Running at Laplace(9.10975) None Grid-point #3 at 0.0241 Fold #2 Rep #1 pred log like = 629.679 +#> Running at Laplace(9.10975) None Grid-point #3 at 0.0241 Fold #3 Rep #1 pred log like = 578.253 +#> Running at Laplace(9.10975) None Grid-point #3 at 0.0241 Fold #4 Rep #1 pred log like = 557.797 +#> Running at Laplace(9.10975) None Grid-point #3 at 0.0241 Fold #5 Rep #1 pred log like = 639.192 +#> Running at Laplace(9.10975) None Grid-point #3 at 0.0241 Fold #6 Rep #1 pred log like = 660.188 +#> Running at Laplace(9.10975) None Grid-point #3 at 0.0241 Fold #7 Rep #1 pred log like = 493.85 +#> Running at Laplace(9.10975) None Grid-point #3 at 0.0241 Fold #8 Rep #1 pred log like = 647.622 +#> Running at Laplace(9.10975) None Grid-point #3 at 0.0241 Fold #9 Rep #1 pred log like = 873.997 +#> Running at Laplace(9.10975) None Grid-point #3 at 0.0241 Fold #10 Rep #1 pred log like = 578.914 +#> AvgPred = 621.828 with stdev = 97.0986 +#> Completed at 0.0241 +#> Next point at 0.00241 with value 0 and continue = 1 +#> search[ 0.0241 ] = 621.828(97.0986) +#> search[ 0.241 ] = 621.822(97.0547) +#> search[ 2.41 ] = 621.821(97.0402) +#> +#> Running at Laplace(28.8076) None Grid-point #4 at 0.00241 Fold #1 Rep #1 pred log like = 558.629 +#> Running at Laplace(28.8076) None Grid-point #4 at 0.00241 Fold #2 Rep #1 pred log like = 630.036 +#> Running at Laplace(28.8076) None Grid-point #4 at 0.00241 Fold #3 Rep #1 pred log like = 578.386 +#> Running at Laplace(28.8076) None Grid-point #4 at 0.00241 Fold #4 Rep #1 pred log like = 557.741 +#> Running at Laplace(28.8076) None Grid-point #4 at 0.00241 Fold #5 Rep #1 pred log like = 638.953 +#> Running at Laplace(28.8076) None Grid-point #4 at 0.00241 Fold #6 Rep #1 pred log like = 660.184 +#> Running at Laplace(28.8076) None Grid-point #4 at 0.00241 Fold #7 Rep #1 pred log like = 493.637 +#> Running at Laplace(28.8076) None Grid-point #4 at 0.00241 Fold #8 Rep #1 pred log like = 647.6 +#> Running at Laplace(28.8076) None Grid-point #4 at 0.00241 Fold #9 Rep #1 pred log like = 874.31 +#> Running at Laplace(28.8076) None Grid-point #4 at 0.00241 Fold #10 Rep #1 pred log like = 578.792 +#> AvgPred = 621.827 with stdev = 97.2197 +#> Completed at 0.00241 +#> Next point at 0.0010937 with value 621.827 and continue = 0 +#> search[ 0.00241 ] = 621.827(97.2197) +#> search[ 0.0241 ] = 621.828(97.0986) +#> search[ 0.241 ] = 621.822(97.0547) +#> search[ 2.41 ] = 621.821(97.0402) +#> +#> +#> Maximum predicted log likelihood (621.827) estimated at: +#> 0.0010937 (variance) +#> 42.7628 (lambda) #> #> Fitting model at optimal hyperparameter -#> Using prior: Laplace(9.09409e-07) None +#> Using prior: Laplace(42.7628) None #Find out what the optimal hyperparameter was: getHyperParameter(fit) -#> [1] 2.418308e+12 +#> [1] 0.0010937 #Extract the current log-likelihood, and coefficients logLik(fit) -#> 'log Lik.' -1953.765 (df=3) +#> 'log Lik.' -2134.836 (df=3) coef(fit) #> (Intercept) 1 2 -#> -4.19783727 0.30746087 0.02797239 +#> -3.70113314 0.01674055 0.00000000 #We can only retrieve the confidence interval for unregularized coefficients: confint(fit, c(0)) #> Using 1 thread(s) #> covariate 2.5 % 97.5 % evaluations -#> (Intercept) 0 -4.236526 -4.159602 22 +#> (Intercept) 0 -3.729976 -3.673209 23
diff --git a/docs/reference/createControl.html b/docs/reference/createControl.html index 6f9278ee..016b0d87 100644 --- a/docs/reference/createControl.html +++ b/docs/reference/createControl.html @@ -186,7 +186,7 @@

Examples

#Generate some simulated data:
 sim <- simulateCyclopsData(nstrata = 1, nrows = 1000, ncovars = 2, eCovarsPerRow = 0.5, 
                            model = "poisson")
-#> Sparseness = 75.05 %
+#> Sparseness = 75.6 %
 cyclopsData <- convertToCyclopsData(sim$outcomes, sim$covariates, modelType = "pr", 
                                     addIntercept = TRUE)
 #> Sorting covariates by covariateId and rowId
@@ -199,118 +199,204 @@ 

Examples

#Fit the model fit <- fitCyclopsModel(cyclopsData,prior = prior, control = control) #> Using cross-validation selector type byRow -#> Performing 10-fold cross-validation [seed = 1698757933] with data partitions of sizes 100 100 100 100 100 100 100 100 100 100 +#> Performing 10-fold cross-validation [seed = 1698789247] with data partitions of sizes 100 100 100 100 100 100 100 100 100 100 #> Using 1 thread(s) -#> Starting var = 0.2495 (default) -#> Running at Laplace(2.83126) None Grid-point #1 at 0.2495 Fold #1 Rep #1 pred log like = 693.612 -#> Running at Laplace(2.83126) None Grid-point #1 at 0.2495 Fold #2 Rep #1 pred log like = 727.871 -#> Running at Laplace(2.83126) None Grid-point #1 at 0.2495 Fold #3 Rep #1 pred log like = 856.472 -#> Running at Laplace(2.83126) None Grid-point #1 at 0.2495 Fold #4 Rep #1 pred log like = 872.52 -#> Running at Laplace(2.83126) None Grid-point #1 at 0.2495 Fold #5 Rep #1 pred log like = 757.649 -#> Running at Laplace(2.83126) None Grid-point #1 at 0.2495 Fold #6 Rep #1 pred log like = 752.08 -#> Running at Laplace(2.83126) None Grid-point #1 at 0.2495 Fold #7 Rep #1 pred log like = 777.327 -#> Running at Laplace(2.83126) None Grid-point #1 at 0.2495 Fold #8 Rep #1 pred log like = 670.9 -#> Running at Laplace(2.83126) None Grid-point #1 at 0.2495 Fold #9 Rep #1 pred log like = 778.766 -#> Running at Laplace(2.83126) None Grid-point #1 at 0.2495 Fold #10 Rep #1 pred log like = 958.317 -#> AvgPred = 784.551 with stdev = 83.2879 -#> Completed at 0.2495 -#> Next point at 2.495 with value 0 and continue = 1 -#> search[ 0.2495 ] = 784.551(83.2879) +#> Starting var = 0.244 (default) +#> Running at Laplace(2.86299) None Grid-point #1 at 0.244 Fold #1 Rep #1 pred log like = 103.184 +#> Running at Laplace(2.86299) None Grid-point #1 at 0.244 Fold #2 Rep #1 pred log like = 130.249 +#> Running at Laplace(2.86299) None Grid-point #1 at 0.244 Fold #3 Rep #1 pred log like = 160.028 +#> Running at Laplace(2.86299) None Grid-point #1 at 0.244 Fold #4 Rep #1 pred log like = 151.655 +#> Running at Laplace(2.86299) None Grid-point #1 at 0.244 Fold #5 Rep #1 pred log like = 175.354 +#> Running at Laplace(2.86299) None Grid-point #1 at 0.244 Fold #6 Rep #1 pred log like = 161.803 +#> Running at Laplace(2.86299) None Grid-point #1 at 0.244 Fold #7 Rep #1 pred log like = 130.623 +#> Running at Laplace(2.86299) None Grid-point #1 at 0.244 Fold #8 Rep #1 pred log like = 137.887 +#> Running at Laplace(2.86299) None Grid-point #1 at 0.244 Fold #9 Rep #1 pred log like = 173.734 +#> Running at Laplace(2.86299) None Grid-point #1 at 0.244 Fold #10 Rep #1 pred log like = 190.477 +#> AvgPred = 151.499 with stdev = 24.8369 +#> Completed at 0.244 +#> Next point at 2.44 with value 0 and continue = 1 +#> search[ 0.244 ] = 151.499(24.8369) #> -#> Running at Laplace(0.895323) None Grid-point #2 at 2.495 Fold #1 Rep #1 pred log like = 693.629 -#> Running at Laplace(0.895323) None Grid-point #2 at 2.495 Fold #2 Rep #1 pred log like = 727.901 -#> Running at Laplace(0.895323) None Grid-point #2 at 2.495 Fold #3 Rep #1 pred log like = 856.465 -#> Running at Laplace(0.895323) None Grid-point #2 at 2.495 Fold #4 Rep #1 pred log like = 872.541 -#> Running at Laplace(0.895323) None Grid-point #2 at 2.495 Fold #5 Rep #1 pred log like = 757.617 -#> Running at Laplace(0.895323) None Grid-point #2 at 2.495 Fold #6 Rep #1 pred log like = 752.117 -#> Running at Laplace(0.895323) None Grid-point #2 at 2.495 Fold #7 Rep #1 pred log like = 777.31 -#> Running at Laplace(0.895323) None Grid-point #2 at 2.495 Fold #8 Rep #1 pred log like = 670.913 -#> Running at Laplace(0.895323) None Grid-point #2 at 2.495 Fold #9 Rep #1 pred log like = 778.729 -#> Running at Laplace(0.895323) None Grid-point #2 at 2.495 Fold #10 Rep #1 pred log like = 958.301 -#> AvgPred = 784.552 with stdev = 83.2805 -#> Completed at 2.495 -#> Next point at 24.95 with value 0 and continue = 1 -#> search[ 0.2495 ] = 784.551(83.2879) -#> search[ 2.495 ] = 784.552(83.2805) +#> Running at Laplace(0.905357) None Grid-point #2 at 2.44 Fold #1 Rep #1 pred log like = 103.166 +#> Running at Laplace(0.905357) None Grid-point #2 at 2.44 Fold #2 Rep #1 pred log like = 130.248 +#> Running at Laplace(0.905357) None Grid-point #2 at 2.44 Fold #3 Rep #1 pred log like = 160.03 +#> Running at Laplace(0.905357) None Grid-point #2 at 2.44 Fold #4 Rep #1 pred log like = 151.647 +#> Running at Laplace(0.905357) None Grid-point #2 at 2.44 Fold #5 Rep #1 pred log like = 175.309 +#> Running at Laplace(0.905357) None Grid-point #2 at 2.44 Fold #6 Rep #1 pred log like = 161.801 +#> Running at Laplace(0.905357) None Grid-point #2 at 2.44 Fold #7 Rep #1 pred log like = 130.578 +#> Running at Laplace(0.905357) None Grid-point #2 at 2.44 Fold #8 Rep #1 pred log like = 137.837 +#> Running at Laplace(0.905357) None Grid-point #2 at 2.44 Fold #9 Rep #1 pred log like = 173.718 +#> Running at Laplace(0.905357) None Grid-point #2 at 2.44 Fold #10 Rep #1 pred log like = 190.449 +#> AvgPred = 151.478 with stdev = 24.8369 +#> Completed at 2.44 +#> Next point at 0.0244 with value 0 and continue = 1 +#> search[ 0.244 ] = 151.499(24.8369) +#> search[ 2.44 ] = 151.478(24.8369) #> -#> Running at Laplace(0.283126) None Grid-point #3 at 24.95 Fold #1 Rep #1 pred log like = 693.634 -#> Running at Laplace(0.283126) None Grid-point #3 at 24.95 Fold #2 Rep #1 pred log like = 727.911 -#> Running at Laplace(0.283126) None Grid-point #3 at 24.95 Fold #3 Rep #1 pred log like = 856.462 -#> Running at Laplace(0.283126) None Grid-point #3 at 24.95 Fold #4 Rep #1 pred log like = 872.547 -#> Running at Laplace(0.283126) None Grid-point #3 at 24.95 Fold #5 Rep #1 pred log like = 757.606 -#> Running at Laplace(0.283126) None Grid-point #3 at 24.95 Fold #6 Rep #1 pred log like = 752.129 -#> Running at Laplace(0.283126) None Grid-point #3 at 24.95 Fold #7 Rep #1 pred log like = 777.305 -#> Running at Laplace(0.283126) None Grid-point #3 at 24.95 Fold #8 Rep #1 pred log like = 670.917 -#> Running at Laplace(0.283126) None Grid-point #3 at 24.95 Fold #9 Rep #1 pred log like = 778.718 -#> Running at Laplace(0.283126) None Grid-point #3 at 24.95 Fold #10 Rep #1 pred log like = 958.296 -#> AvgPred = 784.552 with stdev = 83.2781 -#> Completed at 24.95 -#> Next point at 249.5 with value 0 and continue = 1 -#> search[ 0.2495 ] = 784.551(83.2879) -#> search[ 2.495 ] = 784.552(83.2805) -#> search[ 24.95 ] = 784.552(83.2781) +#> Running at Laplace(9.05357) None Grid-point #3 at 0.0244 Fold #1 Rep #1 pred log like = 103.24 +#> Running at Laplace(9.05357) None Grid-point #3 at 0.0244 Fold #2 Rep #1 pred log like = 130.205 +#> Running at Laplace(9.05357) None Grid-point #3 at 0.0244 Fold #3 Rep #1 pred log like = 160.006 +#> Running at Laplace(9.05357) None Grid-point #3 at 0.0244 Fold #4 Rep #1 pred log like = 151.671 +#> Running at Laplace(9.05357) None Grid-point #3 at 0.0244 Fold #5 Rep #1 pred log like = 175.49 +#> Running at Laplace(9.05357) None Grid-point #3 at 0.0244 Fold #6 Rep #1 pred log like = 161.794 +#> Running at Laplace(9.05357) None Grid-point #3 at 0.0244 Fold #7 Rep #1 pred log like = 130.755 +#> Running at Laplace(9.05357) None Grid-point #3 at 0.0244 Fold #8 Rep #1 pred log like = 138.031 +#> Running at Laplace(9.05357) None Grid-point #3 at 0.0244 Fold #9 Rep #1 pred log like = 173.692 +#> Running at Laplace(9.05357) None Grid-point #3 at 0.0244 Fold #10 Rep #1 pred log like = 190.557 +#> AvgPred = 151.544 with stdev = 24.8316 +#> Completed at 0.0244 +#> Next point at 0.00244 with value 0 and continue = 1 +#> search[ 0.0244 ] = 151.544(24.8316) +#> search[ 0.244 ] = 151.499(24.8369) +#> search[ 2.44 ] = 151.478(24.8369) #> -#> Running at Laplace(0.0895323) None Grid-point #4 at 249.5 Fold #1 Rep #1 pred log like = 693.635 -#> Running at Laplace(0.0895323) None Grid-point #4 at 249.5 Fold #2 Rep #1 pred log like = 727.913 -#> Running at Laplace(0.0895323) None Grid-point #4 at 249.5 Fold #3 Rep #1 pred log like = 856.461 -#> Running at Laplace(0.0895323) None Grid-point #4 at 249.5 Fold #4 Rep #1 pred log like = 872.549 -#> Running at Laplace(0.0895323) None Grid-point #4 at 249.5 Fold #5 Rep #1 pred log like = 757.603 -#> Running at Laplace(0.0895323) None Grid-point #4 at 249.5 Fold #6 Rep #1 pred log like = 752.132 -#> Running at Laplace(0.0895323) None Grid-point #4 at 249.5 Fold #7 Rep #1 pred log like = 777.303 -#> Running at Laplace(0.0895323) None Grid-point #4 at 249.5 Fold #8 Rep #1 pred log like = 670.918 -#> Running at Laplace(0.0895323) None Grid-point #4 at 249.5 Fold #9 Rep #1 pred log like = 778.714 -#> Running at Laplace(0.0895323) None Grid-point #4 at 249.5 Fold #10 Rep #1 pred log like = 958.294 -#> AvgPred = 784.552 with stdev = 83.2774 -#> Completed at 249.5 -#> Next point at 2495 with value 0 and continue = 1 -#> search[ 0.2495 ] = 784.551(83.2879) -#> search[ 2.495 ] = 784.552(83.2805) -#> search[ 24.95 ] = 784.552(83.2781) -#> search[ 249.5 ] = 784.552(83.2774) +#> Running at Laplace(28.6299) None Grid-point #4 at 0.00244 Fold #1 Rep #1 pred log like = 103.378 +#> Running at Laplace(28.6299) None Grid-point #4 at 0.00244 Fold #2 Rep #1 pred log like = 130.133 +#> Running at Laplace(28.6299) None Grid-point #4 at 0.00244 Fold #3 Rep #1 pred log like = 159.943 +#> Running at Laplace(28.6299) None Grid-point #4 at 0.00244 Fold #4 Rep #1 pred log like = 151.618 +#> Running at Laplace(28.6299) None Grid-point #4 at 0.00244 Fold #5 Rep #1 pred log like = 175.676 +#> Running at Laplace(28.6299) None Grid-point #4 at 0.00244 Fold #6 Rep #1 pred log like = 161.739 +#> Running at Laplace(28.6299) None Grid-point #4 at 0.00244 Fold #7 Rep #1 pred log like = 131.127 +#> Running at Laplace(28.6299) None Grid-point #4 at 0.00244 Fold #8 Rep #1 pred log like = 137.975 +#> Running at Laplace(28.6299) None Grid-point #4 at 0.00244 Fold #9 Rep #1 pred log like = 173.61 +#> Running at Laplace(28.6299) None Grid-point #4 at 0.00244 Fold #10 Rep #1 pred log like = 190.596 +#> AvgPred = 151.579 with stdev = 24.7953 +#> Completed at 0.00244 +#> Next point at 0.000244 with value 0 and continue = 1 +#> search[ 0.00244 ] = 151.579(24.7953) +#> search[ 0.0244 ] = 151.544(24.8316) +#> search[ 0.244 ] = 151.499(24.8369) +#> search[ 2.44 ] = 151.478(24.8369) #> -#> Running at Laplace(0.0283126) None Grid-point #5 at 2495 Fold #1 Rep #1 pred log like = 693.636 -#> Running at Laplace(0.0283126) None Grid-point #5 at 2495 Fold #2 Rep #1 pred log like = 727.914 -#> Running at Laplace(0.0283126) None Grid-point #5 at 2495 Fold #3 Rep #1 pred log like = 856.461 -#> Running at Laplace(0.0283126) None Grid-point #5 at 2495 Fold #4 Rep #1 pred log like = 872.55 -#> Running at Laplace(0.0283126) None Grid-point #5 at 2495 Fold #5 Rep #1 pred log like = 757.602 -#> Running at Laplace(0.0283126) None Grid-point #5 at 2495 Fold #6 Rep #1 pred log like = 752.133 -#> Running at Laplace(0.0283126) None Grid-point #5 at 2495 Fold #7 Rep #1 pred log like = 777.302 -#> Running at Laplace(0.0283126) None Grid-point #5 at 2495 Fold #8 Rep #1 pred log like = 670.918 -#> Running at Laplace(0.0283126) None Grid-point #5 at 2495 Fold #9 Rep #1 pred log like = 778.713 -#> Running at Laplace(0.0283126) None Grid-point #5 at 2495 Fold #10 Rep #1 pred log like = 958.294 -#> AvgPred = 784.552 with stdev = 83.2771 -#> Completed at 2495 -#> Next point at 146.811 with value 784.553 and continue = 0 -#> search[ 0.2495 ] = 784.551(83.2879) -#> search[ 2.495 ] = 784.552(83.2805) -#> search[ 24.95 ] = 784.552(83.2781) -#> search[ 249.5 ] = 784.552(83.2774) -#> search[ 2495 ] = 784.552(83.2771) +#> Running at Laplace(90.5357) None Grid-point #5 at 0.000244 Fold #1 Rep #1 pred log like = 103.378 +#> Running at Laplace(90.5357) None Grid-point #5 at 0.000244 Fold #2 Rep #1 pred log like = 130.133 +#> Running at Laplace(90.5357) None Grid-point #5 at 0.000244 Fold #3 Rep #1 pred log like = 159.943 +#> Running at Laplace(90.5357) None Grid-point #5 at 0.000244 Fold #4 Rep #1 pred log like = 151.618 +#> Running at Laplace(90.5357) None Grid-point #5 at 0.000244 Fold #5 Rep #1 pred log like = 175.676 +#> Running at Laplace(90.5357) None Grid-point #5 at 0.000244 Fold #6 Rep #1 pred log like = 161.739 +#> Running at Laplace(90.5357) None Grid-point #5 at 0.000244 Fold #7 Rep #1 pred log like = 131.206 +#> Running at Laplace(90.5357) None Grid-point #5 at 0.000244 Fold #8 Rep #1 pred log like = 137.975 +#> Running at Laplace(90.5357) None Grid-point #5 at 0.000244 Fold #9 Rep #1 pred log like = 173.61 +#> Running at Laplace(90.5357) None Grid-point #5 at 0.000244 Fold #10 Rep #1 pred log like = 190.596 +#> AvgPred = 151.587 with stdev = 24.7888 +#> Completed at 0.000244 +#> Next point at 2.44e-05 with value 0 and continue = 1 +#> search[ 0.000244 ] = 151.587(24.7888) +#> search[ 0.00244 ] = 151.579(24.7953) +#> search[ 0.0244 ] = 151.544(24.8316) +#> search[ 0.244 ] = 151.499(24.8369) +#> search[ 2.44 ] = 151.478(24.8369) #> +#> Running at Laplace(286.299) None Grid-point #6 at 2.44e-05 Fold #1 Rep #1 pred log like = 103.378 +#> Running at Laplace(286.299) None Grid-point #6 at 2.44e-05 Fold #2 Rep #1 pred log like = 130.133 +#> Running at Laplace(286.299) None Grid-point #6 at 2.44e-05 Fold #3 Rep #1 pred log like = 159.943 +#> Running at Laplace(286.299) None Grid-point #6 at 2.44e-05 Fold #4 Rep #1 pred log like = 151.618 +#> Running at Laplace(286.299) None Grid-point #6 at 2.44e-05 Fold #5 Rep #1 pred log like = 175.676 +#> Running at Laplace(286.299) None Grid-point #6 at 2.44e-05 Fold #6 Rep #1 pred log like = 161.739 +#> Running at Laplace(286.299) None Grid-point #6 at 2.44e-05 Fold #7 Rep #1 pred log like = 131.206 +#> Running at Laplace(286.299) None Grid-point #6 at 2.44e-05 Fold #8 Rep #1 pred log like = 137.975 +#> Running at Laplace(286.299) None Grid-point #6 at 2.44e-05 Fold #9 Rep #1 pred log like = 173.61 +#> Running at Laplace(286.299) None Grid-point #6 at 2.44e-05 Fold #10 Rep #1 pred log like = 190.596 +#> AvgPred = 151.587 with stdev = 24.7888 +#> Completed at 2.44e-05 +#> Next point at 1.62865e-05 with value 151.591 and continue = 0 +#> search[ 2.44e-05 ] = 151.587(24.7888) +#> search[ 0.000244 ] = 151.587(24.7888) +#> search[ 0.00244 ] = 151.579(24.7953) +#> search[ 0.0244 ] = 151.544(24.8316) +#> search[ 0.244 ] = 151.499(24.8369) +#> search[ 2.44 ] = 151.478(24.8369) #> -#> Maximum predicted log likelihood (784.553) estimated at: -#> 146.811 (variance) -#> 0.116718 (lambda) +#> +#> Maximum predicted log likelihood (151.591) estimated at: +#> 1.62865e-05 (variance) +#> 350.43 (lambda) #> #> Fitting model at optimal hyperparameter -#> Using prior: Laplace(0.116718) None +#> Using prior: Laplace(350.43) None #Find out what the optimal hyperparameter was: getHyperParameter(fit) -#> [1] 146.8106 +#> [1] 1.62865e-05 #Extract the current log-likelihood, and coefficients logLik(fit) -#> 'log Lik.' -2194.845 (df=3) +#> 'log Lik.' -1858.348 (df=3) coef(fit) #> (Intercept) 1 2 -#> -3.56117384 0.03211331 -0.01937822 +#> -4.261846 0.000000 0.000000 #We can only retrieve the confidence interval for unregularized coefficients: confint(fit, c(0)) #> Using 1 thread(s) +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! #> covariate 2.5 % 97.5 % evaluations -#> (Intercept) 0 -3.590514 -3.532095 22 +#> (Intercept) 0 -4.295195 -4.228855 24
diff --git a/docs/reference/createPrior.html b/docs/reference/createPrior.html index e8aaf3b1..77192583 100644 --- a/docs/reference/createPrior.html +++ b/docs/reference/createPrior.html @@ -120,7 +120,7 @@

Examples

#Generate some simulated data:
 sim <- simulateCyclopsData(nstrata = 1, nrows = 1000, ncovars = 2, eCovarsPerRow = 0.5, 
                            model = "poisson")
-#> Sparseness = 76.2 %
+#> Sparseness = 76.6 %
 cyclopsData <- convertToCyclopsData(sim$outcomes, sim$covariates, modelType = "pr", 
                                     addIntercept = TRUE)
 #> Sorting covariates by covariateId and rowId
@@ -133,81 +133,190 @@ 

Examples

#Fit the model fit <- fitCyclopsModel(cyclopsData,prior = prior, control = control) #> Using cross-validation selector type byRow -#> Performing 10-fold cross-validation [seed = 1698757934] with data partitions of sizes 100 100 100 100 100 100 100 100 100 100 +#> Performing 10-fold cross-validation [seed = 1698789248] with data partitions of sizes 100 100 100 100 100 100 100 100 100 100 #> Using 1 thread(s) -#> Starting var = 0.238 (default) -#> Running at Laplace(2.89886) None Grid-point #1 at 0.238 Fold #1 Rep #1 pred log like = 898.631 -#> Running at Laplace(2.89886) None Grid-point #1 at 0.238 Fold #2 Rep #1 pred log like = 1378.61 -#> Running at Laplace(2.89886) None Grid-point #1 at 0.238 Fold #3 Rep #1 pred log like = 1439.51 -#> Running at Laplace(2.89886) None Grid-point #1 at 0.238 Fold #4 Rep #1 pred log like = 1227.83 -#> Running at Laplace(2.89886) None Grid-point #1 at 0.238 Fold #5 Rep #1 pred log like = 1717.57 -#> Running at Laplace(2.89886) None Grid-point #1 at 0.238 Fold #6 Rep #1 pred log like = 1272.34 -#> Running at Laplace(2.89886) None Grid-point #1 at 0.238 Fold #7 Rep #1 pred log like = 1047.47 -#> Running at Laplace(2.89886) None Grid-point #1 at 0.238 Fold #8 Rep #1 pred log like = 1266.38 -#> Running at Laplace(2.89886) None Grid-point #1 at 0.238 Fold #9 Rep #1 pred log like = 1253.53 -#> Running at Laplace(2.89886) None Grid-point #1 at 0.238 Fold #10 Rep #1 pred log like = 1346.96 -#> AvgPred = 1284.88 with stdev = 208.341 -#> Completed at 0.238 -#> Next point at 2.38 with value 0 and continue = 1 -#> search[ 0.238 ] = 1284.88(208.341) -#> -#> Running at Laplace(0.916698) None Grid-point #2 at 2.38 Fold #1 Rep #1 pred log like = 898.623 -#> Running at Laplace(0.916698) None Grid-point #2 at 2.38 Fold #2 Rep #1 pred log like = 1378.57 -#> Running at Laplace(0.916698) None Grid-point #2 at 2.38 Fold #3 Rep #1 pred log like = 1439.49 -#> Running at Laplace(0.916698) None Grid-point #2 at 2.38 Fold #4 Rep #1 pred log like = 1227.81 -#> Running at Laplace(0.916698) None Grid-point #2 at 2.38 Fold #5 Rep #1 pred log like = 1717.55 -#> Running at Laplace(0.916698) None Grid-point #2 at 2.38 Fold #6 Rep #1 pred log like = 1272.36 -#> Running at Laplace(0.916698) None Grid-point #2 at 2.38 Fold #7 Rep #1 pred log like = 1047.55 -#> Running at Laplace(0.916698) None Grid-point #2 at 2.38 Fold #8 Rep #1 pred log like = 1266.43 -#> Running at Laplace(0.916698) None Grid-point #2 at 2.38 Fold #9 Rep #1 pred log like = 1253.54 -#> Running at Laplace(0.916698) None Grid-point #2 at 2.38 Fold #10 Rep #1 pred log like = 1346.91 -#> AvgPred = 1284.88 with stdev = 208.324 -#> Completed at 2.38 -#> Next point at 23.8 with value 0 and continue = 1 -#> search[ 0.238 ] = 1284.88(208.341) -#> search[ 2.38 ] = 1284.88(208.324) -#> -#> Running at Laplace(0.289886) None Grid-point #3 at 23.8 Fold #1 Rep #1 pred log like = 898.62 -#> Running at Laplace(0.289886) None Grid-point #3 at 23.8 Fold #2 Rep #1 pred log like = 1378.56 -#> Running at Laplace(0.289886) None Grid-point #3 at 23.8 Fold #3 Rep #1 pred log like = 1439.48 -#> Running at Laplace(0.289886) None Grid-point #3 at 23.8 Fold #4 Rep #1 pred log like = 1227.81 -#> Running at Laplace(0.289886) None Grid-point #3 at 23.8 Fold #5 Rep #1 pred log like = 1717.54 -#> Running at Laplace(0.289886) None Grid-point #3 at 23.8 Fold #6 Rep #1 pred log like = 1272.37 -#> Running at Laplace(0.289886) None Grid-point #3 at 23.8 Fold #7 Rep #1 pred log like = 1047.58 -#> Running at Laplace(0.289886) None Grid-point #3 at 23.8 Fold #8 Rep #1 pred log like = 1266.45 -#> Running at Laplace(0.289886) None Grid-point #3 at 23.8 Fold #9 Rep #1 pred log like = 1253.54 -#> Running at Laplace(0.289886) None Grid-point #3 at 23.8 Fold #10 Rep #1 pred log like = 1346.9 -#> AvgPred = 1284.88 with stdev = 208.318 -#> Completed at 23.8 -#> Next point at 5.37835 with value 1284.88 and continue = 0 -#> search[ 0.238 ] = 1284.88(208.341) -#> search[ 2.38 ] = 1284.88(208.324) -#> search[ 23.8 ] = 1284.88(208.318) -#> -#> -#> Maximum predicted log likelihood (1284.88) estimated at: -#> 5.37835 (variance) -#> 0.609804 (lambda) +#> Starting var = 0.234 (default) +#> Running at Laplace(2.92353) None Grid-point #1 at 0.234 Fold #1 Rep #1 pred log like = 600.677 +#> Running at Laplace(2.92353) None Grid-point #1 at 0.234 Fold #2 Rep #1 pred log like = 519.924 +#> Running at Laplace(2.92353) None Grid-point #1 at 0.234 Fold #3 Rep #1 pred log like = 621.534 +#> Running at Laplace(2.92353) None Grid-point #1 at 0.234 Fold #4 Rep #1 pred log like = 429.156 +#> Running at Laplace(2.92353) None Grid-point #1 at 0.234 Fold #5 Rep #1 pred log like = 455.987 +#> Running at Laplace(2.92353) None Grid-point #1 at 0.234 Fold #6 Rep #1 pred log like = 569.073 +#> Running at Laplace(2.92353) None Grid-point #1 at 0.234 Fold #7 Rep #1 pred log like = 445.111 +#> Running at Laplace(2.92353) None Grid-point #1 at 0.234 Fold #8 Rep #1 pred log like = 680.122 +#> Running at Laplace(2.92353) None Grid-point #1 at 0.234 Fold #9 Rep #1 pred log like = 513.724 +#> Running at Laplace(2.92353) None Grid-point #1 at 0.234 Fold #10 Rep #1 pred log like = 579.541 +#> AvgPred = 541.485 with stdev = 78.608 +#> Completed at 0.234 +#> Next point at 2.34 with value 0 and continue = 1 +#> search[ 0.234 ] = 541.485(78.608) +#> +#> Running at Laplace(0.9245) None Grid-point #2 at 2.34 Fold #1 Rep #1 pred log like = 600.62 +#> Running at Laplace(0.9245) None Grid-point #2 at 2.34 Fold #2 Rep #1 pred log like = 519.914 +#> Running at Laplace(0.9245) None Grid-point #2 at 2.34 Fold #3 Rep #1 pred log like = 621.499 +#> Running at Laplace(0.9245) None Grid-point #2 at 2.34 Fold #4 Rep #1 pred log like = 429.072 +#> Running at Laplace(0.9245) None Grid-point #2 at 2.34 Fold #5 Rep #1 pred log like = 455.985 +#> Running at Laplace(0.9245) None Grid-point #2 at 2.34 Fold #6 Rep #1 pred log like = 569.055 +#> Running at Laplace(0.9245) None Grid-point #2 at 2.34 Fold #7 Rep #1 pred log like = 445.068 +#> Running at Laplace(0.9245) None Grid-point #2 at 2.34 Fold #8 Rep #1 pred log like = 680.096 +#> Running at Laplace(0.9245) None Grid-point #2 at 2.34 Fold #9 Rep #1 pred log like = 513.724 +#> Running at Laplace(0.9245) None Grid-point #2 at 2.34 Fold #10 Rep #1 pred log like = 579.472 +#> AvgPred = 541.45 with stdev = 78.6096 +#> Completed at 2.34 +#> Next point at 0.0234 with value 0 and continue = 1 +#> search[ 0.234 ] = 541.485(78.608) +#> search[ 2.34 ] = 541.45(78.6096) +#> +#> Running at Laplace(9.245) None Grid-point #3 at 0.0234 Fold #1 Rep #1 pred log like = 600.805 +#> Running at Laplace(9.245) None Grid-point #3 at 0.0234 Fold #2 Rep #1 pred log like = 519.924 +#> Running at Laplace(9.245) None Grid-point #3 at 0.0234 Fold #3 Rep #1 pred log like = 621.649 +#> Running at Laplace(9.245) None Grid-point #3 at 0.0234 Fold #4 Rep #1 pred log like = 429.416 +#> Running at Laplace(9.245) None Grid-point #3 at 0.0234 Fold #5 Rep #1 pred log like = 456.004 +#> Running at Laplace(9.245) None Grid-point #3 at 0.0234 Fold #6 Rep #1 pred log like = 569.073 +#> Running at Laplace(9.245) None Grid-point #3 at 0.0234 Fold #7 Rep #1 pred log like = 445.152 +#> Running at Laplace(9.245) None Grid-point #3 at 0.0234 Fold #8 Rep #1 pred log like = 680.134 +#> Running at Laplace(9.245) None Grid-point #3 at 0.0234 Fold #9 Rep #1 pred log like = 513.725 +#> Running at Laplace(9.245) None Grid-point #3 at 0.0234 Fold #10 Rep #1 pred log like = 579.753 +#> AvgPred = 541.564 with stdev = 78.598 +#> Completed at 0.0234 +#> Next point at 0.00234 with value 0 and continue = 1 +#> search[ 0.0234 ] = 541.564(78.598) +#> search[ 0.234 ] = 541.485(78.608) +#> search[ 2.34 ] = 541.45(78.6096) +#> +#> Running at Laplace(29.2353) None Grid-point #4 at 0.00234 Fold #1 Rep #1 pred log like = 600.805 +#> Running at Laplace(29.2353) None Grid-point #4 at 0.00234 Fold #2 Rep #1 pred log like = 519.924 +#> Running at Laplace(29.2353) None Grid-point #4 at 0.00234 Fold #3 Rep #1 pred log like = 621.874 +#> Running at Laplace(29.2353) None Grid-point #4 at 0.00234 Fold #4 Rep #1 pred log like = 430.035 +#> Running at Laplace(29.2353) None Grid-point #4 at 0.00234 Fold #5 Rep #1 pred log like = 456.006 +#> Running at Laplace(29.2353) None Grid-point #4 at 0.00234 Fold #6 Rep #1 pred log like = 569.073 +#> Running at Laplace(29.2353) None Grid-point #4 at 0.00234 Fold #7 Rep #1 pred log like = 445.152 +#> Running at Laplace(29.2353) None Grid-point #4 at 0.00234 Fold #8 Rep #1 pred log like = 680.134 +#> Running at Laplace(29.2353) None Grid-point #4 at 0.00234 Fold #9 Rep #1 pred log like = 513.725 +#> Running at Laplace(29.2353) None Grid-point #4 at 0.00234 Fold #10 Rep #1 pred log like = 580.157 +#> AvgPred = 541.688 with stdev = 78.5522 +#> Completed at 0.00234 +#> Next point at 0.000234 with value 0 and continue = 1 +#> search[ 0.00234 ] = 541.688(78.5522) +#> search[ 0.0234 ] = 541.564(78.598) +#> search[ 0.234 ] = 541.485(78.608) +#> search[ 2.34 ] = 541.45(78.6096) +#> +#> Running at Laplace(92.45) None Grid-point #5 at 0.000234 Fold #1 Rep #1 pred log like = 600.805 +#> Running at Laplace(92.45) None Grid-point #5 at 0.000234 Fold #2 Rep #1 pred log like = 519.924 +#> Running at Laplace(92.45) None Grid-point #5 at 0.000234 Fold #3 Rep #1 pred log like = 621.874 +#> Running at Laplace(92.45) None Grid-point #5 at 0.000234 Fold #4 Rep #1 pred log like = 430.035 +#> Running at Laplace(92.45) None Grid-point #5 at 0.000234 Fold #5 Rep #1 pred log like = 456.006 +#> Running at Laplace(92.45) None Grid-point #5 at 0.000234 Fold #6 Rep #1 pred log like = 569.073 +#> Running at Laplace(92.45) None Grid-point #5 at 0.000234 Fold #7 Rep #1 pred log like = 445.152 +#> Running at Laplace(92.45) None Grid-point #5 at 0.000234 Fold #8 Rep #1 pred log like = 680.134 +#> Running at Laplace(92.45) None Grid-point #5 at 0.000234 Fold #9 Rep #1 pred log like = 513.725 +#> Running at Laplace(92.45) None Grid-point #5 at 0.000234 Fold #10 Rep #1 pred log like = 580.157 +#> AvgPred = 541.688 with stdev = 78.5522 +#> Completed at 0.000234 +#> Next point at 3.23147e-23 with value 542.287 and continue = 0 +#> search[ 0.000234 ] = 541.688(78.5522) +#> search[ 0.00234 ] = 541.688(78.5522) +#> search[ 0.0234 ] = 541.564(78.598) +#> search[ 0.234 ] = 541.485(78.608) +#> search[ 2.34 ] = 541.45(78.6096) +#> +#> +#> Maximum predicted log likelihood (542.287) estimated at: +#> 3.23147e-23 (variance) +#> 2.4878e+11 (lambda) #> #> Fitting model at optimal hyperparameter -#> Using prior: Laplace(0.609804) None +#> Using prior: Laplace(2.4878e+11) None #Find out what the optimal hyperparameter was: getHyperParameter(fit) -#> [1] 5.37835 +#> [1] 3.231474e-23 #Extract the current log-likelihood, and coefficients logLik(fit) -#> 'log Lik.' -2158.207 (df=3) +#> 'log Lik.' -2122.09 (df=3) coef(fit) #> (Intercept) 1 2 -#> -3.92974607 -0.02127371 1.41692709 +#> -3.777662 0.000000 0.000000 #We can only retrieve the confidence interval for unregularized coefficients: confint(fit, c(0)) #> Using 1 thread(s) -#> covariate 2.5 % 97.5 % evaluations -#> (Intercept) 0 -3.962925 -3.8969 22 +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> +#> Warning: BLR gradient is ill-conditioned +#> Enforcing convergence! +#> covariate 2.5 % 97.5 % evaluations +#> (Intercept) 0 -3.803731 -3.751804 24
diff --git a/docs/reference/getHyperParameter.html b/docs/reference/getHyperParameter.html index 961106f3..72672f11 100644 --- a/docs/reference/getHyperParameter.html +++ b/docs/reference/getHyperParameter.html @@ -71,7 +71,7 @@

