Add more BIDS App parameters

[tsalo]

Summary

In working on #1040, I noticed that a bunch of command-line arguments in ASLPrep aren't in XCP-D. At least some of them seem like they could be useful in XCP-D.

• --stop-on-first-crash: Whether the workflow should stop or continue after the first error. In config, but not CLI. Implemented in Add --stop-on-first-crash option to command-line interface #1044.
• --boilerplate_only: Only generate a boilerplate.
• --sloppy: Run in sloppy mode (meaning, suboptimal parameters that minimize run-time).
  • I'm not sure how applicable this is to XCP-D.
• --debug: Debug mode(s). In config, but not CLI.
• --fs_subjects_dir?
• --md_only_boilerplate: Do not convert boilerplate from MarkDown to LaTex and HTML. In config, but not CLI.
• --low_mem: Utilize uncompressed NIfTIs and other tricks to minimize memory allocation.
• --write_graph: Write out the computational graph corresponding to the planned preprocessing. In config, but not CLI.

[psychelzh]

Especially requires --stop-on-first-crash, now the pipeline won't stop after many crashes and requires a manual stop for my case.

[tsalo]

I think #1040 addressed this.