references.bib

% Encoding: UTF-8

@article{fortmann-grote2016,
  title = {{{SIMEX}}: {{Simulation}} of {{Experiments}} at {{Advanced Light Sources}}},
  shorttitle = {{{SIMEX}}},
  author = {{Fortmann-Grote}, C. and Andreev, A. A. and Briggs, R. and Bussmann, M. and Buzmakov, A. and Garten, M. and Grund, A. and H{\"u}bl, A. and Hauff, S. and Joy, A. and Jurek, Z. and Loh, N. D. and R{\"u}ter, T. and Samoylova, L. and Santra, R. and Schneidmiller, E. A. and Sharma, A. and Wing, M. and Yakubov, S. and Yoon, C. H. and Yurkov, M. V. and Ziaja, B. and Mancuso, A. P.},
  year = {2016},
  month = nov,
  journal = {arXiv:1610.05980 [physics]},
  eprint = {1610.05980},
  eprinttype = {arxiv},
  primaryclass = {physics},
  archiveprefix = {arXiv},
  langid = {english},
  keywords = {Physics - Computational Physics,Physics - Instrumentation and Detectors}
}




@article{white2012jac,
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}



@misc{pysingfel,
  title = {Chuckie82/Pysingfel},
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@misc{xwiz,
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@article{samoylova2016,
  title = {{{WavePropaGator}}: Interactive Framework for {{X-ray}} Free-Electron Laser Optics Design and Simulations},
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  copyright = {http://creativecommons.org/licenses/by/2.0/uk},
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}




@article{e2021,
  title = {Effects of Radiation Damage and Inelastic Scattering on Single-Particle Imaging of Hydrated Proteins with an {{X-ray Free-Electron Laser}}},
  author = {E, Juncheng and Stransky, Michal and Jurek, Zoltan and {Fortmann-Grote}, Carsten and Juha, Libor and Santra, Robin and Ziaja, Beata and Mancuso, Adrian P.},
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  copyright = {2021 The Author(s)},
  langid = {english},
  annotation = {Bandiera\_abtest: a Cc\_license\_type: cc\_by Cg\_type: Nature Research Journals Primary\_atype: Research Subject\_term: Atomic and molecular interactions with photons;Single-molecule biophysics;X-rays Subject\_term\_id: atomic-and-molecular-interactions-with-photons;single-molecule-biophysics;x-rays}
}

@inproceedings{manfredda2020,
author = {M. Manfredda and A. Hafner and S. Gerusina and N. Mahne and A. Simoncig and M. Zangrando and L. Raimondi},
title = {{WISER wavefront propagation simulation code: advances and applications}},
volume = {11493},
booktitle = {Advances in Computational Methods for X-Ray Optics V},
editor = {Oleg Chubar and Kawal Sawhney},
organization = {International Society for Optics and Photonics},
publisher = {SPIE},
pages = {114930B},
keywords = {optics, metrology, OASYS, kirchoff, simulation, huygens-fresnel, beamline simulation, x-ray},
year = {2020},
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}

@article{e2022,
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@article{fortmann-grote2017iucrj,
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  copyright = {http://creativecommons.org/licenses/by/2.0/uk},
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}

@article{yoon2016srep,
  title = {A Comprehensive Simulation Framework for Imaging Single Particles and Biomolecules at the {{European X}}-Ray {{Free}}-{{Electron Laser}}},
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@misc{simex,
  title = {{{PaNOSC}}-{{ViNYL}}/{{SimEx}}},
  year = {2020},
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  url = {https://github.com/PaNOSC-ViNYL/SimEx},
  urldate = {2020-07-19},
  copyright = {View license         ,                 View license},
  howpublished = {https://github.com/PaNOSC-ViNYL/SimEx}
}


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@Article{Rebuffi2016,
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@Misc{Fortmann-Grote:zenodo2019,
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  date   = {2019-11-01},
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@Misc{Bertelsen:zenodo2019,
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@Misc{Juncheng:zenodo2019,
  author = {E, J. C.},
  title  = {Example dataset for openPMD-conform molecular dynamics data (MD domain extension)},
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@Misc{Hafner:zenodo2019,
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@article{ostlin2019,
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@article{jurek2016,
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@Comment{jabref-meta: databaseType:biblatex;}

@article{SanchezdelRio2022,
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@article{Yu2022,
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