Examples

#Generate some simulated data:
 sim <- simulateCyclopsData(nstrata = 1, nrows = 1000, ncovars = 2, eCovarsPerRow = 0.5, 
                            model = "poisson")
-#> Sparseness = 73.85 %
+#> Sparseness = 76.45 %
 cyclopsData <- convertToCyclopsData(sim$outcomes, sim$covariates, modelType = "pr", 
                                     addIntercept = TRUE)
 #> Sorting covariates by covariateId and rowId
@@ -84,594 +84,594 @@ 

Examples

#Fit the model fit <- fitCyclopsModel(cyclopsData,prior = prior, control = control) #> Using cross-validation selector type byRow -#> Performing 10-fold cross-validation [seed = 1698757937] with data partitions of sizes 100 100 100 100 100 100 100 100 100 100 +#> Performing 10-fold cross-validation [seed = 1698789251] with data partitions of sizes 100 100 100 100 100 100 100 100 100 100 #> Using 1 thread(s) -#> Starting var = 0.2615 (default) -#> Running at Laplace(2.76553) None Grid-point #1 at 0.2615 Fold #1 Rep #1 pred log like = 372.484 -#> Running at Laplace(2.76553) None Grid-point #1 at 0.2615 Fold #2 Rep #1 pred log like = 427.249 -#> Running at Laplace(2.76553) None Grid-point #1 at 0.2615 Fold #3 Rep #1 pred log like = 468.957 -#> Running at Laplace(2.76553) None Grid-point #1 at 0.2615 Fold #4 Rep #1 pred log like = 505.492 -#> Running at Laplace(2.76553) None Grid-point #1 at 0.2615 Fold #5 Rep #1 pred log like = 364.273 -#> Running at Laplace(2.76553) None Grid-point #1 at 0.2615 Fold #6 Rep #1 pred log like = 433.21 -#> Running at Laplace(2.76553) None Grid-point #1 at 0.2615 Fold #7 Rep #1 pred log like = 443.256 -#> Running at Laplace(2.76553) None Grid-point #1 at 0.2615 Fold #8 Rep #1 pred log like = 438.388 -#> Running at Laplace(2.76553) None Grid-point #1 at 0.2615 Fold #9 Rep #1 pred log like = 475.904 -#> Running at Laplace(2.76553) None Grid-point #1 at 0.2615 Fold #10 Rep #1 pred log like = 470.303 -#> AvgPred = 439.952 with stdev = 42.2492 -#> Completed at 0.2615 -#> Next point at 2.615 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) +#> Starting var = 0.2355 (default) +#> Running at Laplace(2.9142) None Grid-point #1 at 0.2355 Fold #1 Rep #1 pred log like = 1071.67 +#> Running at Laplace(2.9142) None Grid-point #1 at 0.2355 Fold #2 Rep #1 pred log like = 887.72 +#> Running at Laplace(2.9142) None Grid-point #1 at 0.2355 Fold #3 Rep #1 pred log like = 989.777 +#> Running at Laplace(2.9142) None Grid-point #1 at 0.2355 Fold #4 Rep #1 pred log like = 1248.9 +#> Running at Laplace(2.9142) None Grid-point #1 at 0.2355 Fold #5 Rep #1 pred log like = 1083.64 +#> Running at Laplace(2.9142) None Grid-point #1 at 0.2355 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(2.9142) None Grid-point #1 at 0.2355 Fold #7 Rep #1 pred log like = 1009.42 +#> Running at Laplace(2.9142) None Grid-point #1 at 0.2355 Fold #8 Rep #1 pred log like = 927.842 +#> Running at Laplace(2.9142) None Grid-point #1 at 0.2355 Fold #9 Rep #1 pred log like = 1098.02 +#> Running at Laplace(2.9142) None Grid-point #1 at 0.2355 Fold #10 Rep #1 pred log like = 1089.69 +#> AvgPred = 1049.11 with stdev = 96.3088 +#> Completed at 0.2355 +#> Next point at 2.355 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) #> -#> Running at Laplace(0.874539) None Grid-point #2 at 2.615 Fold #1 Rep #1 pred log like = 372.478 -#> Running at Laplace(0.874539) None Grid-point #2 at 2.615 Fold #2 Rep #1 pred log like = 427.302 -#> Running at Laplace(0.874539) None Grid-point #2 at 2.615 Fold #3 Rep #1 pred log like = 468.968 -#> Running at Laplace(0.874539) None Grid-point #2 at 2.615 Fold #4 Rep #1 pred log like = 505.462 -#> Running at Laplace(0.874539) None Grid-point #2 at 2.615 Fold #5 Rep #1 pred log like = 364.28 -#> Running at Laplace(0.874539) None Grid-point #2 at 2.615 Fold #6 Rep #1 pred log like = 433.206 -#> Running at Laplace(0.874539) None Grid-point #2 at 2.615 Fold #7 Rep #1 pred log like = 443.204 -#> Running at Laplace(0.874539) None Grid-point #2 at 2.615 Fold #8 Rep #1 pred log like = 438.398 -#> Running at Laplace(0.874539) None Grid-point #2 at 2.615 Fold #9 Rep #1 pred log like = 475.914 -#> Running at Laplace(0.874539) None Grid-point #2 at 2.615 Fold #10 Rep #1 pred log like = 470.313 -#> AvgPred = 439.952 with stdev = 42.2447 -#> Completed at 2.615 -#> Next point at 26.15 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) +#> Running at Laplace(0.921551) None Grid-point #2 at 2.355 Fold #1 Rep #1 pred log like = 1071.67 +#> Running at Laplace(0.921551) None Grid-point #2 at 2.355 Fold #2 Rep #1 pred log like = 887.711 +#> Running at Laplace(0.921551) None Grid-point #2 at 2.355 Fold #3 Rep #1 pred log like = 989.76 +#> Running at Laplace(0.921551) None Grid-point #2 at 2.355 Fold #4 Rep #1 pred log like = 1248.86 +#> Running at Laplace(0.921551) None Grid-point #2 at 2.355 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(0.921551) None Grid-point #2 at 2.355 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(0.921551) None Grid-point #2 at 2.355 Fold #7 Rep #1 pred log like = 1009.42 +#> Running at Laplace(0.921551) None Grid-point #2 at 2.355 Fold #8 Rep #1 pred log like = 927.82 +#> Running at Laplace(0.921551) None Grid-point #2 at 2.355 Fold #9 Rep #1 pred log like = 1098 +#> Running at Laplace(0.921551) None Grid-point #2 at 2.355 Fold #10 Rep #1 pred log like = 1089.79 +#> AvgPred = 1049.11 with stdev = 96.3073 +#> Completed at 2.355 +#> Next point at 23.55 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) #> -#> Running at Laplace(0.276553) None Grid-point #3 at 26.15 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(0.276553) None Grid-point #3 at 26.15 Fold #2 Rep #1 pred log like = 427.318 -#> Running at Laplace(0.276553) None Grid-point #3 at 26.15 Fold #3 Rep #1 pred log like = 468.971 -#> Running at Laplace(0.276553) None Grid-point #3 at 26.15 Fold #4 Rep #1 pred log like = 505.453 -#> Running at Laplace(0.276553) None Grid-point #3 at 26.15 Fold #5 Rep #1 pred log like = 364.282 -#> Running at Laplace(0.276553) None Grid-point #3 at 26.15 Fold #6 Rep #1 pred log like = 433.205 -#> Running at Laplace(0.276553) None Grid-point #3 at 26.15 Fold #7 Rep #1 pred log like = 443.188 -#> Running at Laplace(0.276553) None Grid-point #3 at 26.15 Fold #8 Rep #1 pred log like = 438.4 -#> Running at Laplace(0.276553) None Grid-point #3 at 26.15 Fold #9 Rep #1 pred log like = 475.917 -#> Running at Laplace(0.276553) None Grid-point #3 at 26.15 Fold #10 Rep #1 pred log like = 470.316 -#> AvgPred = 439.953 with stdev = 42.243 -#> Completed at 26.15 -#> Next point at 261.5 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) +#> Running at Laplace(0.29142) None Grid-point #3 at 23.55 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(0.29142) None Grid-point #3 at 23.55 Fold #2 Rep #1 pred log like = 887.709 +#> Running at Laplace(0.29142) None Grid-point #3 at 23.55 Fold #3 Rep #1 pred log like = 989.755 +#> Running at Laplace(0.29142) None Grid-point #3 at 23.55 Fold #4 Rep #1 pred log like = 1248.84 +#> Running at Laplace(0.29142) None Grid-point #3 at 23.55 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(0.29142) None Grid-point #3 at 23.55 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(0.29142) None Grid-point #3 at 23.55 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(0.29142) None Grid-point #3 at 23.55 Fold #8 Rep #1 pred log like = 927.813 +#> Running at Laplace(0.29142) None Grid-point #3 at 23.55 Fold #9 Rep #1 pred log like = 1097.99 +#> Running at Laplace(0.29142) None Grid-point #3 at 23.55 Fold #10 Rep #1 pred log like = 1089.83 +#> AvgPred = 1049.11 with stdev = 96.3071 +#> Completed at 23.55 +#> Next point at 235.5 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) #> -#> Running at Laplace(0.0874539) None Grid-point #4 at 261.5 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(0.0874539) None Grid-point #4 at 261.5 Fold #2 Rep #1 pred log like = 427.323 -#> Running at Laplace(0.0874539) None Grid-point #4 at 261.5 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(0.0874539) None Grid-point #4 at 261.5 Fold #4 Rep #1 pred log like = 505.45 -#> Running at Laplace(0.0874539) None Grid-point #4 at 261.5 Fold #5 Rep #1 pred log like = 364.282 -#> Running at Laplace(0.0874539) None Grid-point #4 at 261.5 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(0.0874539) None Grid-point #4 at 261.5 Fold #7 Rep #1 pred log like = 443.182 -#> Running at Laplace(0.0874539) None Grid-point #4 at 261.5 Fold #8 Rep #1 pred log like = 438.401 -#> Running at Laplace(0.0874539) None Grid-point #4 at 261.5 Fold #9 Rep #1 pred log like = 475.917 -#> Running at Laplace(0.0874539) None Grid-point #4 at 261.5 Fold #10 Rep #1 pred log like = 470.317 -#> AvgPred = 439.953 with stdev = 42.2425 -#> Completed at 261.5 -#> Next point at 2615 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) +#> Running at Laplace(0.0921551) None Grid-point #4 at 235.5 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(0.0921551) None Grid-point #4 at 235.5 Fold #2 Rep #1 pred log like = 887.708 +#> Running at Laplace(0.0921551) None Grid-point #4 at 235.5 Fold #3 Rep #1 pred log like = 989.753 +#> Running at Laplace(0.0921551) None Grid-point #4 at 235.5 Fold #4 Rep #1 pred log like = 1248.84 +#> Running at Laplace(0.0921551) None Grid-point #4 at 235.5 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(0.0921551) None Grid-point #4 at 235.5 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(0.0921551) None Grid-point #4 at 235.5 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(0.0921551) None Grid-point #4 at 235.5 Fold #8 Rep #1 pred log like = 927.81 +#> Running at Laplace(0.0921551) None Grid-point #4 at 235.5 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(0.0921551) None Grid-point #4 at 235.5 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 235.5 +#> Next point at 2355 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) #> -#> Running at Laplace(0.0276553) None Grid-point #5 at 2615 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(0.0276553) None Grid-point #5 at 2615 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(0.0276553) None Grid-point #5 at 2615 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(0.0276553) None Grid-point #5 at 2615 Fold #4 Rep #1 pred log like = 505.449 -#> Running at Laplace(0.0276553) None Grid-point #5 at 2615 Fold #5 Rep #1 pred log like = 364.282 -#> Running at Laplace(0.0276553) None Grid-point #5 at 2615 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(0.0276553) None Grid-point #5 at 2615 Fold #7 Rep #1 pred log like = 443.181 -#> Running at Laplace(0.0276553) None Grid-point #5 at 2615 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(0.0276553) None Grid-point #5 at 2615 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(0.0276553) None Grid-point #5 at 2615 Fold #10 Rep #1 pred log like = 470.317 -#> AvgPred = 439.953 with stdev = 42.2423 -#> Completed at 2615 -#> Next point at 26150 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) +#> Running at Laplace(0.029142) None Grid-point #5 at 2355 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(0.029142) None Grid-point #5 at 2355 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(0.029142) None Grid-point #5 at 2355 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(0.029142) None Grid-point #5 at 2355 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(0.029142) None Grid-point #5 at 2355 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(0.029142) None Grid-point #5 at 2355 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(0.029142) None Grid-point #5 at 2355 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(0.029142) None Grid-point #5 at 2355 Fold #8 Rep #1 pred log like = 927.81 +#> Running at Laplace(0.029142) None Grid-point #5 at 2355 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(0.029142) None Grid-point #5 at 2355 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2355 +#> Next point at 23550 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) #> -#> Running at Laplace(0.00874539) None Grid-point #6 at 26150 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(0.00874539) None Grid-point #6 at 26150 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(0.00874539) None Grid-point #6 at 26150 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(0.00874539) None Grid-point #6 at 26150 Fold #4 Rep #1 pred log like = 505.449 -#> Running at Laplace(0.00874539) None Grid-point #6 at 26150 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(0.00874539) None Grid-point #6 at 26150 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(0.00874539) None Grid-point #6 at 26150 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(0.00874539) None Grid-point #6 at 26150 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(0.00874539) None Grid-point #6 at 26150 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(0.00874539) None Grid-point #6 at 26150 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2423 -#> Completed at 26150 -#> Next point at 261500 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) +#> Running at Laplace(0.00921551) None Grid-point #6 at 23550 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(0.00921551) None Grid-point #6 at 23550 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(0.00921551) None Grid-point #6 at 23550 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(0.00921551) None Grid-point #6 at 23550 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(0.00921551) None Grid-point #6 at 23550 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(0.00921551) None Grid-point #6 at 23550 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(0.00921551) None Grid-point #6 at 23550 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(0.00921551) None Grid-point #6 at 23550 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(0.00921551) None Grid-point #6 at 23550 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(0.00921551) None Grid-point #6 at 23550 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 23550 +#> Next point at 235500 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) #> -#> Running at Laplace(0.00276553) None Grid-point #7 at 261500 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(0.00276553) None Grid-point #7 at 261500 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(0.00276553) None Grid-point #7 at 261500 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(0.00276553) None Grid-point #7 at 261500 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(0.00276553) None Grid-point #7 at 261500 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(0.00276553) None Grid-point #7 at 261500 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(0.00276553) None Grid-point #7 at 261500 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(0.00276553) None Grid-point #7 at 261500 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(0.00276553) None Grid-point #7 at 261500 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(0.00276553) None Grid-point #7 at 261500 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 261500 -#> Next point at 2.615e+06 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) +#> Running at Laplace(0.0029142) None Grid-point #7 at 235500 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(0.0029142) None Grid-point #7 at 235500 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(0.0029142) None Grid-point #7 at 235500 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(0.0029142) None Grid-point #7 at 235500 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(0.0029142) None Grid-point #7 at 235500 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(0.0029142) None Grid-point #7 at 235500 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(0.0029142) None Grid-point #7 at 235500 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(0.0029142) None Grid-point #7 at 235500 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(0.0029142) None Grid-point #7 at 235500 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(0.0029142) None Grid-point #7 at 235500 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 235500 +#> Next point at 2.355e+06 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) #> -#> Running at Laplace(0.000874539) None Grid-point #8 at 2.615e+06 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(0.000874539) None Grid-point #8 at 2.615e+06 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(0.000874539) None Grid-point #8 at 2.615e+06 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(0.000874539) None Grid-point #8 at 2.615e+06 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(0.000874539) None Grid-point #8 at 2.615e+06 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(0.000874539) None Grid-point #8 at 2.615e+06 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(0.000874539) None Grid-point #8 at 2.615e+06 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(0.000874539) None Grid-point #8 at 2.615e+06 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(0.000874539) None Grid-point #8 at 2.615e+06 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(0.000874539) None Grid-point #8 at 2.615e+06 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+06 -#> Next point at 2.615e+07 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) +#> Running at Laplace(0.000921551) None Grid-point #8 at 2.355e+06 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(0.000921551) None Grid-point #8 at 2.355e+06 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(0.000921551) None Grid-point #8 at 2.355e+06 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(0.000921551) None Grid-point #8 at 2.355e+06 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(0.000921551) None Grid-point #8 at 2.355e+06 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(0.000921551) None Grid-point #8 at 2.355e+06 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(0.000921551) None Grid-point #8 at 2.355e+06 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(0.000921551) None Grid-point #8 at 2.355e+06 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(0.000921551) None Grid-point #8 at 2.355e+06 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(0.000921551) None Grid-point #8 at 2.355e+06 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+06 +#> Next point at 2.355e+07 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) #> -#> Running at Laplace(0.000276553) None Grid-point #9 at 2.615e+07 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(0.000276553) None Grid-point #9 at 2.615e+07 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(0.000276553) None Grid-point #9 at 2.615e+07 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(0.000276553) None Grid-point #9 at 2.615e+07 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(0.000276553) None Grid-point #9 at 2.615e+07 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(0.000276553) None Grid-point #9 at 2.615e+07 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(0.000276553) None Grid-point #9 at 2.615e+07 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(0.000276553) None Grid-point #9 at 2.615e+07 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(0.000276553) None Grid-point #9 at 2.615e+07 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(0.000276553) None Grid-point #9 at 2.615e+07 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+07 -#> Next point at 2.615e+08 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) -#> search[ 2.615e+07 ] = 439.953(42.2422) +#> Running at Laplace(0.00029142) None Grid-point #9 at 2.355e+07 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(0.00029142) None Grid-point #9 at 2.355e+07 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(0.00029142) None Grid-point #9 at 2.355e+07 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(0.00029142) None Grid-point #9 at 2.355e+07 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(0.00029142) None Grid-point #9 at 2.355e+07 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(0.00029142) None Grid-point #9 at 2.355e+07 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(0.00029142) None Grid-point #9 at 2.355e+07 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(0.00029142) None Grid-point #9 at 2.355e+07 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(0.00029142) None Grid-point #9 at 2.355e+07 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(0.00029142) None Grid-point #9 at 2.355e+07 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+07 +#> Next point at 2.355e+08 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) +#> search[ 2.355e+07 ] = 1049.11(96.307) #> -#> Running at Laplace(8.74539e-05) None Grid-point #10 at 2.615e+08 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(8.74539e-05) None Grid-point #10 at 2.615e+08 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(8.74539e-05) None Grid-point #10 at 2.615e+08 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(8.74539e-05) None Grid-point #10 at 2.615e+08 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(8.74539e-05) None Grid-point #10 at 2.615e+08 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(8.74539e-05) None Grid-point #10 at 2.615e+08 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(8.74539e-05) None Grid-point #10 at 2.615e+08 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(8.74539e-05) None Grid-point #10 at 2.615e+08 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(8.74539e-05) None Grid-point #10 at 2.615e+08 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(8.74539e-05) None Grid-point #10 at 2.615e+08 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+08 -#> Next point at 2.615e+09 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) -#> search[ 2.615e+07 ] = 439.953(42.2422) -#> search[ 2.615e+08 ] = 439.953(42.2422) +#> Running at Laplace(9.21551e-05) None Grid-point #10 at 2.355e+08 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(9.21551e-05) None Grid-point #10 at 2.355e+08 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(9.21551e-05) None Grid-point #10 at 2.355e+08 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(9.21551e-05) None Grid-point #10 at 2.355e+08 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(9.21551e-05) None Grid-point #10 at 2.355e+08 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(9.21551e-05) None Grid-point #10 at 2.355e+08 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(9.21551e-05) None Grid-point #10 at 2.355e+08 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(9.21551e-05) None Grid-point #10 at 2.355e+08 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(9.21551e-05) None Grid-point #10 at 2.355e+08 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(9.21551e-05) None Grid-point #10 at 2.355e+08 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+08 +#> Next point at 2.355e+09 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) +#> search[ 2.355e+07 ] = 1049.11(96.307) +#> search[ 2.355e+08 ] = 1049.11(96.307) #> -#> Running at Laplace(2.76553e-05) None Grid-point #11 at 2.615e+09 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(2.76553e-05) None Grid-point #11 at 2.615e+09 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(2.76553e-05) None Grid-point #11 at 2.615e+09 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(2.76553e-05) None Grid-point #11 at 2.615e+09 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(2.76553e-05) None Grid-point #11 at 2.615e+09 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(2.76553e-05) None Grid-point #11 at 2.615e+09 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(2.76553e-05) None Grid-point #11 at 2.615e+09 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(2.76553e-05) None Grid-point #11 at 2.615e+09 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(2.76553e-05) None Grid-point #11 at 2.615e+09 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(2.76553e-05) None Grid-point #11 at 2.615e+09 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+09 -#> Next point at 2.615e+10 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) -#> search[ 2.615e+07 ] = 439.953(42.2422) -#> search[ 2.615e+08 ] = 439.953(42.2422) -#> search[ 2.615e+09 ] = 439.953(42.2422) +#> Running at Laplace(2.9142e-05) None Grid-point #11 at 2.355e+09 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(2.9142e-05) None Grid-point #11 at 2.355e+09 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(2.9142e-05) None Grid-point #11 at 2.355e+09 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(2.9142e-05) None Grid-point #11 at 2.355e+09 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(2.9142e-05) None Grid-point #11 at 2.355e+09 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(2.9142e-05) None Grid-point #11 at 2.355e+09 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(2.9142e-05) None Grid-point #11 at 2.355e+09 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(2.9142e-05) None Grid-point #11 at 2.355e+09 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(2.9142e-05) None Grid-point #11 at 2.355e+09 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(2.9142e-05) None Grid-point #11 at 2.355e+09 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+09 +#> Next point at 2.355e+10 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) +#> search[ 2.355e+07 ] = 1049.11(96.307) +#> search[ 2.355e+08 ] = 1049.11(96.307) +#> search[ 2.355e+09 ] = 1049.11(96.307) #> -#> Running at Laplace(8.74539e-06) None Grid-point #12 at 2.615e+10 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(8.74539e-06) None Grid-point #12 at 2.615e+10 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(8.74539e-06) None Grid-point #12 at 2.615e+10 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(8.74539e-06) None Grid-point #12 at 2.615e+10 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(8.74539e-06) None Grid-point #12 at 2.615e+10 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(8.74539e-06) None Grid-point #12 at 2.615e+10 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(8.74539e-06) None Grid-point #12 at 2.615e+10 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(8.74539e-06) None Grid-point #12 at 2.615e+10 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(8.74539e-06) None Grid-point #12 at 2.615e+10 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(8.74539e-06) None Grid-point #12 at 2.615e+10 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+10 -#> Next point at 2.615e+11 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) -#> search[ 2.615e+07 ] = 439.953(42.2422) -#> search[ 2.615e+08 ] = 439.953(42.2422) -#> search[ 2.615e+09 ] = 439.953(42.2422) -#> search[ 2.615e+10 ] = 439.953(42.2422) +#> Running at Laplace(9.21551e-06) None Grid-point #12 at 2.355e+10 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(9.21551e-06) None Grid-point #12 at 2.355e+10 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(9.21551e-06) None Grid-point #12 at 2.355e+10 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(9.21551e-06) None Grid-point #12 at 2.355e+10 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(9.21551e-06) None Grid-point #12 at 2.355e+10 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(9.21551e-06) None Grid-point #12 at 2.355e+10 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(9.21551e-06) None Grid-point #12 at 2.355e+10 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(9.21551e-06) None Grid-point #12 at 2.355e+10 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(9.21551e-06) None Grid-point #12 at 2.355e+10 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(9.21551e-06) None Grid-point #12 at 2.355e+10 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+10 +#> Next point at 2.355e+11 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) +#> search[ 2.355e+07 ] = 1049.11(96.307) +#> search[ 2.355e+08 ] = 1049.11(96.307) +#> search[ 2.355e+09 ] = 1049.11(96.307) +#> search[ 2.355e+10 ] = 1049.11(96.307) #> -#> Running at Laplace(2.76553e-06) None Grid-point #13 at 2.615e+11 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(2.76553e-06) None Grid-point #13 at 2.615e+11 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(2.76553e-06) None Grid-point #13 at 2.615e+11 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(2.76553e-06) None Grid-point #13 at 2.615e+11 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(2.76553e-06) None Grid-point #13 at 2.615e+11 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(2.76553e-06) None Grid-point #13 at 2.615e+11 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(2.76553e-06) None Grid-point #13 at 2.615e+11 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(2.76553e-06) None Grid-point #13 at 2.615e+11 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(2.76553e-06) None Grid-point #13 at 2.615e+11 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(2.76553e-06) None Grid-point #13 at 2.615e+11 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+11 -#> Next point at 2.615e+12 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) -#> search[ 2.615e+07 ] = 439.953(42.2422) -#> search[ 2.615e+08 ] = 439.953(42.2422) -#> search[ 2.615e+09 ] = 439.953(42.2422) -#> search[ 2.615e+10 ] = 439.953(42.2422) -#> search[ 2.615e+11 ] = 439.953(42.2422) +#> Running at Laplace(2.9142e-06) None Grid-point #13 at 2.355e+11 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(2.9142e-06) None Grid-point #13 at 2.355e+11 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(2.9142e-06) None Grid-point #13 at 2.355e+11 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(2.9142e-06) None Grid-point #13 at 2.355e+11 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(2.9142e-06) None Grid-point #13 at 2.355e+11 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(2.9142e-06) None Grid-point #13 at 2.355e+11 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(2.9142e-06) None Grid-point #13 at 2.355e+11 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(2.9142e-06) None Grid-point #13 at 2.355e+11 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(2.9142e-06) None Grid-point #13 at 2.355e+11 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(2.9142e-06) None Grid-point #13 at 2.355e+11 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+11 +#> Next point at 2.355e+12 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) +#> search[ 2.355e+07 ] = 1049.11(96.307) +#> search[ 2.355e+08 ] = 1049.11(96.307) +#> search[ 2.355e+09 ] = 1049.11(96.307) +#> search[ 2.355e+10 ] = 1049.11(96.307) +#> search[ 2.355e+11 ] = 1049.11(96.307) #> -#> Running at Laplace(8.74539e-07) None Grid-point #14 at 2.615e+12 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(8.74539e-07) None Grid-point #14 at 2.615e+12 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(8.74539e-07) None Grid-point #14 at 2.615e+12 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(8.74539e-07) None Grid-point #14 at 2.615e+12 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(8.74539e-07) None Grid-point #14 at 2.615e+12 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(8.74539e-07) None Grid-point #14 at 2.615e+12 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(8.74539e-07) None Grid-point #14 at 2.615e+12 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(8.74539e-07) None Grid-point #14 at 2.615e+12 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(8.74539e-07) None Grid-point #14 at 2.615e+12 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(8.74539e-07) None Grid-point #14 at 2.615e+12 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+12 -#> Next point at 2.615e+13 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) -#> search[ 2.615e+07 ] = 439.953(42.2422) -#> search[ 2.615e+08 ] = 439.953(42.2422) -#> search[ 2.615e+09 ] = 439.953(42.2422) -#> search[ 2.615e+10 ] = 439.953(42.2422) -#> search[ 2.615e+11 ] = 439.953(42.2422) -#> search[ 2.615e+12 ] = 439.953(42.2422) +#> Running at Laplace(9.21551e-07) None Grid-point #14 at 2.355e+12 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(9.21551e-07) None Grid-point #14 at 2.355e+12 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(9.21551e-07) None Grid-point #14 at 2.355e+12 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(9.21551e-07) None Grid-point #14 at 2.355e+12 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(9.21551e-07) None Grid-point #14 at 2.355e+12 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(9.21551e-07) None Grid-point #14 at 2.355e+12 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(9.21551e-07) None Grid-point #14 at 2.355e+12 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(9.21551e-07) None Grid-point #14 at 2.355e+12 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(9.21551e-07) None Grid-point #14 at 2.355e+12 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(9.21551e-07) None Grid-point #14 at 2.355e+12 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+12 +#> Next point at 2.355e+13 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) +#> search[ 2.355e+07 ] = 1049.11(96.307) +#> search[ 2.355e+08 ] = 1049.11(96.307) +#> search[ 2.355e+09 ] = 1049.11(96.307) +#> search[ 2.355e+10 ] = 1049.11(96.307) +#> search[ 2.355e+11 ] = 1049.11(96.307) +#> search[ 2.355e+12 ] = 1049.11(96.307) #> -#> Running at Laplace(2.76553e-07) None Grid-point #15 at 2.615e+13 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(2.76553e-07) None Grid-point #15 at 2.615e+13 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(2.76553e-07) None Grid-point #15 at 2.615e+13 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(2.76553e-07) None Grid-point #15 at 2.615e+13 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(2.76553e-07) None Grid-point #15 at 2.615e+13 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(2.76553e-07) None Grid-point #15 at 2.615e+13 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(2.76553e-07) None Grid-point #15 at 2.615e+13 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(2.76553e-07) None Grid-point #15 at 2.615e+13 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(2.76553e-07) None Grid-point #15 at 2.615e+13 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(2.76553e-07) None Grid-point #15 at 2.615e+13 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+13 -#> Next point at 2.615e+14 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) -#> search[ 2.615e+07 ] = 439.953(42.2422) -#> search[ 2.615e+08 ] = 439.953(42.2422) -#> search[ 2.615e+09 ] = 439.953(42.2422) -#> search[ 2.615e+10 ] = 439.953(42.2422) -#> search[ 2.615e+11 ] = 439.953(42.2422) -#> search[ 2.615e+12 ] = 439.953(42.2422) -#> search[ 2.615e+13 ] = 439.953(42.2422) +#> Running at Laplace(2.9142e-07) None Grid-point #15 at 2.355e+13 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(2.9142e-07) None Grid-point #15 at 2.355e+13 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(2.9142e-07) None Grid-point #15 at 2.355e+13 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(2.9142e-07) None Grid-point #15 at 2.355e+13 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(2.9142e-07) None Grid-point #15 at 2.355e+13 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(2.9142e-07) None Grid-point #15 at 2.355e+13 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(2.9142e-07) None Grid-point #15 at 2.355e+13 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(2.9142e-07) None Grid-point #15 at 2.355e+13 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(2.9142e-07) None Grid-point #15 at 2.355e+13 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(2.9142e-07) None Grid-point #15 at 2.355e+13 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+13 +#> Next point at 2.355e+14 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) +#> search[ 2.355e+07 ] = 1049.11(96.307) +#> search[ 2.355e+08 ] = 1049.11(96.307) +#> search[ 2.355e+09 ] = 1049.11(96.307) +#> search[ 2.355e+10 ] = 1049.11(96.307) +#> search[ 2.355e+11 ] = 1049.11(96.307) +#> search[ 2.355e+12 ] = 1049.11(96.307) +#> search[ 2.355e+13 ] = 1049.11(96.307) #> -#> Running at Laplace(8.74539e-08) None Grid-point #16 at 2.615e+14 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(8.74539e-08) None Grid-point #16 at 2.615e+14 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(8.74539e-08) None Grid-point #16 at 2.615e+14 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(8.74539e-08) None Grid-point #16 at 2.615e+14 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(8.74539e-08) None Grid-point #16 at 2.615e+14 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(8.74539e-08) None Grid-point #16 at 2.615e+14 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(8.74539e-08) None Grid-point #16 at 2.615e+14 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(8.74539e-08) None Grid-point #16 at 2.615e+14 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(8.74539e-08) None Grid-point #16 at 2.615e+14 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(8.74539e-08) None Grid-point #16 at 2.615e+14 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+14 -#> Next point at 2.615e+15 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) -#> search[ 2.615e+07 ] = 439.953(42.2422) -#> search[ 2.615e+08 ] = 439.953(42.2422) -#> search[ 2.615e+09 ] = 439.953(42.2422) -#> search[ 2.615e+10 ] = 439.953(42.2422) -#> search[ 2.615e+11 ] = 439.953(42.2422) -#> search[ 2.615e+12 ] = 439.953(42.2422) -#> search[ 2.615e+13 ] = 439.953(42.2422) -#> search[ 2.615e+14 ] = 439.953(42.2422) +#> Running at Laplace(9.21551e-08) None Grid-point #16 at 2.355e+14 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(9.21551e-08) None Grid-point #16 at 2.355e+14 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(9.21551e-08) None Grid-point #16 at 2.355e+14 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(9.21551e-08) None Grid-point #16 at 2.355e+14 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(9.21551e-08) None Grid-point #16 at 2.355e+14 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(9.21551e-08) None Grid-point #16 at 2.355e+14 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(9.21551e-08) None Grid-point #16 at 2.355e+14 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(9.21551e-08) None Grid-point #16 at 2.355e+14 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(9.21551e-08) None Grid-point #16 at 2.355e+14 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(9.21551e-08) None Grid-point #16 at 2.355e+14 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+14 +#> Next point at 2.355e+15 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) +#> search[ 2.355e+07 ] = 1049.11(96.307) +#> search[ 2.355e+08 ] = 1049.11(96.307) +#> search[ 2.355e+09 ] = 1049.11(96.307) +#> search[ 2.355e+10 ] = 1049.11(96.307) +#> search[ 2.355e+11 ] = 1049.11(96.307) +#> search[ 2.355e+12 ] = 1049.11(96.307) +#> search[ 2.355e+13 ] = 1049.11(96.307) +#> search[ 2.355e+14 ] = 1049.11(96.307) #> -#> Running at Laplace(2.76553e-08) None Grid-point #17 at 2.615e+15 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(2.76553e-08) None Grid-point #17 at 2.615e+15 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(2.76553e-08) None Grid-point #17 at 2.615e+15 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(2.76553e-08) None Grid-point #17 at 2.615e+15 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(2.76553e-08) None Grid-point #17 at 2.615e+15 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(2.76553e-08) None Grid-point #17 at 2.615e+15 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(2.76553e-08) None Grid-point #17 at 2.615e+15 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(2.76553e-08) None Grid-point #17 at 2.615e+15 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(2.76553e-08) None Grid-point #17 at 2.615e+15 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(2.76553e-08) None Grid-point #17 at 2.615e+15 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+15 -#> Next point at 2.615e+16 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) -#> search[ 2.615e+07 ] = 439.953(42.2422) -#> search[ 2.615e+08 ] = 439.953(42.2422) -#> search[ 2.615e+09 ] = 439.953(42.2422) -#> search[ 2.615e+10 ] = 439.953(42.2422) -#> search[ 2.615e+11 ] = 439.953(42.2422) -#> search[ 2.615e+12 ] = 439.953(42.2422) -#> search[ 2.615e+13 ] = 439.953(42.2422) -#> search[ 2.615e+14 ] = 439.953(42.2422) -#> search[ 2.615e+15 ] = 439.953(42.2422) +#> Running at Laplace(2.9142e-08) None Grid-point #17 at 2.355e+15 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(2.9142e-08) None Grid-point #17 at 2.355e+15 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(2.9142e-08) None Grid-point #17 at 2.355e+15 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(2.9142e-08) None Grid-point #17 at 2.355e+15 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(2.9142e-08) None Grid-point #17 at 2.355e+15 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(2.9142e-08) None Grid-point #17 at 2.355e+15 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(2.9142e-08) None Grid-point #17 at 2.355e+15 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(2.9142e-08) None Grid-point #17 at 2.355e+15 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(2.9142e-08) None Grid-point #17 at 2.355e+15 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(2.9142e-08) None Grid-point #17 at 2.355e+15 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+15 +#> Next point at 2.355e+16 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) +#> search[ 2.355e+07 ] = 1049.11(96.307) +#> search[ 2.355e+08 ] = 1049.11(96.307) +#> search[ 2.355e+09 ] = 1049.11(96.307) +#> search[ 2.355e+10 ] = 1049.11(96.307) +#> search[ 2.355e+11 ] = 1049.11(96.307) +#> search[ 2.355e+12 ] = 1049.11(96.307) +#> search[ 2.355e+13 ] = 1049.11(96.307) +#> search[ 2.355e+14 ] = 1049.11(96.307) +#> search[ 2.355e+15 ] = 1049.11(96.307) #> -#> Running at Laplace(8.74539e-09) None Grid-point #18 at 2.615e+16 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(8.74539e-09) None Grid-point #18 at 2.615e+16 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(8.74539e-09) None Grid-point #18 at 2.615e+16 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(8.74539e-09) None Grid-point #18 at 2.615e+16 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(8.74539e-09) None Grid-point #18 at 2.615e+16 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(8.74539e-09) None Grid-point #18 at 2.615e+16 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(8.74539e-09) None Grid-point #18 at 2.615e+16 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(8.74539e-09) None Grid-point #18 at 2.615e+16 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(8.74539e-09) None Grid-point #18 at 2.615e+16 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(8.74539e-09) None Grid-point #18 at 2.615e+16 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+16 -#> Next point at 2.615e+17 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) -#> search[ 2.615e+07 ] = 439.953(42.2422) -#> search[ 2.615e+08 ] = 439.953(42.2422) -#> search[ 2.615e+09 ] = 439.953(42.2422) -#> search[ 2.615e+10 ] = 439.953(42.2422) -#> search[ 2.615e+11 ] = 439.953(42.2422) -#> search[ 2.615e+12 ] = 439.953(42.2422) -#> search[ 2.615e+13 ] = 439.953(42.2422) -#> search[ 2.615e+14 ] = 439.953(42.2422) -#> search[ 2.615e+15 ] = 439.953(42.2422) -#> search[ 2.615e+16 ] = 439.953(42.2422) +#> Running at Laplace(9.21551e-09) None Grid-point #18 at 2.355e+16 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(9.21551e-09) None Grid-point #18 at 2.355e+16 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(9.21551e-09) None Grid-point #18 at 2.355e+16 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(9.21551e-09) None Grid-point #18 at 2.355e+16 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(9.21551e-09) None Grid-point #18 at 2.355e+16 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(9.21551e-09) None Grid-point #18 at 2.355e+16 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(9.21551e-09) None Grid-point #18 at 2.355e+16 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(9.21551e-09) None Grid-point #18 at 2.355e+16 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(9.21551e-09) None Grid-point #18 at 2.355e+16 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(9.21551e-09) None Grid-point #18 at 2.355e+16 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+16 +#> Next point at 2.355e+17 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) +#> search[ 2.355e+07 ] = 1049.11(96.307) +#> search[ 2.355e+08 ] = 1049.11(96.307) +#> search[ 2.355e+09 ] = 1049.11(96.307) +#> search[ 2.355e+10 ] = 1049.11(96.307) +#> search[ 2.355e+11 ] = 1049.11(96.307) +#> search[ 2.355e+12 ] = 1049.11(96.307) +#> search[ 2.355e+13 ] = 1049.11(96.307) +#> search[ 2.355e+14 ] = 1049.11(96.307) +#> search[ 2.355e+15 ] = 1049.11(96.307) +#> search[ 2.355e+16 ] = 1049.11(96.307) #> -#> Running at Laplace(2.76553e-09) None Grid-point #19 at 2.615e+17 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(2.76553e-09) None Grid-point #19 at 2.615e+17 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(2.76553e-09) None Grid-point #19 at 2.615e+17 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(2.76553e-09) None Grid-point #19 at 2.615e+17 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(2.76553e-09) None Grid-point #19 at 2.615e+17 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(2.76553e-09) None Grid-point #19 at 2.615e+17 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(2.76553e-09) None Grid-point #19 at 2.615e+17 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(2.76553e-09) None Grid-point #19 at 2.615e+17 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(2.76553e-09) None Grid-point #19 at 2.615e+17 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(2.76553e-09) None Grid-point #19 at 2.615e+17 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+17 -#> Next point at 2.615e+18 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) -#> search[ 2.615e+07 ] = 439.953(42.2422) -#> search[ 2.615e+08 ] = 439.953(42.2422) -#> search[ 2.615e+09 ] = 439.953(42.2422) -#> search[ 2.615e+10 ] = 439.953(42.2422) -#> search[ 2.615e+11 ] = 439.953(42.2422) -#> search[ 2.615e+12 ] = 439.953(42.2422) -#> search[ 2.615e+13 ] = 439.953(42.2422) -#> search[ 2.615e+14 ] = 439.953(42.2422) -#> search[ 2.615e+15 ] = 439.953(42.2422) -#> search[ 2.615e+16 ] = 439.953(42.2422) -#> search[ 2.615e+17 ] = 439.953(42.2422) +#> Running at Laplace(2.9142e-09) None Grid-point #19 at 2.355e+17 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(2.9142e-09) None Grid-point #19 at 2.355e+17 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(2.9142e-09) None Grid-point #19 at 2.355e+17 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(2.9142e-09) None Grid-point #19 at 2.355e+17 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(2.9142e-09) None Grid-point #19 at 2.355e+17 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(2.9142e-09) None Grid-point #19 at 2.355e+17 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(2.9142e-09) None Grid-point #19 at 2.355e+17 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(2.9142e-09) None Grid-point #19 at 2.355e+17 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(2.9142e-09) None Grid-point #19 at 2.355e+17 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(2.9142e-09) None Grid-point #19 at 2.355e+17 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+17 +#> Next point at 2.355e+18 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) +#> search[ 2.355e+07 ] = 1049.11(96.307) +#> search[ 2.355e+08 ] = 1049.11(96.307) +#> search[ 2.355e+09 ] = 1049.11(96.307) +#> search[ 2.355e+10 ] = 1049.11(96.307) +#> search[ 2.355e+11 ] = 1049.11(96.307) +#> search[ 2.355e+12 ] = 1049.11(96.307) +#> search[ 2.355e+13 ] = 1049.11(96.307) +#> search[ 2.355e+14 ] = 1049.11(96.307) +#> search[ 2.355e+15 ] = 1049.11(96.307) +#> search[ 2.355e+16 ] = 1049.11(96.307) +#> search[ 2.355e+17 ] = 1049.11(96.307) #> -#> Running at Laplace(8.74539e-10) None Grid-point #20 at 2.615e+18 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(8.74539e-10) None Grid-point #20 at 2.615e+18 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(8.74539e-10) None Grid-point #20 at 2.615e+18 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(8.74539e-10) None Grid-point #20 at 2.615e+18 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(8.74539e-10) None Grid-point #20 at 2.615e+18 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(8.74539e-10) None Grid-point #20 at 2.615e+18 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(8.74539e-10) None Grid-point #20 at 2.615e+18 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(8.74539e-10) None Grid-point #20 at 2.615e+18 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(8.74539e-10) None Grid-point #20 at 2.615e+18 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(8.74539e-10) None Grid-point #20 at 2.615e+18 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+18 -#> Next point at 2.615e+19 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) -#> search[ 2.615e+07 ] = 439.953(42.2422) -#> search[ 2.615e+08 ] = 439.953(42.2422) -#> search[ 2.615e+09 ] = 439.953(42.2422) -#> search[ 2.615e+10 ] = 439.953(42.2422) -#> search[ 2.615e+11 ] = 439.953(42.2422) -#> search[ 2.615e+12 ] = 439.953(42.2422) -#> search[ 2.615e+13 ] = 439.953(42.2422) -#> search[ 2.615e+14 ] = 439.953(42.2422) -#> search[ 2.615e+15 ] = 439.953(42.2422) -#> search[ 2.615e+16 ] = 439.953(42.2422) -#> search[ 2.615e+17 ] = 439.953(42.2422) -#> search[ 2.615e+18 ] = 439.953(42.2422) +#> Running at Laplace(9.21551e-10) None Grid-point #20 at 2.355e+18 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(9.21551e-10) None Grid-point #20 at 2.355e+18 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(9.21551e-10) None Grid-point #20 at 2.355e+18 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(9.21551e-10) None Grid-point #20 at 2.355e+18 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(9.21551e-10) None Grid-point #20 at 2.355e+18 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(9.21551e-10) None Grid-point #20 at 2.355e+18 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(9.21551e-10) None Grid-point #20 at 2.355e+18 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(9.21551e-10) None Grid-point #20 at 2.355e+18 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(9.21551e-10) None Grid-point #20 at 2.355e+18 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(9.21551e-10) None Grid-point #20 at 2.355e+18 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+18 +#> Next point at 2.355e+19 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) +#> search[ 2.355e+07 ] = 1049.11(96.307) +#> search[ 2.355e+08 ] = 1049.11(96.307) +#> search[ 2.355e+09 ] = 1049.11(96.307) +#> search[ 2.355e+10 ] = 1049.11(96.307) +#> search[ 2.355e+11 ] = 1049.11(96.307) +#> search[ 2.355e+12 ] = 1049.11(96.307) +#> search[ 2.355e+13 ] = 1049.11(96.307) +#> search[ 2.355e+14 ] = 1049.11(96.307) +#> search[ 2.355e+15 ] = 1049.11(96.307) +#> search[ 2.355e+16 ] = 1049.11(96.307) +#> search[ 2.355e+17 ] = 1049.11(96.307) +#> search[ 2.355e+18 ] = 1049.11(96.307) #> -#> Running at Laplace(2.76553e-10) None Grid-point #21 at 2.615e+19 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(2.76553e-10) None Grid-point #21 at 2.615e+19 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(2.76553e-10) None Grid-point #21 at 2.615e+19 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(2.76553e-10) None Grid-point #21 at 2.615e+19 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(2.76553e-10) None Grid-point #21 at 2.615e+19 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(2.76553e-10) None Grid-point #21 at 2.615e+19 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(2.76553e-10) None Grid-point #21 at 2.615e+19 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(2.76553e-10) None Grid-point #21 at 2.615e+19 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(2.76553e-10) None Grid-point #21 at 2.615e+19 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(2.76553e-10) None Grid-point #21 at 2.615e+19 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+19 -#> Next point at 2.615e+20 with value 0 and continue = 1 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) -#> search[ 2.615e+07 ] = 439.953(42.2422) -#> search[ 2.615e+08 ] = 439.953(42.2422) -#> search[ 2.615e+09 ] = 439.953(42.2422) -#> search[ 2.615e+10 ] = 439.953(42.2422) -#> search[ 2.615e+11 ] = 439.953(42.2422) -#> search[ 2.615e+12 ] = 439.953(42.2422) -#> search[ 2.615e+13 ] = 439.953(42.2422) -#> search[ 2.615e+14 ] = 439.953(42.2422) -#> search[ 2.615e+15 ] = 439.953(42.2422) -#> search[ 2.615e+16 ] = 439.953(42.2422) -#> search[ 2.615e+17 ] = 439.953(42.2422) -#> search[ 2.615e+18 ] = 439.953(42.2422) -#> search[ 2.615e+19 ] = 439.953(42.2422) +#> Running at Laplace(2.9142e-10) None Grid-point #21 at 2.355e+19 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(2.9142e-10) None Grid-point #21 at 2.355e+19 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(2.9142e-10) None Grid-point #21 at 2.355e+19 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(2.9142e-10) None Grid-point #21 at 2.355e+19 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(2.9142e-10) None Grid-point #21 at 2.355e+19 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(2.9142e-10) None Grid-point #21 at 2.355e+19 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(2.9142e-10) None Grid-point #21 at 2.355e+19 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(2.9142e-10) None Grid-point #21 at 2.355e+19 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(2.9142e-10) None Grid-point #21 at 2.355e+19 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(2.9142e-10) None Grid-point #21 at 2.355e+19 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+19 +#> Next point at 2.355e+20 with value 0 and continue = 1 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) +#> search[ 2.355e+07 ] = 1049.11(96.307) +#> search[ 2.355e+08 ] = 1049.11(96.307) +#> search[ 2.355e+09 ] = 1049.11(96.307) +#> search[ 2.355e+10 ] = 1049.11(96.307) +#> search[ 2.355e+11 ] = 1049.11(96.307) +#> search[ 2.355e+12 ] = 1049.11(96.307) +#> search[ 2.355e+13 ] = 1049.11(96.307) +#> search[ 2.355e+14 ] = 1049.11(96.307) +#> search[ 2.355e+15 ] = 1049.11(96.307) +#> search[ 2.355e+16 ] = 1049.11(96.307) +#> search[ 2.355e+17 ] = 1049.11(96.307) +#> search[ 2.355e+18 ] = 1049.11(96.307) +#> search[ 2.355e+19 ] = 1049.11(96.307) #> -#> Running at Laplace(8.74539e-11) None Grid-point #22 at 2.615e+20 Fold #1 Rep #1 pred log like = 372.477 -#> Running at Laplace(8.74539e-11) None Grid-point #22 at 2.615e+20 Fold #2 Rep #1 pred log like = 427.325 -#> Running at Laplace(8.74539e-11) None Grid-point #22 at 2.615e+20 Fold #3 Rep #1 pred log like = 468.972 -#> Running at Laplace(8.74539e-11) None Grid-point #22 at 2.615e+20 Fold #4 Rep #1 pred log like = 505.448 -#> Running at Laplace(8.74539e-11) None Grid-point #22 at 2.615e+20 Fold #5 Rep #1 pred log like = 364.283 -#> Running at Laplace(8.74539e-11) None Grid-point #22 at 2.615e+20 Fold #6 Rep #1 pred log like = 433.204 -#> Running at Laplace(8.74539e-11) None Grid-point #22 at 2.615e+20 Fold #7 Rep #1 pred log like = 443.18 -#> Running at Laplace(8.74539e-11) None Grid-point #22 at 2.615e+20 Fold #8 Rep #1 pred log like = 438.402 -#> Running at Laplace(8.74539e-11) None Grid-point #22 at 2.615e+20 Fold #9 Rep #1 pred log like = 475.918 -#> Running at Laplace(8.74539e-11) None Grid-point #22 at 2.615e+20 Fold #10 Rep #1 pred log like = 470.318 -#> AvgPred = 439.953 with stdev = 42.2422 -#> Completed at 2.615e+20 -#> Next point at 3.27402e+12 with value 439.953 and continue = 0 -#> search[ 0.2615 ] = 439.952(42.2492) -#> search[ 2.615 ] = 439.952(42.2447) -#> search[ 26.15 ] = 439.953(42.243) -#> search[ 261.5 ] = 439.953(42.2425) -#> search[ 2615 ] = 439.953(42.2423) -#> search[ 26150 ] = 439.953(42.2423) -#> search[ 261500 ] = 439.953(42.2422) -#> search[ 2.615e+06 ] = 439.953(42.2422) -#> search[ 2.615e+07 ] = 439.953(42.2422) -#> search[ 2.615e+08 ] = 439.953(42.2422) -#> search[ 2.615e+09 ] = 439.953(42.2422) -#> search[ 2.615e+10 ] = 439.953(42.2422) -#> search[ 2.615e+11 ] = 439.953(42.2422) -#> search[ 2.615e+12 ] = 439.953(42.2422) -#> search[ 2.615e+13 ] = 439.953(42.2422) -#> search[ 2.615e+14 ] = 439.953(42.2422) -#> search[ 2.615e+15 ] = 439.953(42.2422) -#> search[ 2.615e+16 ] = 439.953(42.2422) -#> search[ 2.615e+17 ] = 439.953(42.2422) -#> search[ 2.615e+18 ] = 439.953(42.2422) -#> search[ 2.615e+19 ] = 439.953(42.2422) -#> search[ 2.615e+20 ] = 439.953(42.2422) +#> Running at Laplace(9.21551e-11) None Grid-point #22 at 2.355e+20 Fold #1 Rep #1 pred log like = 1071.68 +#> Running at Laplace(9.21551e-11) None Grid-point #22 at 2.355e+20 Fold #2 Rep #1 pred log like = 887.707 +#> Running at Laplace(9.21551e-11) None Grid-point #22 at 2.355e+20 Fold #3 Rep #1 pred log like = 989.752 +#> Running at Laplace(9.21551e-11) None Grid-point #22 at 2.355e+20 Fold #4 Rep #1 pred log like = 1248.83 +#> Running at Laplace(9.21551e-11) None Grid-point #22 at 2.355e+20 Fold #5 Rep #1 pred log like = 1083.66 +#> Running at Laplace(9.21551e-11) None Grid-point #22 at 2.355e+20 Fold #6 Rep #1 pred log like = 1084.42 +#> Running at Laplace(9.21551e-11) None Grid-point #22 at 2.355e+20 Fold #7 Rep #1 pred log like = 1009.43 +#> Running at Laplace(9.21551e-11) None Grid-point #22 at 2.355e+20 Fold #8 Rep #1 pred log like = 927.809 +#> Running at Laplace(9.21551e-11) None Grid-point #22 at 2.355e+20 Fold #9 Rep #1 pred log like = 1097.98 +#> Running at Laplace(9.21551e-11) None Grid-point #22 at 2.355e+20 Fold #10 Rep #1 pred log like = 1089.84 +#> AvgPred = 1049.11 with stdev = 96.307 +#> Completed at 2.355e+20 +#> Next point at 5.19595e+12 with value 1049.11 and continue = 0 +#> search[ 0.2355 ] = 1049.11(96.3088) +#> search[ 2.355 ] = 1049.11(96.3073) +#> search[ 23.55 ] = 1049.11(96.3071) +#> search[ 235.5 ] = 1049.11(96.307) +#> search[ 2355 ] = 1049.11(96.307) +#> search[ 23550 ] = 1049.11(96.307) +#> search[ 235500 ] = 1049.11(96.307) +#> search[ 2.355e+06 ] = 1049.11(96.307) +#> search[ 2.355e+07 ] = 1049.11(96.307) +#> search[ 2.355e+08 ] = 1049.11(96.307) +#> search[ 2.355e+09 ] = 1049.11(96.307) +#> search[ 2.355e+10 ] = 1049.11(96.307) +#> search[ 2.355e+11 ] = 1049.11(96.307) +#> search[ 2.355e+12 ] = 1049.11(96.307) +#> search[ 2.355e+13 ] = 1049.11(96.307) +#> search[ 2.355e+14 ] = 1049.11(96.307) +#> search[ 2.355e+15 ] = 1049.11(96.307) +#> search[ 2.355e+16 ] = 1049.11(96.307) +#> search[ 2.355e+17 ] = 1049.11(96.307) +#> search[ 2.355e+18 ] = 1049.11(96.307) +#> search[ 2.355e+19 ] = 1049.11(96.307) +#> search[ 2.355e+20 ] = 1049.11(96.307) #> #> -#> Maximum predicted log likelihood (439.953) estimated at: -#> 3.27402e+12 (variance) -#> 7.81582e-07 (lambda) +#> Maximum predicted log likelihood (1049.11) estimated at: +#> 5.19595e+12 (variance) +#> 6.20415e-07 (lambda) #> #> Fitting model at optimal hyperparameter -#> Using prior: Laplace(7.81582e-07) None +#> Using prior: Laplace(6.20415e-07) None #Find out what the optimal hyperparameter was: getHyperParameter(fit) -#> [1] 3.274021e+12 +#> [1] 5.19595e+12 #Extract the current log-likelihood, and coefficients logLik(fit) -#> 'log Lik.' -2097.62 (df=3) +#> 'log Lik.' -2307.763 (df=3) coef(fit) #> (Intercept) 1 2 -#> -3.87566911 0.05844875 0.01875022 +#> -3.54550102 0.31433174 -0.03279651 #We can only retrieve the confidence interval for unregularized coefficients: confint(fit, c(0)) #> Using 1 thread(s) #> covariate 2.5 % 97.5 % evaluations -#> (Intercept) 0 -3.910302 -3.841399 22 +#> (Intercept) 0 -3.573019 -3.518211 22
diff --git a/docs/reference/logLik.cyclopsFit.html b/docs/reference/logLik.cyclopsFit.html index 5f68c200..40951e17 100644 --- a/docs/reference/logLik.cyclopsFit.html +++ b/docs/reference/logLik.cyclopsFit.html @@ -76,7 +76,7 @@

