build_and_test.yml

name: Build and test
on:
  push:
    paths:
      - '**.yml'
      - '**.toml'
      - '**.ini'
      - '**.py'
      - '**.json'
      - '**.csv'
      - '**.pkl'
      - '**.pbz2'
  pull_request:
    paths:
      - '**.yml'
      - '**.toml'
      - '**.ini'
      - '**.py'
      - '**.json'
      - '**.csv'
      - '**.pkl'
      - '**.pbz2'
jobs:
  check-version:
    name: Check version
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4
        with:
          fetch-depth: 0
          repository: ${{ github.event.pull_request.head.repo.full_name }}
          ref: ${{ github.event.pull_request.head.ref }}
      - name: Set up Python
        uses: actions/setup-python@v5
        with:
          python-version: '3.11'
      - name: Build changelog
        run: pip install yaml-changelog>=0.1.7 && make changelog
      - name: Preview changelog update
        run: ".github/get-changelog-diff.sh"
      - name: Check version number has been properly updated
        run: .github/is-version-number-acceptable.sh
  build:
    runs-on: ${{ matrix.os }}
    strategy:
      matrix:
        os: [ubuntu-latest, macos-latest, windows-latest]
        python-version: ["3.11", "3.12"]

    steps:
      - name: Checkout
        uses: actions/checkout@v4
        with:
          persist-credentials: false
      - name: Setup Miniconda using Python ${{ matrix.python-version }}
        uses: conda-incubator/setup-miniconda@v3
        with:
          miniconda-version: "latest"
          auto-update-conda: true
          activate-environment: ogcore-dev
          environment-file: environment.yml
          python-version: ${{ matrix.python-version }}
          auto-activate-base: false
      - name: Build
        shell: bash -l {0}
        run: |
          pip install -e .
      - name: Test
        shell: bash -l {0}
        working-directory: ./
        run: |
          python -m pytest -m "not local" --cov=./ --cov-report=xml
      - name: Upload coverage to Codecov
        if: matrix.os == 'ubuntu-latest' && contains(github.repository, 'PSLmodels/OG-Core')
        uses: codecov/codecov-action@v4
        with:
          files: ./coverage.xml
          flags: unittests
          name: codecov-umbrella
          token: ${{ secrets.CODECOV_TOKEN }}
          fail_ci_if_error: true
          verbose: true