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fix: add back dna sid to index input path
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rroutsong committed Jul 30, 2024
1 parent 61481f3 commit d760e0b
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion workflow/scripts/common.py
Original file line number Diff line number Diff line change
Expand Up @@ -18,7 +18,7 @@ def get_paired_dna(config, rna_sid):
top_mags_dir = join(config["project"]["workpath"], config['project']['id'], "mags")
# construct necessary linked dna artifacts
derep_reqs = join(top_refine_dir, "dRep", "dereplicated_genomes")
mag_index = join(top_mags_dir, "index")
mag_index = join(top_mags_dir, dna_sid, "index")
return [derep_reqs, mag_index]


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