Examples

#Generate some simulated data:
 sim <- simulateCyclopsData(nstrata = 1, nrows = 1000, ncovars = 2, eCovarsPerRow = 0.5, 
                            model = "poisson")
-#> Sparseness = 77.4 %
+#> Sparseness = 75.25 %
 cyclopsData <- convertToCyclopsData(sim$outcomes, sim$covariates, modelType = "pr", 
                                     addIntercept = TRUE)
 #> Sorting covariates by covariateId and rowId
@@ -89,81 +89,558 @@ 

Examples

#Fit the model fit <- fitCyclopsModel(cyclopsData,prior = prior, control = control) #> Using cross-validation selector type byRow -#> Performing 10-fold cross-validation [seed = 1698757939] with data partitions of sizes 100 100 100 100 100 100 100 100 100 100 +#> Performing 10-fold cross-validation [seed = 1698789252] with data partitions of sizes 100 100 100 100 100 100 100 100 100 100 #> Using 1 thread(s) -#> Starting var = 0.226 (default) -#> Running at Laplace(2.97482) None Grid-point #1 at 0.226 Fold #1 Rep #1 pred log like = 424.312 -#> Running at Laplace(2.97482) None Grid-point #1 at 0.226 Fold #2 Rep #1 pred log like = 286.112 -#> Running at Laplace(2.97482) None Grid-point #1 at 0.226 Fold #3 Rep #1 pred log like = 542.244 -#> Running at Laplace(2.97482) None Grid-point #1 at 0.226 Fold #4 Rep #1 pred log like = 462.595 -#> Running at Laplace(2.97482) None Grid-point #1 at 0.226 Fold #5 Rep #1 pred log like = 523.632 -#> Running at Laplace(2.97482) None Grid-point #1 at 0.226 Fold #6 Rep #1 pred log like = 390.675 -#> Running at Laplace(2.97482) None Grid-point #1 at 0.226 Fold #7 Rep #1 pred log like = 360.237 -#> Running at Laplace(2.97482) None Grid-point #1 at 0.226 Fold #8 Rep #1 pred log like = 399.312 -#> Running at Laplace(2.97482) None Grid-point #1 at 0.226 Fold #9 Rep #1 pred log like = 395.077 -#> Running at Laplace(2.97482) None Grid-point #1 at 0.226 Fold #10 Rep #1 pred log like = 331.197 -#> AvgPred = 411.539 with stdev = 76.2186 -#> Completed at 0.226 -#> Next point at 2.26 with value 0 and continue = 1 -#> search[ 0.226 ] = 411.539(76.2186) -#> -#> Running at Laplace(0.940721) None Grid-point #2 at 2.26 Fold #1 Rep #1 pred log like = 424.271 -#> Running at Laplace(0.940721) None Grid-point #2 at 2.26 Fold #2 Rep #1 pred log like = 286.187 -#> Running at Laplace(0.940721) None Grid-point #2 at 2.26 Fold #3 Rep #1 pred log like = 542.304 -#> Running at Laplace(0.940721) None Grid-point #2 at 2.26 Fold #4 Rep #1 pred log like = 462.57 -#> Running at Laplace(0.940721) None Grid-point #2 at 2.26 Fold #5 Rep #1 pred log like = 523.608 -#> Running at Laplace(0.940721) None Grid-point #2 at 2.26 Fold #6 Rep #1 pred log like = 390.669 -#> Running at Laplace(0.940721) None Grid-point #2 at 2.26 Fold #7 Rep #1 pred log like = 360.212 -#> Running at Laplace(0.940721) None Grid-point #2 at 2.26 Fold #8 Rep #1 pred log like = 399.333 -#> Running at Laplace(0.940721) None Grid-point #2 at 2.26 Fold #9 Rep #1 pred log like = 395.126 -#> Running at Laplace(0.940721) None Grid-point #2 at 2.26 Fold #10 Rep #1 pred log like = 331.12 -#> AvgPred = 411.54 with stdev = 76.2193 -#> Completed at 2.26 -#> Next point at 22.6 with value 0 and continue = 1 -#> search[ 0.226 ] = 411.539(76.2186) -#> search[ 2.26 ] = 411.54(76.2193) -#> -#> Running at Laplace(0.297482) None Grid-point #3 at 22.6 Fold #1 Rep #1 pred log like = 424.258 -#> Running at Laplace(0.297482) None Grid-point #3 at 22.6 Fold #2 Rep #1 pred log like = 286.211 -#> Running at Laplace(0.297482) None Grid-point #3 at 22.6 Fold #3 Rep #1 pred log like = 542.322 -#> Running at Laplace(0.297482) None Grid-point #3 at 22.6 Fold #4 Rep #1 pred log like = 462.562 -#> Running at Laplace(0.297482) None Grid-point #3 at 22.6 Fold #5 Rep #1 pred log like = 523.601 -#> Running at Laplace(0.297482) None Grid-point #3 at 22.6 Fold #6 Rep #1 pred log like = 390.667 -#> Running at Laplace(0.297482) None Grid-point #3 at 22.6 Fold #7 Rep #1 pred log like = 360.204 -#> Running at Laplace(0.297482) None Grid-point #3 at 22.6 Fold #8 Rep #1 pred log like = 399.34 -#> Running at Laplace(0.297482) None Grid-point #3 at 22.6 Fold #9 Rep #1 pred log like = 395.142 -#> Running at Laplace(0.297482) None Grid-point #3 at 22.6 Fold #10 Rep #1 pred log like = 331.095 -#> AvgPred = 411.54 with stdev = 76.2195 -#> Completed at 22.6 -#> Next point at 7.08693 with value 411.54 and continue = 0 -#> search[ 0.226 ] = 411.539(76.2186) -#> search[ 2.26 ] = 411.54(76.2193) -#> search[ 22.6 ] = 411.54(76.2195) -#> -#> -#> Maximum predicted log likelihood (411.54) estimated at: -#> 7.08693 (variance) -#> 0.531234 (lambda) +#> Starting var = 0.2475 (default) +#> Running at Laplace(2.84268) None Grid-point #1 at 0.2475 Fold #1 Rep #1 pred log like = 764.157 +#> Running at Laplace(2.84268) None Grid-point #1 at 0.2475 Fold #2 Rep #1 pred log like = 802.169 +#> Running at Laplace(2.84268) None Grid-point #1 at 0.2475 Fold #3 Rep #1 pred log like = 809.884 +#> Running at Laplace(2.84268) None Grid-point #1 at 0.2475 Fold #4 Rep #1 pred log like = 829.664 +#> Running at Laplace(2.84268) None Grid-point #1 at 0.2475 Fold #5 Rep #1 pred log like = 803.191 +#> Running at Laplace(2.84268) None Grid-point #1 at 0.2475 Fold #6 Rep #1 pred log like = 774.997 +#> Running at Laplace(2.84268) None Grid-point #1 at 0.2475 Fold #7 Rep #1 pred log like = 771.955 +#> Running at Laplace(2.84268) None Grid-point #1 at 0.2475 Fold #8 Rep #1 pred log like = 809.568 +#> Running at Laplace(2.84268) None Grid-point #1 at 0.2475 Fold #9 Rep #1 pred log like = 730.503 +#> Running at Laplace(2.84268) None Grid-point #1 at 0.2475 Fold #10 Rep #1 pred log like = 661.936 +#> AvgPred = 775.802 with stdev = 46.7085 +#> Completed at 0.2475 +#> Next point at 2.475 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> +#> Running at Laplace(0.898933) None Grid-point #2 at 2.475 Fold #1 Rep #1 pred log like = 764.135 +#> Running at Laplace(0.898933) None Grid-point #2 at 2.475 Fold #2 Rep #1 pred log like = 802.181 +#> Running at Laplace(0.898933) None Grid-point #2 at 2.475 Fold #3 Rep #1 pred log like = 809.903 +#> Running at Laplace(0.898933) None Grid-point #2 at 2.475 Fold #4 Rep #1 pred log like = 829.66 +#> Running at Laplace(0.898933) None Grid-point #2 at 2.475 Fold #5 Rep #1 pred log like = 803.233 +#> Running at Laplace(0.898933) None Grid-point #2 at 2.475 Fold #6 Rep #1 pred log like = 774.984 +#> Running at Laplace(0.898933) None Grid-point #2 at 2.475 Fold #7 Rep #1 pred log like = 771.951 +#> Running at Laplace(0.898933) None Grid-point #2 at 2.475 Fold #8 Rep #1 pred log like = 809.56 +#> Running at Laplace(0.898933) None Grid-point #2 at 2.475 Fold #9 Rep #1 pred log like = 730.492 +#> Running at Laplace(0.898933) None Grid-point #2 at 2.475 Fold #10 Rep #1 pred log like = 661.932 +#> AvgPred = 775.803 with stdev = 46.7144 +#> Completed at 2.475 +#> Next point at 24.75 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> +#> Running at Laplace(0.284268) None Grid-point #3 at 24.75 Fold #1 Rep #1 pred log like = 764.128 +#> Running at Laplace(0.284268) None Grid-point #3 at 24.75 Fold #2 Rep #1 pred log like = 802.185 +#> Running at Laplace(0.284268) None Grid-point #3 at 24.75 Fold #3 Rep #1 pred log like = 809.909 +#> Running at Laplace(0.284268) None Grid-point #3 at 24.75 Fold #4 Rep #1 pred log like = 829.658 +#> Running at Laplace(0.284268) None Grid-point #3 at 24.75 Fold #5 Rep #1 pred log like = 803.246 +#> Running at Laplace(0.284268) None Grid-point #3 at 24.75 Fold #6 Rep #1 pred log like = 774.98 +#> Running at Laplace(0.284268) None Grid-point #3 at 24.75 Fold #7 Rep #1 pred log like = 771.949 +#> Running at Laplace(0.284268) None Grid-point #3 at 24.75 Fold #8 Rep #1 pred log like = 809.558 +#> Running at Laplace(0.284268) None Grid-point #3 at 24.75 Fold #9 Rep #1 pred log like = 730.488 +#> Running at Laplace(0.284268) None Grid-point #3 at 24.75 Fold #10 Rep #1 pred log like = 661.931 +#> AvgPred = 775.803 with stdev = 46.7163 +#> Completed at 24.75 +#> Next point at 247.5 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> +#> Running at Laplace(0.0898933) None Grid-point #4 at 247.5 Fold #1 Rep #1 pred log like = 764.126 +#> Running at Laplace(0.0898933) None Grid-point #4 at 247.5 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(0.0898933) None Grid-point #4 at 247.5 Fold #3 Rep #1 pred log like = 809.91 +#> Running at Laplace(0.0898933) None Grid-point #4 at 247.5 Fold #4 Rep #1 pred log like = 829.658 +#> Running at Laplace(0.0898933) None Grid-point #4 at 247.5 Fold #5 Rep #1 pred log like = 803.25 +#> Running at Laplace(0.0898933) None Grid-point #4 at 247.5 Fold #6 Rep #1 pred log like = 774.979 +#> Running at Laplace(0.0898933) None Grid-point #4 at 247.5 Fold #7 Rep #1 pred log like = 771.949 +#> Running at Laplace(0.0898933) None Grid-point #4 at 247.5 Fold #8 Rep #1 pred log like = 809.557 +#> Running at Laplace(0.0898933) None Grid-point #4 at 247.5 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(0.0898933) None Grid-point #4 at 247.5 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7169 +#> Completed at 247.5 +#> Next point at 2475 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> +#> Running at Laplace(0.0284268) None Grid-point #5 at 2475 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(0.0284268) None Grid-point #5 at 2475 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(0.0284268) None Grid-point #5 at 2475 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(0.0284268) None Grid-point #5 at 2475 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(0.0284268) None Grid-point #5 at 2475 Fold #5 Rep #1 pred log like = 803.251 +#> Running at Laplace(0.0284268) None Grid-point #5 at 2475 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(0.0284268) None Grid-point #5 at 2475 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(0.0284268) None Grid-point #5 at 2475 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(0.0284268) None Grid-point #5 at 2475 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(0.0284268) None Grid-point #5 at 2475 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7171 +#> Completed at 2475 +#> Next point at 24750 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> +#> Running at Laplace(0.00898933) None Grid-point #6 at 24750 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(0.00898933) None Grid-point #6 at 24750 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(0.00898933) None Grid-point #6 at 24750 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(0.00898933) None Grid-point #6 at 24750 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(0.00898933) None Grid-point #6 at 24750 Fold #5 Rep #1 pred log like = 803.251 +#> Running at Laplace(0.00898933) None Grid-point #6 at 24750 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(0.00898933) None Grid-point #6 at 24750 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(0.00898933) None Grid-point #6 at 24750 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(0.00898933) None Grid-point #6 at 24750 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(0.00898933) None Grid-point #6 at 24750 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7171 +#> Completed at 24750 +#> Next point at 247500 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> +#> Running at Laplace(0.00284268) None Grid-point #7 at 247500 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(0.00284268) None Grid-point #7 at 247500 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(0.00284268) None Grid-point #7 at 247500 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(0.00284268) None Grid-point #7 at 247500 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(0.00284268) None Grid-point #7 at 247500 Fold #5 Rep #1 pred log like = 803.251 +#> Running at Laplace(0.00284268) None Grid-point #7 at 247500 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(0.00284268) None Grid-point #7 at 247500 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(0.00284268) None Grid-point #7 at 247500 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(0.00284268) None Grid-point #7 at 247500 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(0.00284268) None Grid-point #7 at 247500 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7171 +#> Completed at 247500 +#> Next point at 2.475e+06 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> +#> Running at Laplace(0.000898933) None Grid-point #8 at 2.475e+06 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(0.000898933) None Grid-point #8 at 2.475e+06 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(0.000898933) None Grid-point #8 at 2.475e+06 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(0.000898933) None Grid-point #8 at 2.475e+06 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(0.000898933) None Grid-point #8 at 2.475e+06 Fold #5 Rep #1 pred log like = 803.252 +#> Running at Laplace(0.000898933) None Grid-point #8 at 2.475e+06 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(0.000898933) None Grid-point #8 at 2.475e+06 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(0.000898933) None Grid-point #8 at 2.475e+06 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(0.000898933) None Grid-point #8 at 2.475e+06 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(0.000898933) None Grid-point #8 at 2.475e+06 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7172 +#> Completed at 2.475e+06 +#> Next point at 2.475e+07 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> search[ 2.475e+06 ] = 775.803(46.7172) +#> +#> Running at Laplace(0.000284268) None Grid-point #9 at 2.475e+07 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(0.000284268) None Grid-point #9 at 2.475e+07 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(0.000284268) None Grid-point #9 at 2.475e+07 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(0.000284268) None Grid-point #9 at 2.475e+07 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(0.000284268) None Grid-point #9 at 2.475e+07 Fold #5 Rep #1 pred log like = 803.252 +#> Running at Laplace(0.000284268) None Grid-point #9 at 2.475e+07 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(0.000284268) None Grid-point #9 at 2.475e+07 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(0.000284268) None Grid-point #9 at 2.475e+07 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(0.000284268) None Grid-point #9 at 2.475e+07 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(0.000284268) None Grid-point #9 at 2.475e+07 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7172 +#> Completed at 2.475e+07 +#> Next point at 2.475e+08 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> search[ 2.475e+06 ] = 775.803(46.7172) +#> search[ 2.475e+07 ] = 775.803(46.7172) +#> +#> Running at Laplace(8.98933e-05) None Grid-point #10 at 2.475e+08 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(8.98933e-05) None Grid-point #10 at 2.475e+08 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(8.98933e-05) None Grid-point #10 at 2.475e+08 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(8.98933e-05) None Grid-point #10 at 2.475e+08 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(8.98933e-05) None Grid-point #10 at 2.475e+08 Fold #5 Rep #1 pred log like = 803.252 +#> Running at Laplace(8.98933e-05) None Grid-point #10 at 2.475e+08 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(8.98933e-05) None Grid-point #10 at 2.475e+08 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(8.98933e-05) None Grid-point #10 at 2.475e+08 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(8.98933e-05) None Grid-point #10 at 2.475e+08 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(8.98933e-05) None Grid-point #10 at 2.475e+08 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7172 +#> Completed at 2.475e+08 +#> Next point at 2.475e+09 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> search[ 2.475e+06 ] = 775.803(46.7172) +#> search[ 2.475e+07 ] = 775.803(46.7172) +#> search[ 2.475e+08 ] = 775.803(46.7172) +#> +#> Running at Laplace(2.84268e-05) None Grid-point #11 at 2.475e+09 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(2.84268e-05) None Grid-point #11 at 2.475e+09 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(2.84268e-05) None Grid-point #11 at 2.475e+09 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(2.84268e-05) None Grid-point #11 at 2.475e+09 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(2.84268e-05) None Grid-point #11 at 2.475e+09 Fold #5 Rep #1 pred log like = 803.252 +#> Running at Laplace(2.84268e-05) None Grid-point #11 at 2.475e+09 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(2.84268e-05) None Grid-point #11 at 2.475e+09 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(2.84268e-05) None Grid-point #11 at 2.475e+09 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(2.84268e-05) None Grid-point #11 at 2.475e+09 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(2.84268e-05) None Grid-point #11 at 2.475e+09 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7172 +#> Completed at 2.475e+09 +#> Next point at 2.475e+10 