From 6e2c6283d68a40ca37476c5f54d0f985a39b20fb Mon Sep 17 00:00:00 2001
From: schuemie <schuemie@ohdsi.org>
Date: Tue, 29 Oct 2024 07:58:18 +0100
Subject: [PATCH] Copying codecov code from PLP, where it still seems to be
 working

---
 .github/workflows/R_CMD_check_Hades.yaml | 11 +++++------
 1 file changed, 5 insertions(+), 6 deletions(-)

diff --git a/.github/workflows/R_CMD_check_Hades.yaml b/.github/workflows/R_CMD_check_Hades.yaml
index 5a6378b..680290e 100644
--- a/.github/workflows/R_CMD_check_Hades.yaml
+++ b/.github/workflows/R_CMD_check_Hades.yaml
@@ -26,7 +26,6 @@ jobs:
 
     env:
       GITHUB_PAT: ${{ secrets.GH_TOKEN }}
-      CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
       R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
       RSPM: ${{ matrix.config.rspm }}
       CDM5_ORACLE_CDM_SCHEMA: ${{ secrets.CDM5_ORACLE_CDM_SCHEMA }}
@@ -93,14 +92,14 @@ jobs:
           path: check/*.tar.gz
 
       - name: Install covr
-        if: runner.os == 'macOS'
+        if: runner.os == 'Linux'
         run: |
-          install.packages("covr")
+          remotes::install_cran("covr")
         shell: Rscript {0}
-
+        
       - name: Test coverage
-        if: runner.os == 'macOS'
-        run: covr::codecov()
+        if: runner.os == 'Linux'
+        run: covr::codecov(token = "${{ secrets.CODECOV_TOKEN }}")
         shell: Rscript {0}
 
   Release: