From a461c54424369ccbd501b887ea1722e6480582eb Mon Sep 17 00:00:00 2001 From: Matt Cieslak Date: Sun, 15 Dec 2024 23:51:19 -0500 Subject: [PATCH] lint+outputs --- qsirecon/tests/data/scalar_mapper_outputs.txt | 6 +++--- qsirecon/tests/data/ss3t_fod_autotrack_outputs.txt | 8 ++++---- qsirecon/workflows/recon/build_workflow.py | 2 +- 3 files changed, 8 insertions(+), 8 deletions(-) diff --git a/qsirecon/tests/data/scalar_mapper_outputs.txt b/qsirecon/tests/data/scalar_mapper_outputs.txt index 1fb3659f..5fe01219 100644 --- a/qsirecon/tests/data/scalar_mapper_outputs.txt +++ b/qsirecon/tests/data/scalar_mapper_outputs.txt @@ -89,11 +89,11 @@ derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-MNI152NL derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-MNI152NLin2009cAsym_model-tensor_param-tyz_dwimap.nii.gz derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-MNI152NLin2009cAsym_model-tensor_param-tzz_dwimap.json derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-MNI152NLin2009cAsym_model-tensor_param-tzz_dwimap.nii.gz -derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-T1w_dwimap.map.gz +derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-T1w_model-gqi_dwimap.fib.gz derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-T1w_model-gqi_bundle-AssociationArcuateFasciculusL_streamlines.tck.gz derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-T1w_model-gqi_bundle-AssociationArcuateFasciculusR_streamlines.tck.gz -derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-T1w_model-gqi_bundles-DSIStudio_scalarstats.tsv -derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-T1w_model-gqi_bundles-DSIStudio_tdistats.tsv +derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-T1w_bundles-DSIStudio_scalarstats.tsv +derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-T1w_bundles-DSIStudio_tdistats.tsv derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-T1w_model-gqi_bundlestats.csv derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-T1w_model-gqi_dwimap.fib.gz.icbm152_adult.map.gz derivatives/qsirecon-DSIStudio/sub-ABCD/dwi/sub-ABCD_acq-10per000_space-T1w_model-gqi_param-gfa_dwimap.json diff --git a/qsirecon/tests/data/ss3t_fod_autotrack_outputs.txt b/qsirecon/tests/data/ss3t_fod_autotrack_outputs.txt index 29f7252e..bffc4049 100644 --- a/qsirecon/tests/data/ss3t_fod_autotrack_outputs.txt +++ b/qsirecon/tests/data/ss3t_fod_autotrack_outputs.txt @@ -10,10 +10,10 @@ derivatives/qsirecon-SS3TAutoTrack/logs/CITATION.tex derivatives/qsirecon-SS3TAutoTrack/sub-PNC derivatives/qsirecon-SS3TAutoTrack/sub-PNC.html derivatives/qsirecon-SS3TAutoTrack/sub-PNC/dwi -derivatives/qsirecon-SS3TAutoTrack/sub-PNC/dwi/sub-PNC_acq-realistic_space-T1w_model-gqi_bundle-AssociationArcuateFasciculusL_streamlines.tck.gz -derivatives/qsirecon-SS3TAutoTrack/sub-PNC/dwi/sub-PNC_acq-realistic_space-T1w_model-gqi_bundle-AssociationArcuateFasciculusR_streamlines.tck.gz -derivatives/qsirecon-SS3TAutoTrack/sub-PNC/dwi/sub-PNC_acq-realistic_space-T1w_model-gqi_bundlestats.csv -derivatives/qsirecon-SS3TAutoTrack/sub-PNC/dwi/sub-PNC_acq-realistic_space-T1w_model-gqi_dwimap.fib.gz.icbm152_adult.map.gz +derivatives/qsirecon-SS3TAutoTrack/sub-PNC/dwi/sub-PNC_acq-realistic_space-T1w_model-ss3t_bundle-AssociationArcuateFasciculusL_streamlines.tck.gz +derivatives/qsirecon-SS3TAutoTrack/sub-PNC/dwi/sub-PNC_acq-realistic_space-T1w_model-ss3t_bundle-AssociationArcuateFasciculusR_streamlines.tck.gz +derivatives/qsirecon-SS3TAutoTrack/sub-PNC/dwi/sub-PNC_acq-realistic_space-T1w_model-ss3t_bundlestats.csv +derivatives/qsirecon-SS3TAutoTrack/sub-PNC/dwi/sub-PNC_acq-realistic_space-T1w_model-ss3t_dwimap.fib.gz.icbm152_adult.map.gz derivatives/qsirecon-SS3TAutoTrack/sub-PNC/dwi/sub-PNC_acq-realistic_space-T1w_model-gqi_dwimap.fib.gz derivatives/qsirecon-SS3TAutoTrack/sub-PNC/dwi/sub-PNC_acq-realistic_space-T1w_model-gqi_param-gfa_dwimap.json derivatives/qsirecon-SS3TAutoTrack/sub-PNC/dwi/sub-PNC_acq-realistic_space-T1w_model-gqi_param-gfa_dwimap.nii.gz diff --git a/qsirecon/workflows/recon/build_workflow.py b/qsirecon/workflows/recon/build_workflow.py index df108ac8..e36d5a62 100644 --- a/qsirecon/workflows/recon/build_workflow.py +++ b/qsirecon/workflows/recon/build_workflow.py @@ -12,8 +12,8 @@ init_dipy_mapmri_recon_wf, ) from .dsi_studio import ( - init_dsi_studio_autotrack_wf, init_dsi_studio_autotrack_registration_wf, + init_dsi_studio_autotrack_wf, init_dsi_studio_connectivity_wf, init_dsi_studio_export_wf, init_dsi_studio_recon_wf,