diff --git a/articles/BasicREDCapROperations.html b/articles/BasicREDCapROperations.html index 31c4e051..c5fe0f33 100644 --- a/articles/BasicREDCapROperations.html +++ b/articles/BasicREDCapROperations.html @@ -86,7 +86,7 @@
vignettes/BasicREDCapROperations.Rmd
BasicREDCapROperations.Rmd
# Return all records and all variables.
ds_all_rows_all_fields <- redcap_read(redcap_uri = uri, token = token)$data
-#> 24 variable metadata records were read from REDCap in 0.3 seconds. The http status code was 200.
+#> 24 variable metadata records were read from REDCap in 0.2 seconds. The http status code was 200.
#> The data dictionary describing 17 fields was read from REDCap in 0.2 seconds. The http status code was 200.
-#> 3 instrument metadata records were read from REDCap in 0.2 seconds. The http status code was 200.
-#> 1 rows were read from REDCap in 0.2 seconds. The http status code was 200.
-#> 2 data access groups were read from REDCap in 0.2 seconds. The http status code was 200.
-#> 5 records and 1 columns were read from REDCap in 0.2 seconds. The http status code was 200.
-#> Starting to read 5 records at 2023-09-05 00:38:52.117658.
+#> 3 instrument metadata records were read from REDCap in 0.1 seconds. The http status code was 200.
+#> 1 rows were read from REDCap in 0.1 seconds. The http status code was 200.
+#> 2 data access groups were read from REDCap in 0.1 seconds. The http status code was 200.
+#> 5 records and 1 columns were read from REDCap in 0.1 seconds. The http status code was 200.
+#> Starting to read 5 records at 2024-01-22 17:11:16.547907.
#> Reading batch 1 of 1, with subjects 1 through 5 (ie, 5 unique subject records).
-#> 5 records and 25 columns were read from REDCap in 0.2 seconds. The http status code was 200.
+#> 5 records and 25 columns were read from REDCap in 0.1 seconds. The http status code was 200.
ds_all_rows_all_fields # Inspect the returned dataset
#> # A tibble: 5 × 25
#> record_id name_first name_last address telephone email dob age sex
@@ -173,15 +173,15 @@ Read a subset of the records= token,
records = desired_records
)$data
-#> 24 variable metadata records were read from REDCap in 0.2 seconds. The http status code was 200.
-#> The data dictionary describing 17 fields was read from REDCap in 0.2 seconds. The http status code was 200.
-#> 3 instrument metadata records were read from REDCap in 0.2 seconds. The http status code was 200.
-#> 1 rows were read from REDCap in 0.2 seconds. The http status code was 200.
-#> 2 data access groups were read from REDCap in 0.2 seconds. The http status code was 200.
-#> 2 records and 1 columns were read from REDCap in 0.2 seconds. The http status code was 200.
-#> Starting to read 2 records at 2023-09-05 00:38:54.446897.
+#> 24 variable metadata records were read from REDCap in 0.1 seconds. The http status code was 200.
+#> The data dictionary describing 17 fields was read from REDCap in 0.1 seconds. The http status code was 200.
+#> 3 instrument metadata records were read from REDCap in 0.1 seconds. The http status code was 200.
+#> 1 rows were read from REDCap in 0.1 seconds. The http status code was 200.
+#> 2 data access groups were read from REDCap in 0.1 seconds. The http status code was 200.
+#> 2 records and 1 columns were read from REDCap in 0.1 seconds. The http status code was 200.
+#> Starting to read 2 records at 2024-01-22 17:11:18.365921.
#> Reading batch 1 of 1, with subjects 1 through 3 (ie, 2 unique subject records).
-#> 2 records and 25 columns were read from REDCap in 0.2 seconds. The http status code was 200.
#> ─ Session info ───────────────────────────────────────────────────────────────
#> setting value
-#> version R version 4.3.1 (2023-06-16)
-#> os macOS Monterey 12.6.7
+#> version R version 4.3.2 (2023-10-31)
+#> os macOS Monterey 12.7.2
#> system x86_64, darwin20
#> ui X11
#> language en
#> collate en_US.UTF-8
#> ctype en_US.UTF-8
#> tz UTC
-#> date 2023-09-05
+#> date 2024-01-22
#> pandoc 2.19.2 @ /usr/local/bin/ (via rmarkdown)
#>
#> ─ Packages ───────────────────────────────────────────────────────────────────
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+#> curl 5.2.0 2023-12-08 [1] CRAN (R 4.3.0)
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+#> htmltools 0.5.7 2023-11-03 [1] CRAN (R 4.3.0)
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-#> jsonlite 1.8.7 2023-06-29 [1] CRAN (R 4.3.0)
+#> jsonlite 1.8.8 2023-12-04 [1] CRAN (R 4.3.0)
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-#> knitr * 1.43 2023-05-25 [1] CRAN (R 4.3.0)
-#> lifecycle 1.0.3 2022-10-07 [1] CRAN (R 4.3.0)
+#> knitr * 1.45 2023-10-30 [1] CRAN (R 4.3.0)
+#> lifecycle 1.0.4 2023-11-07 [1] CRAN (R 4.3.0)
#> magrittr * 2.0.3 2022-03-30 [1] CRAN (R 4.3.0)
#> memoise 2.0.1 2021-11-26 [1] CRAN (R 4.3.0)
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@@ -442,40 +442,39 @@ Session Information#> pkgdown 2.0.7 2022-12-14 [1] CRAN (R 4.3.0)
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-#> rmarkdown 2.24 2023-08-14 [1] CRAN (R 4.3.0)
-#> rprojroot 2.0.3 2022-04-02 [1] CRAN (R 4.3.0)
+#> ragg 1.2.7 2023-12-11 [1] CRAN (R 4.3.0)
+#> readr 2.1.5 2024-01-10 [1] CRAN (R 4.3.0)
+#> REDCapR * 1.1.9005 2024-01-22 [1] local
+#> rlang 1.1.3 2024-01-10 [1] CRAN (R 4.3.0)
+#> rmarkdown 2.25 2023-09-18 [1] CRAN (R 4.3.0)
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+#> sass 0.4.8 2023-12-06 [1] CRAN (R 4.3.0)
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-Report rendered by runner at 2023-09-05, 00:39 +0000 in 16 +
Report rendered by runner at 2024-01-22, 17:11 +0000 in 12 seconds.
vignettes/SecurityDatabase.Rmd
SecurityDatabase.Rmd
vignettes/TroubleshootingApiCalls.Rmd
TroubleshootingApiCalls.Rmd
vignettes/advanced-redcapr-operations.Rmd
advanced-redcapr-operations.Rmd
#> 18 records and 125 columns were read from REDCap in 0.6 seconds. The http status code was 200.
+#> 18 records and 125 columns were read from REDCap in 0.2 seconds. The http status code was 200.
@@ -358,7 +358,7 @@ #> 5 records and 25 columns were read from REDCap in 0.2 seconds. The http status code was 200.
+#> 5 records and 25 columns were read from REDCap in 0.1 seconds. The http status code was 200.
Force the connection to use SSL=3 (which is not preferred, and possibly insecure).
@@ -368,7 +368,7 @@SSL Options= token_simple, config_options = config_options )$data
#> 5 records and 25 columns were read from REDCap in 0.2 seconds. The http status code was 200.
+#> 5 records and 25 columns were read from REDCap in 0.1 seconds. The http status code was 200.
config_options <- list(ssl.verifypeer = FALSE)
ds_no_ssl <- redcap_read_oneshot(
@@ -376,7 +376,7 @@ SSL Options= token_simple,
config_options = config_options
)$data
#> 5 records and 25 columns were read from REDCap in 0.2 seconds. The http status code was 200.
+#> 5 records and 25 columns were read from REDCap in 0.1 seconds. The http status code was 200.
#> ─ Session info ───────────────────────────────────────────────────────────────
#> setting value
-#> version R version 4.3.1 (2023-06-16)
-#> os macOS Monterey 12.6.7
+#> version R version 4.3.2 (2023-10-31)
+#> os macOS Monterey 12.7.2
#> system x86_64, darwin20
#> ui X11
#> language en
#> collate en_US.UTF-8
#> ctype en_US.UTF-8
#> tz UTC
-#> date 2023-09-05
+#> date 2024-01-22
#> pandoc 2.19.2 @ /usr/local/bin/ (via rmarkdown)
#>
#> ─ Packages ───────────────────────────────────────────────────────────────────
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Report rendered by runner at 2024-01-22, 17:11 +0000 in 3 seconds.