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> search[ 2.475e+06 ] = 775.803(46.7172) +#> search[ 2.475e+07 ] = 775.803(46.7172) +#> search[ 2.475e+08 ] = 775.803(46.7172) +#> search[ 2.475e+09 ] = 775.803(46.7172) +#> +#> Running at Laplace(8.98933e-06) None Grid-point #12 at 2.475e+10 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(8.98933e-06) None Grid-point #12 at 2.475e+10 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(8.98933e-06) None Grid-point #12 at 2.475e+10 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(8.98933e-06) None Grid-point #12 at 2.475e+10 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(8.98933e-06) None Grid-point #12 at 2.475e+10 Fold #5 Rep #1 pred log like = 803.252 +#> Running at Laplace(8.98933e-06) None Grid-point #12 at 2.475e+10 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(8.98933e-06) None Grid-point #12 at 2.475e+10 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(8.98933e-06) None Grid-point #12 at 2.475e+10 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(8.98933e-06) None Grid-point #12 at 2.475e+10 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(8.98933e-06) None Grid-point #12 at 2.475e+10 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7172 +#> Completed at 2.475e+10 +#> Next point at 2.475e+11 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> search[ 2.475e+06 ] = 775.803(46.7172) +#> search[ 2.475e+07 ] = 775.803(46.7172) +#> search[ 2.475e+08 ] = 775.803(46.7172) +#> search[ 2.475e+09 ] = 775.803(46.7172) +#> search[ 2.475e+10 ] = 775.803(46.7172) +#> +#> Running at Laplace(2.84268e-06) None Grid-point #13 at 2.475e+11 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(2.84268e-06) None Grid-point #13 at 2.475e+11 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(2.84268e-06) None Grid-point #13 at 2.475e+11 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(2.84268e-06) None Grid-point #13 at 2.475e+11 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(2.84268e-06) None Grid-point #13 at 2.475e+11 Fold #5 Rep #1 pred log like = 803.252 +#> Running at Laplace(2.84268e-06) None Grid-point #13 at 2.475e+11 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(2.84268e-06) None Grid-point #13 at 2.475e+11 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(2.84268e-06) None Grid-point #13 at 2.475e+11 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(2.84268e-06) None Grid-point #13 at 2.475e+11 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(2.84268e-06) None Grid-point #13 at 2.475e+11 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7172 +#> Completed at 2.475e+11 +#> Next point at 2.475e+12 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> search[ 2.475e+06 ] = 775.803(46.7172) +#> search[ 2.475e+07 ] = 775.803(46.7172) +#> search[ 2.475e+08 ] = 775.803(46.7172) +#> search[ 2.475e+09 ] = 775.803(46.7172) +#> search[ 2.475e+10 ] = 775.803(46.7172) +#> search[ 2.475e+11 ] = 775.803(46.7172) +#> +#> Running at Laplace(8.98933e-07) None Grid-point #14 at 2.475e+12 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(8.98933e-07) None Grid-point #14 at 2.475e+12 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(8.98933e-07) None Grid-point #14 at 2.475e+12 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(8.98933e-07) None Grid-point #14 at 2.475e+12 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(8.98933e-07) None Grid-point #14 at 2.475e+12 Fold #5 Rep #1 pred log like = 803.252 +#> Running at Laplace(8.98933e-07) None Grid-point #14 at 2.475e+12 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(8.98933e-07) None Grid-point #14 at 2.475e+12 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(8.98933e-07) None Grid-point #14 at 2.475e+12 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(8.98933e-07) None Grid-point #14 at 2.475e+12 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(8.98933e-07) None Grid-point #14 at 2.475e+12 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7172 +#> Completed at 2.475e+12 +#> Next point at 2.475e+13 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> search[ 2.475e+06 ] = 775.803(46.7172) +#> search[ 2.475e+07 ] = 775.803(46.7172) +#> search[ 2.475e+08 ] = 775.803(46.7172) +#> search[ 2.475e+09 ] = 775.803(46.7172) +#> search[ 2.475e+10 ] = 775.803(46.7172) +#> search[ 2.475e+11 ] = 775.803(46.7172) +#> search[ 2.475e+12 ] = 775.803(46.7172) +#> +#> Running at Laplace(2.84268e-07) None Grid-point #15 at 2.475e+13 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(2.84268e-07) None Grid-point #15 at 2.475e+13 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(2.84268e-07) None Grid-point #15 at 2.475e+13 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(2.84268e-07) None Grid-point #15 at 2.475e+13 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(2.84268e-07) None Grid-point #15 at 2.475e+13 Fold #5 Rep #1 pred log like = 803.252 +#> Running at Laplace(2.84268e-07) None Grid-point #15 at 2.475e+13 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(2.84268e-07) None Grid-point #15 at 2.475e+13 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(2.84268e-07) None Grid-point #15 at 2.475e+13 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(2.84268e-07) None Grid-point #15 at 2.475e+13 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(2.84268e-07) None Grid-point #15 at 2.475e+13 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7172 +#> Completed at 2.475e+13 +#> Next point at 2.475e+14 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> search[ 2.475e+06 ] = 775.803(46.7172) +#> search[ 2.475e+07 ] = 775.803(46.7172) +#> search[ 2.475e+08 ] = 775.803(46.7172) +#> search[ 2.475e+09 ] = 775.803(46.7172) +#> search[ 2.475e+10 ] = 775.803(46.7172) +#> search[ 2.475e+11 ] = 775.803(46.7172) +#> search[ 2.475e+12 ] = 775.803(46.7172) +#> search[ 2.475e+13 ] = 775.803(46.7172) +#> +#> Running at Laplace(8.98933e-08) None Grid-point #16 at 2.475e+14 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(8.98933e-08) None Grid-point #16 at 2.475e+14 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(8.98933e-08) None Grid-point #16 at 2.475e+14 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(8.98933e-08) None Grid-point #16 at 2.475e+14 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(8.98933e-08) None Grid-point #16 at 2.475e+14 Fold #5 Rep #1 pred log like = 803.252 +#> Running at Laplace(8.98933e-08) None Grid-point #16 at 2.475e+14 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(8.98933e-08) None Grid-point #16 at 2.475e+14 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(8.98933e-08) None Grid-point #16 at 2.475e+14 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(8.98933e-08) None Grid-point #16 at 2.475e+14 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(8.98933e-08) None Grid-point #16 at 2.475e+14 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7172 +#> Completed at 2.475e+14 +#> Next point at 2.475e+15 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> search[ 2.475e+06 ] = 775.803(46.7172) +#> search[ 2.475e+07 ] = 775.803(46.7172) +#> search[ 2.475e+08 ] = 775.803(46.7172) +#> search[ 2.475e+09 ] = 775.803(46.7172) +#> search[ 2.475e+10 ] = 775.803(46.7172) +#> search[ 2.475e+11 ] = 775.803(46.7172) +#> search[ 2.475e+12 ] = 775.803(46.7172) +#> search[ 2.475e+13 ] = 775.803(46.7172) +#> search[ 2.475e+14 ] = 775.803(46.7172) +#> +#> Running at Laplace(2.84268e-08) None Grid-point #17 at 2.475e+15 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(2.84268e-08) None Grid-point #17 at 2.475e+15 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(2.84268e-08) None Grid-point #17 at 2.475e+15 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(2.84268e-08) None Grid-point #17 at 2.475e+15 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(2.84268e-08) None Grid-point #17 at 2.475e+15 Fold #5 Rep #1 pred log like = 803.252 +#> Running at Laplace(2.84268e-08) None Grid-point #17 at 2.475e+15 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(2.84268e-08) None Grid-point #17 at 2.475e+15 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(2.84268e-08) None Grid-point #17 at 2.475e+15 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(2.84268e-08) None Grid-point #17 at 2.475e+15 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(2.84268e-08) None Grid-point #17 at 2.475e+15 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7172 +#> Completed at 2.475e+15 +#> Next point at 2.475e+16 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> search[ 2.475e+06 ] = 775.803(46.7172) +#> search[ 2.475e+07 ] = 775.803(46.7172) +#> search[ 2.475e+08 ] = 775.803(46.7172) +#> search[ 2.475e+09 ] = 775.803(46.7172) +#> search[ 2.475e+10 ] = 775.803(46.7172) +#> search[ 2.475e+11 ] = 775.803(46.7172) +#> search[ 2.475e+12 ] = 775.803(46.7172) +#> search[ 2.475e+13 ] = 775.803(46.7172) +#> search[ 2.475e+14 ] = 775.803(46.7172) +#> search[ 2.475e+15 ] = 775.803(46.7172) +#> +#> Running at Laplace(8.98933e-09) None Grid-point #18 at 2.475e+16 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(8.98933e-09) None Grid-point #18 at 2.475e+16 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(8.98933e-09) None Grid-point #18 at 2.475e+16 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(8.98933e-09) None Grid-point #18 at 2.475e+16 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(8.98933e-09) None Grid-point #18 at 2.475e+16 Fold #5 Rep #1 pred log like = 803.252 +#> Running at Laplace(8.98933e-09) None Grid-point #18 at 2.475e+16 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(8.98933e-09) None Grid-point #18 at 2.475e+16 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(8.98933e-09) None Grid-point #18 at 2.475e+16 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(8.98933e-09) None Grid-point #18 at 2.475e+16 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(8.98933e-09) None Grid-point #18 at 2.475e+16 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7172 +#> Completed at 2.475e+16 +#> Next point at 2.475e+17 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> search[ 2.475e+06 ] = 775.803(46.7172) +#> search[ 2.475e+07 ] = 775.803(46.7172) +#> search[ 2.475e+08 ] = 775.803(46.7172) +#> search[ 2.475e+09 ] = 775.803(46.7172) +#> search[ 2.475e+10 ] = 775.803(46.7172) +#> search[ 2.475e+11 ] = 775.803(46.7172) +#> search[ 2.475e+12 ] = 775.803(46.7172) +#> search[ 2.475e+13 ] = 775.803(46.7172) +#> search[ 2.475e+14 ] = 775.803(46.7172) +#> search[ 2.475e+15 ] = 775.803(46.7172) +#> search[ 2.475e+16 ] = 775.803(46.7172) +#> +#> Running at Laplace(2.84268e-09) None Grid-point #19 at 2.475e+17 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(2.84268e-09) None Grid-point #19 at 2.475e+17 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(2.84268e-09) None Grid-point #19 at 2.475e+17 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(2.84268e-09) None Grid-point #19 at 2.475e+17 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(2.84268e-09) None Grid-point #19 at 2.475e+17 Fold #5 Rep #1 pred log like = 803.252 +#> Running at Laplace(2.84268e-09) None Grid-point #19 at 2.475e+17 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(2.84268e-09) None Grid-point #19 at 2.475e+17 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(2.84268e-09) None Grid-point #19 at 2.475e+17 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(2.84268e-09) None Grid-point #19 at 2.475e+17 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(2.84268e-09) None Grid-point #19 at 2.475e+17 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7172 +#> Completed at 2.475e+17 +#> Next point at 2.475e+18 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> search[ 2.475e+06 ] = 775.803(46.7172) +#> search[ 2.475e+07 ] = 775.803(46.7172) +#> search[ 2.475e+08 ] = 775.803(46.7172) +#> search[ 2.475e+09 ] = 775.803(46.7172) +#> search[ 2.475e+10 ] = 775.803(46.7172) +#> search[ 2.475e+11 ] = 775.803(46.7172) +#> search[ 2.475e+12 ] = 775.803(46.7172) +#> search[ 2.475e+13 ] = 775.803(46.7172) +#> search[ 2.475e+14 ] = 775.803(46.7172) +#> search[ 2.475e+15 ] = 775.803(46.7172) +#> search[ 2.475e+16 ] = 775.803(46.7172) +#> search[ 2.475e+17 ] = 775.803(46.7172) +#> +#> Running at Laplace(8.98933e-10) None Grid-point #20 at 2.475e+18 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(8.98933e-10) None Grid-point #20 at 2.475e+18 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(8.98933e-10) None Grid-point #20 at 2.475e+18 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(8.98933e-10) None Grid-point #20 at 2.475e+18 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(8.98933e-10) None Grid-point #20 at 2.475e+18 Fold #5 Rep #1 pred log like = 803.252 +#> Running at Laplace(8.98933e-10) None Grid-point #20 at 2.475e+18 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(8.98933e-10) None Grid-point #20 at 2.475e+18 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(8.98933e-10) None Grid-point #20 at 2.475e+18 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(8.98933e-10) None Grid-point #20 at 2.475e+18 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(8.98933e-10) None Grid-point #20 at 2.475e+18 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7172 +#> Completed at 2.475e+18 +#> Next point at 2.475e+19 with value 0 and continue = 1 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> search[ 2.475e+06 ] = 775.803(46.7172) +#> search[ 2.475e+07 ] = 775.803(46.7172) +#> search[ 2.475e+08 ] = 775.803(46.7172) +#> search[ 2.475e+09 ] = 775.803(46.7172) +#> search[ 2.475e+10 ] = 775.803(46.7172) +#> search[ 2.475e+11 ] = 775.803(46.7172) +#> search[ 2.475e+12 ] = 775.803(46.7172) +#> search[ 2.475e+13 ] = 775.803(46.7172) +#> search[ 2.475e+14 ] = 775.803(46.7172) +#> search[ 2.475e+15 ] = 775.803(46.7172) +#> search[ 2.475e+16 ] = 775.803(46.7172) +#> search[ 2.475e+17 ] = 775.803(46.7172) +#> search[ 2.475e+18 ] = 775.803(46.7172) +#> +#> Running at Laplace(2.84268e-10) None Grid-point #21 at 2.475e+19 Fold #1 Rep #1 pred log like = 764.125 +#> Running at Laplace(2.84268e-10) None Grid-point #21 at 2.475e+19 Fold #2 Rep #1 pred log like = 802.186 +#> Running at Laplace(2.84268e-10) None Grid-point #21 at 2.475e+19 Fold #3 Rep #1 pred log like = 809.911 +#> Running at Laplace(2.84268e-10) None Grid-point #21 at 2.475e+19 Fold #4 Rep #1 pred log like = 829.657 +#> Running at Laplace(2.84268e-10) None Grid-point #21 at 2.475e+19 Fold #5 Rep #1 pred log like = 803.252 +#> Running at Laplace(2.84268e-10) None Grid-point #21 at 2.475e+19 Fold #6 Rep #1 pred log like = 774.978 +#> Running at Laplace(2.84268e-10) None Grid-point #21 at 2.475e+19 Fold #7 Rep #1 pred log like = 771.948 +#> Running at Laplace(2.84268e-10) None Grid-point #21 at 2.475e+19 Fold #8 Rep #1 pred log like = 809.556 +#> Running at Laplace(2.84268e-10) None Grid-point #21 at 2.475e+19 Fold #9 Rep #1 pred log like = 730.487 +#> Running at Laplace(2.84268e-10) None Grid-point #21 at 2.475e+19 Fold #10 Rep #1 pred log like = 661.93 +#> AvgPred = 775.803 with stdev = 46.7172 +#> Completed at 2.475e+19 +#> Next point at 6.1351e+11 with value 775.803 and continue = 0 +#> search[ 0.2475 ] = 775.802(46.7085) +#> search[ 2.475 ] = 775.803(46.7144) +#> search[ 24.75 ] = 775.803(46.7163) +#> search[ 247.5 ] = 775.803(46.7169) +#> search[ 2475 ] = 775.803(46.7171) +#> search[ 24750 ] = 775.803(46.7171) +#> search[ 247500 ] = 775.803(46.7171) +#> search[ 2.475e+06 ] = 775.803(46.7172) +#> search[ 2.475e+07 ] = 775.803(46.7172) +#> search[ 2.475e+08 ] = 775.803(46.7172) +#> search[ 2.475e+09 ] = 775.803(46.7172) +#> search[ 2.475e+10 ] = 775.803(46.7172) +#> search[ 2.475e+11 ] = 775.803(46.7172) +#> search[ 2.475e+12 ] = 775.803(46.7172) +#> search[ 2.475e+13 ] = 775.803(46.7172) +#> search[ 2.475e+14 ] = 775.803(46.7172) +#> search[ 2.475e+15 ] = 775.803(46.7172) +#> search[ 2.475e+16 ] = 775.803(46.7172) +#> search[ 2.475e+17 ] = 775.803(46.7172) +#> search[ 2.475e+18 ] = 775.803(46.7172) +#> search[ 2.475e+19 ] = 775.803(46.7172) +#> +#> +#> Maximum predicted log likelihood (775.803) estimated at: +#> 6.1351e+11 (variance) +#> 1.80553e-06 (lambda) #> #> Fitting model at optimal hyperparameter -#> Using prior: Laplace(0.531234) None +#> Using prior: Laplace(1.80553e-06) None #Find out what the optimal hyperparameter was: getHyperParameter(fit) -#> [1] 7.086931 +#> [1] 6.1351e+11 #Extract the current log-likelihood, and coefficients logLik(fit) -#> 'log Lik.' -2045.115 (df=3) +#> 'log Lik.' -2193.651 (df=3) coef(fit) #> (Intercept) 1 2 -#> -3.89896635 -0.03932575 0.03150517 +#> -3.61883104 0.06239337 0.04106083 #We can only retrieve the confidence interval for unregularized coefficients: confint(fit, c(0)) #> Using 1 thread(s) #> covariate 2.5 % 97.5 % evaluations -#> (Intercept) 0 -3.932993 -3.865291 22 +#> (Intercept) 0 -3.649159 -3.588779 22
diff --git a/docs/reference/simulateCyclopsData.html b/docs/reference/simulateCyclopsData.html index 222a5a05..59a8f165 100644 --- a/docs/reference/simulateCyclopsData.html +++ b/docs/reference/simulateCyclopsData.html @@ -109,7 +109,7 @@

Examples

#Generate some simulated data:
 sim <- simulateCyclopsData(nstrata = 1, nrows = 1000, ncovars = 2, eCovarsPerRow = 0.5, 
                            model = "poisson")
-#> Sparseness = 76.25 %
+#> Sparseness = 77.45 %
 cyclopsData <- convertToCyclopsData(sim$outcomes, sim$covariates, modelType = "pr", 
                                     addIntercept = TRUE)
 #> Sorting covariates by covariateId and rowId
@@ -122,163 +122,99 @@ 

Examples

#Fit the model fit <- fitCyclopsModel(cyclopsData,prior = prior, control = control) #> Using cross-validation selector type byRow -#> Performing 10-fold cross-validation [seed = 1698757941] with data partitions of sizes 100 100 100 100 100 100 100 100 100 100 +#> Performing 10-fold cross-validation [seed = 1698789255] with data partitions of sizes 100 100 100 100 100 100 100 100 100 100 #> Using 1 thread(s) -#> Starting var = 0.2375 (default) -#> Running at Laplace(2.90191) None Grid-point #1 at 0.2375 Fold #1 Rep #1 pred log like = 102.616 -#> Running at Laplace(2.90191) None Grid-point #1 at 0.2375 Fold #2 Rep #1 pred log like = 194.806 -#> Running at Laplace(2.90191) None Grid-point #1 at 0.2375 Fold #3 Rep #1 pred log like = 198.183 -#> Running at Laplace(2.90191) None Grid-point #1 at 0.2375 Fold #4 Rep #1 pred log like = 145.178 -#> Running at Laplace(2.90191) None Grid-point #1 at 0.2375 Fold #5 Rep #1 pred log like = 75.747 -#> Running at Laplace(2.90191) None Grid-point #1 at 0.2375 Fold #6 Rep #1 pred log like = 78.3006 -#> Running at Laplace(2.90191) None Grid-point #1 at 0.2375 Fold #7 Rep #1 pred log like = 123.887 -#> Running at Laplace(2.90191) None Grid-point #1 at 0.2375 Fold #8 Rep #1 pred log like = 192.631 -#> Running at Laplace(2.90191) None Grid-point #1 at 0.2375 Fold #9 Rep #1 pred log like = 153.328 -#> Running at Laplace(2.90191) None Grid-point #1 at 0.2375 Fold #10 Rep #1 pred log like = 101.303 -#> AvgPred = 136.598 with stdev = 45.0972 -#> Completed at 0.2375 -#> Next point at 2.375 with value 0 and continue = 1 -#> search[ 0.2375 ] = 136.598(45.0972) -#> -#> Running at Laplace(0.917663) None Grid-point #2 at 2.375 Fold #1 Rep #1 pred log like = 102.586 -#> Running at Laplace(0.917663) None Grid-point #2 at 2.375 Fold #2 Rep #1 pred log like = 194.788 -#> Running at Laplace(0.917663) None Grid-point #2 at 2.375 Fold #3 Rep #1 pred log like = 198.074 -#> Running at Laplace(0.917663) None Grid-point #2 at 2.375 Fold #4 Rep #1 pred log like = 145.144 -#> Running at Laplace(0.917663) None Grid-point #2 at 2.375 Fold #5 Rep #1 pred log like = 75.6951 -#> Running at Laplace(0.917663) None Grid-point #2 at 2.375 Fold #6 Rep #1 pred log like = 78.2926 -#> Running at Laplace(0.917663) None Grid-point #2 at 2.375 Fold #7 Rep #1 pred log like = 123.843 -#> Running at Laplace(0.917663) None Grid-point #2 at 2.375 Fold #8 Rep #1 pred log like = 192.573 -#> Running at Laplace(0.917663) None Grid-point #2 at 2.375 Fold #9 Rep #1 pred log like = 153.292 -#> Running at Laplace(0.917663) None Grid-point #2 at 2.375 Fold #10 Rep #1 pred log like = 101.237 -#> AvgPred = 136.553 with stdev = 45.0876 -#> Completed at 2.375 -#> Next point at 0.02375 with value 0 and continue = 1 -#> search[ 0.2375 ] = 136.598(45.0972) -#> search[ 2.375 ] = 136.553(45.0876) -#> -#> Running at Laplace(9.17663) None Grid-point #3 at 0.02375 Fold #1 Rep #1 pred log like = 102.69 -#> Running at Laplace(9.17663) None Grid-point #3 at 0.02375 Fold #2 Rep #1 pred log like = 194.857 -#> Running at Laplace(9.17663) None Grid-point #3 at 0.02375 Fold #3 Rep #1 pred log like = 198.387 -#> Running at Laplace(9.17663) None Grid-point #3 at 0.02375 Fold #4 Rep #1 pred log like = 145.273 -#> Running at Laplace(9.17663) None Grid-point #3 at 0.02375 Fold #5 Rep #1 pred log like = 75.8784 -#> Running at Laplace(9.17663) None Grid-point #3 at 0.02375 Fold #6 Rep #1 pred log like = 78.3257 -#> Running at Laplace(9.17663) None Grid-point #3 at 0.02375 Fold #7 Rep #1 pred log like = 124.02 -#> Running at Laplace(9.17663) None Grid-point #3 at 0.02375 Fold #8 Rep #1 pred log like = 192.801 -#> Running at Laplace(9.17663) None Grid-point #3 at 0.02375 Fold #9 Rep #1 pred log like = 153.42 -#> Running at Laplace(9.17663) None Grid-point #3 at 0.02375 Fold #10 Rep #1 pred log like = 101.43 -#> AvgPred = 136.708 with stdev = 45.1178 -#> Completed at 0.02375 -#> Next point at 0.002375 with value 0 and continue = 1 -#> search[ 0.02375 ] = 136.708(45.1178) -#> search[ 0.2375 ] = 136.598(45.0972) -#> search[ 2.375 ] = 136.553(45.0876) -#> -#> Running at Laplace(29.0191) None Grid-point #4 at 0.002375 Fold #1 Rep #1 pred log like = 102.69 -#> Running at Laplace(29.0191) None Grid-point #4 at 0.002375 Fold #2 Rep #1 pred log like = 194.874 -#> Running at Laplace(29.0191) None Grid-point #4 at 0.002375 Fold #3 Rep #1 pred log like = 198.387 -#> Running at Laplace(29.0191) None Grid-point #4 at 0.002375 Fold #4 Rep #1 pred log like = 145.273 -#> Running at Laplace(29.0191) None Grid-point #4 at 0.002375 Fold #5 Rep #1 pred log like = 75.988 -#> Running at Laplace(29.0191) None Grid-point #4 at 0.002375 Fold #6 Rep #1 pred log like = 78.3279 -#> Running at Laplace(29.0191) None Grid-point #4 at 0.002375 Fold #7 Rep #1 pred log like = 124.209 -#> Running at Laplace(29.0191) None Grid-point #4 at 0.002375 Fold #8 Rep #1 pred log like = 192.831 -#> Running at Laplace(29.0191) None Grid-point #4 at 0.002375 Fold #9 Rep #1 pred log like = 153.42 -#> Running at Laplace(29.0191) None Grid-point #4 at 0.002375 Fold #10 Rep #1 pred log like = 101.43 -#> AvgPred = 136.743 with stdev = 45.1033 -#> Completed at 0.002375 -#> Next point at 0.0002375 with value 0 and continue = 1 -#> search[ 0.002375 ] = 136.743(45.1033) -#> search[ 0.02375 ] = 136.708(45.1178) -#> search[ 0.2375 ] = 136.598(45.0972) -#> search[ 2.375 ] = 136.553(45.0876) -#> -#> Running at Laplace(91.7663) None Grid-point #5 at 0.0002375 Fold #1 Rep #1 pred log like = 102.69 -#> Running at Laplace(91.7663) None Grid-point #5 at 0.0002375 Fold #2 Rep #1 pred log like = 194.874 -#> Running at Laplace(91.7663) None Grid-point #5 at 0.0002375 Fold #3 Rep #1 pred log like = 198.387 -#> Running at Laplace(91.7663) None Grid-point #5 at 0.0002375 Fold #4 Rep #1 pred log like = 145.273 -#> Running at Laplace(91.7663) None Grid-point #5 at 0.0002375 Fold #5 Rep #1 pred log like = 75.988 -#> Running at Laplace(91.7663) None Grid-point #5 at 0.0002375 Fold #6 Rep #1 pred log like = 78.3279 -#> Running at Laplace(91.7663) None Grid-point #5 at 0.0002375 Fold #7 Rep #1 pred log like = 124.209 -#> Running at Laplace(91.7663) None Grid-point #5 at 0.0002375 Fold #8 Rep #1 pred log like = 192.831 -#> Running at Laplace(91.7663) None Grid-point #5 at 0.0002375 Fold #9 Rep #1 pred log like = 153.42 -#> Running at Laplace(91.7663) None Grid-point #5 at 0.0002375 Fold #10 Rep #1 pred log like = 101.43 -#> AvgPred = 136.743 with stdev = 45.1033 -#> Completed at 0.0002375 -#> Next point at 0.00014571 with value 136.751 and continue = 0 -#> search[ 0.0002375 ] = 136.743(45.1033) -#> search[ 0.002375 ] = 136.743(45.1033) -#> search[ 0.02375 ] = 136.708(45.1178) -#> search[ 0.2375 ] = 136.598(45.0972) -#> search[ 2.375 ] = 136.553(45.0876) -#> -#> -#> Maximum predicted log likelihood (136.751) estimated at: -#> 0.00014571 (variance) -#> 117.158 (lambda) +#> Starting var = 0.2255 (default) +#> Running at Laplace(2.97812) None Grid-point #1 at 0.2255 Fold #1 Rep #1 pred log like = 273.307 +#> Running at Laplace(2.97812) None Grid-point #1 at 0.2255 Fold #2 Rep #1 pred log like = 399.873 +#> Running at Laplace(2.97812) None Grid-point #1 at 0.2255 Fold #3 Rep #1 pred log like = 404.29 +#> Running at Laplace(2.97812) None Grid-point #1 at 0.2255 Fold #4 Rep #1 pred log like = 453.587 +#> Running at Laplace(2.97812) None Grid-point #1 at 0.2255 Fold #5 Rep #1 pred log like = 409.265 +#> Running at Laplace(2.97812) None Grid-point #1 at 0.2255 Fold #6 Rep #1 pred log like = 383.626 +#> Running at Laplace(2.97812) None Grid-point #1 at 0.2255 Fold #7 Rep #1 pred log like = 322.027 +#> Running at Laplace(2.97812) None Grid-point #1 at 0.2255 Fold #8 Rep #1 pred log like = 388.538 +#> Running at Laplace(2.97812) None Grid-point #1 at 0.2255 Fold #9 Rep #1 pred log like = 307.366 +#> Running at Laplace(2.97812) None Grid-point #1 at 0.2255 Fold #10 Rep #1 pred log like = 439.966 +#> AvgPred = 378.185 with stdev = 55.6106 +#> Completed at 0.2255 +#> Next point at 2.255 with value 0 and continue = 1 +#> search[ 0.2255 ] = 378.185(55.6106) +#> +#> Running at Laplace(0.941763) None Grid-point #2 at 2.255 Fold #1 Rep #1 pred log like = 273.215 +#> Running at Laplace(0.941763) None Grid-point #2 at 2.255 Fold #2 Rep #1 pred log like = 399.868 +#> Running at Laplace(0.941763) None Grid-point #2 at 2.255 Fold #3 Rep #1 pred log like = 404.281 +#> Running at Laplace(0.941763) None Grid-point #2 at 2.255 Fold #4 Rep #1 pred log like = 453.566 +#> Running at Laplace(0.941763) None Grid-point #2 at 2.255 Fold #5 Rep #1 pred log like = 409.239 +#> Running at Laplace(0.941763) None Grid-point #2 at 2.255 Fold #6 Rep #1 pred log like = 383.621 +#> Running at Laplace(0.941763) None Grid-point #2 at 2.255 Fold #7 Rep #1 pred log like = 322.048 +#> Running at Laplace(0.941763) None Grid-point #2 at 2.255 Fold #8 Rep #1 pred log like = 388.517 +#> Running at Laplace(0.941763) None Grid-point #2 at 2.255 Fold #9 Rep #1 pred log like = 307.357 +#> Running at Laplace(0.941763) None Grid-point #2 at 2.255 Fold #10 Rep #1 pred log like = 439.957 +#> AvgPred = 378.167 with stdev = 55.6206 +#> Completed at 2.255 +#> Next point at 0.02255 with value 0 and continue = 1 +#> search[ 0.2255 ] = 378.185(55.6106) +#> search[ 2.255 ] = 378.167(55.6206) +#> +#> Running at Laplace(9.41763) None Grid-point #3 at 0.02255 Fold #1 Rep #1 pred log like = 273.567 +#> Running at Laplace(9.41763) None Grid-point #3 at 0.02255 Fold #2 Rep #1 pred log like = 399.871 +#> Running at Laplace(9.41763) None Grid-point #3 at 0.02255 Fold #3 Rep #1 pred log like = 404.295 +#> Running at Laplace(9.41763) None Grid-point #3 at 0.02255 Fold #4 Rep #1 pred log like = 453.644 +#> Running at Laplace(9.41763) None Grid-point #3 at 0.02255 Fold #5 Rep #1 pred log like = 409.323 +#> Running at Laplace(9.41763) None Grid-point #3 at 0.02255 Fold #6 Rep #1 pred log like = 383.623 +#> Running at Laplace(9.41763) None Grid-point #3 at 0.02255 Fold #7 Rep #1 pred log like = 321.955 +#> Running at Laplace(9.41763) None Grid-point #3 at 0.02255 Fold #8 Rep #1 pred log like = 388.579 +#> Running at Laplace(9.41763) None Grid-point #3 at 0.02255 Fold #9 Rep #1 pred log like = 307.378 +#> Running at Laplace(9.41763) None Grid-point #3 at 0.02255 Fold #10 Rep #1 pred log like = 439.958 +#> AvgPred = 378.219 with stdev = 55.5785 +#> Completed at 0.02255 +#> Next point at 0.002255 with value 0 and continue = 1 +#> search[ 0.02255 ] = 378.219(55.5785) +#> search[ 0.2255 ] = 378.185(55.6106) +#> search[ 2.255 ] = 378.167(55.6206) +#> +#> Running at Laplace(29.7812) None Grid-point #4 at 0.002255 Fold #1 Rep #1 pred log like = 274.347 +#> Running at Laplace(29.7812) None Grid-point #4 at 0.002255 Fold #2 Rep #1 pred log like = 399.829 +#> Running at Laplace(29.7812) None Grid-point #4 at 0.002255 Fold #3 Rep #1 pred log like = 404.168 +#> Running at Laplace(29.7812) None Grid-point #4 at 0.002255 Fold #4 Rep #1 pred log like = 453.483 +#> Running at Laplace(29.7812) None Grid-point #4 at 0.002255 Fold #5 Rep #1 pred log like = 409.31 +#> Running at Laplace(29.7812) None Grid-point #4 at 0.002255 Fold #6 Rep #1 pred log like = 383.395 +#> Running at Laplace(29.7812) None Grid-point #4 at 0.002255 Fold #7 Rep #1 pred log like = 321.694 +#> Running at Laplace(29.7812) None Grid-point #4 at 0.002255 Fold #8 Rep #1 pred log like = 388.495 +#> Running at Laplace(29.7812) None Grid-point #4 at 0.002255 Fold #9 Rep #1 pred log like = 307.173 +#> Running at Laplace(29.7812) None Grid-point #4 at 0.002255 Fold #10 Rep #1 pred log like = 439.822 +#> AvgPred = 378.172 with stdev = 55.4357 +#> Completed at 0.002255 +#> Next point at 0.0505023 with value 378.206 and continue = 0 +#> search[ 0.002255 ] = 378.172(55.4357) +#> search[ 0.02255 ] = 378.219(55.5785) +#> search[ 0.2255 ] = 378.185(55.6106) +#> search[ 2.255 ] = 378.167(55.6206) +#> +#> +#> Maximum predicted log likelihood (378.206) estimated at: +#> 0.0505023 (variance) +#> 6.29302 (lambda) #> #> Fitting model at optimal hyperparameter -#> Using prior: Laplace(117.158) None +#> Using prior: Laplace(6.29302) None #Find out what the optimal hyperparameter was: getHyperParameter(fit) -#> [1] 0.0001457099 +#> [1] 0.0505023 #Extract the current log-likelihood, and coefficients logLik(fit) -#> 'log Lik.' -1805.625 (df=3) +#> 'log Lik.' -2012.552 (df=3) coef(fit) #> (Intercept) 1 2 -#> -4.287453 0.000000 0.000000 +#> -3.94394237 0.00000000 0.06899875 #We can only retrieve the confidence interval for unregularized coefficients: confint(fit, c(0)) #> Using 1 thread(s) -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! -#> -#> Warning: BLR gradient is ill-conditioned -#> Enforcing convergence! #> covariate 2.5 % 97.5 % evaluations -#> (Intercept) 0 -4.321798 -4.253487 23 +#> (Intercept) 0 -3.977897 -3.909783 22