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@@ -2172,35 +2172,34 @@ Session Information#> pkgdown 2.0.7 2022-12-14 [1] CRAN (R 4.3.0)
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diff --git a/articles/workflow-read.html b/articles/workflow-read.html
index e62816e6..5b6776fc 100644
--- a/articles/workflow-read.html
+++ b/articles/workflow-read.html
@@ -271,15 +271,15 @@ Part 3 - Read Data: Unstructur
redcap_uri = credential$redcap_uri,
token = credential$token
)$data
-#> 24 variable metadata records were read from REDCap in 0.3 seconds. The http status code was 200.
-#> The data dictionary describing 17 fields was read from REDCap in 0.2 seconds. The http status code was 200.
-#> 3 instrument metadata records were read from REDCap in 0.2 seconds. The http status code was 200.
-#> 1 rows were read from REDCap in 0.2 seconds. The http status code was 200.
+#> 24 variable metadata records were read from REDCap in 0.2 seconds. The http status code was 200.
+#> The data dictionary describing 17 fields was read from REDCap in 0.1 seconds. The http status code was 200.
+#> 3 instrument metadata records were read from REDCap in 0.1 seconds. The http status code was 200.
+#> 1 rows were read from REDCap in 0.1 seconds. The http status code was 200.
#> 2 data access groups were read from REDCap in 0.2 seconds. The http status code was 200.
-#> 5 records and 1 columns were read from REDCap in 0.2 seconds. The http status code was 200.
-#> Starting to read 5 records at 2023-09-05 00:39:55.335883.
+#> 5 records and 1 columns were read from REDCap in 0.1 seconds. The http status code was 200.
+#> Starting to read 5 records at 2024-01-22 17:12:06.381678.
#> Reading batch 1 of 1, with subjects 1 through 5 (ie, 5 unique subject records).
-#> 5 records and 25 columns were read from REDCap in 0.2 seconds. The http status code was 200.
+#> 5 records and 25 columns were read from REDCap in 0.1 seconds. The http status code was 200.
At this point, the data.frame ds_1
has everything you
need to start analyzing the project.
@@ -624,15 +624,15 @@Session Information
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Session Information
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Citation
Beasley W (2023). +
Beasley W (2024). REDCapR: Interaction Between R and REDCap. -https://ouhscbbmc.github.io/REDCapR/, https://github.com/OuhscBbmc/REDCapR, https://www.ouhsc.edu/bbmc/, https://project-redcap.org. +R package version 1.1.9005, https://github.com/OuhscBbmc/REDCapR, https://www.ouhsc.edu/bbmc/, https://project-redcap.org, https://ouhscbbmc.github.io/REDCapR/.
@Manual{, title = {REDCapR: Interaction Between R and REDCap}, author = {Will Beasley}, - year = {2023}, - note = {https://ouhscbbmc.github.io/REDCapR/, https://github.com/OuhscBbmc/REDCapR, https://www.ouhsc.edu/bbmc/, https://project-redcap.org}, + year = {2024}, + note = {R package version 1.1.9005, https://github.com/OuhscBbmc/REDCapR, https://www.ouhsc.edu/bbmc/, https://project-redcap.org}, + url = {https://ouhscbbmc.github.io/REDCapR/}, }diff --git a/pkgdown.yml b/pkgdown.yml index 478fb60d..c317c40e 100644 --- a/pkgdown.yml +++ b/pkgdown.yml @@ -9,7 +9,7 @@ articles: longitudinal-and-repeating: longitudinal-and-repeating.html workflow-read: workflow-read.html workflow-write: workflow-write.html -last_built: 2023-09-05T00:37Z +last_built: 2024-01-22T17:10Z urls: reference: https://ouhscbbmc.github.io/REDCapR/reference article: https://ouhscbbmc.github.io/REDCapR/articles diff --git a/reference/kernel_api.html b/reference/kernel_api.html index 0f5c553d..46bb12b4 100644 --- a/reference/kernel_api.html +++ b/reference/kernel_api.html @@ -146,7 +146,7 @@
uri <- "https://bbmc.ouhsc.edu/redcap/api/"
token <- "9A81268476645C4E5F03428B8AC3AA7B"
REDCapR::redcap_version(redcap_uri = uri, token = token)
-#> The REDCap version was successfully determined in 0.2 seconds. The http status code was 200. Is is 13.9.1.
-#> [1] ‘13.9.1’
+#> The REDCap version was successfully determined in 0.1 seconds. The http status code was 200. Is is 13.10.3.
+#> [1] ‘13.10.3’