diff --git a/sunflower_TD.csv b/sunflower_TD.csv index 321771b..a64c1c8 100644 --- a/sunflower_TD.csv +++ b/sunflower_TD.csv @@ -1,5 +1,5 @@ -Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage,Variable status,Variable Xref,Institution,Scientist,Date,Language,Crop,Trait ID,Trait name,Trait class,Trait description,Trait synonyms,Main trait abbreviation,Alternative trait abbreviations,Entity,Attribute,Trait status,Trait Xref,Method ID,Method name,Method class,Method description,Formula,Method reference,Scale ID,Scale name,Scale class,Decimal places,Lower limit,Upper limit,Scale Xref,Category 1,Category 2,Category 3,Category 4,Category 5,Category 6,Category 7,Category 8,Category 9,Category 10 -,CO_359:0000096,DroHard_E_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000014,Drought susceptibility,Abiotic stress,Plant reaction to drought stress,DROUGHT,DroSus,,Plant,Drought susceptibility,Standard,,CO_359:0000095,trichomes/mm,Estimation,Observe the growth of plants per plot/entry under droughted condition and rate the susceptibility.,,,CO_359:0000086,ISU Susceptibility scale (1-9),Ordinal,,,,,"1 (1=resistant, 9=susceptible)","2 (1=resistant, 9=susceptible)","3 (1=resistant, 9=susceptible)","4 (1=resistant, 9=susceptible)","5 (1=resistant, 9=susceptible)","6 (1=resistant, 9=susceptible)","7 (1=resistant, 9=susceptible)","8 (1=resistant, 9=susceptible)","9 (1=resistant, 9=susceptible)", +Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage,Variable status,Variable Xref,Institution,Scientist,Date,Language,Crop,Trait ID,Trait name,Trait class,Trait description,Trait synonyms,Main trait abbreviation,Alternative trait abbreviations,Entity,Attribute,Trait status,Trait Xref,Method ID,Method name,Method class,Method description,Formula,Method reference,Scale ID,Scale name,Scale class,Decimal places,Lower limit,Upper limit,Scale Xref,Category 1,Category 2,Category 3,Category 4,Category 5,Category 6,Category 7,Category 8,Category 9,Category 10 +,CO_359:0000096,DroHard_E_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000014,Drought susceptibility,Abiotic stress,Plant reaction to drought stress,DROUGHT,DroSus,,Plant,Drought susceptibility,Standard,,CO_359:0000095,Trichomes/mm,Estimation,Observe the growth of plants per plot/entry under droughted condition and rate the susceptibility.,,,CO_359:0000086,ISU Susceptibility scale (1-9),Ordinal,,,,,"1 (1=resistant, 9=susceptible)","2 (1=resistant, 9=susceptible)","3 (1=resistant, 9=susceptible)","4 (1=resistant, 9=susceptible)","5 (1=resistant, 9=susceptible)","6 (1=resistant, 9=susceptible)","7 (1=resistant, 9=susceptible)","8 (1=resistant, 9=susceptible)","9 (1=resistant, 9=susceptible)", ,CO_359:0000100,ColdHard_E_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000097,Plant hardiness,Abiotic stress,Cold hardiness,COLD_HARD,ColdHard,,Plant,Cold hardiness,Standard,,CO_359:0000098,Cold hardiness susceptibility class,Estimation,"Cold hardiness (1=resistant, 9=susceptible)",,,CO_359:0000099,ISU Cold hardiness susceptibility scale,Ordinal,,,,,"1 (1=resistant, 9=susceptible)","2 (1=resistant, 9=susceptible)","3 (1=resistant, 9=susceptible)","4 (1=resistant, 9=susceptible)","5 (1=resistant, 9=susceptible)","6 (1=resistant, 9=susceptible)","7 (1=resistant, 9=susceptible)","8 (1=resistant, 9=susceptible)","9 (1=resistant, 9=susceptible)", ,CO_359:0000102,SaltTol_E_cat,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000041,Salinity tolerance,Abiotic stress,Determination of tolerance to soil salinity,SALT_TOL,SaltSus,,Plant,Salinity susceptibility,Standard,,CO_359:0000058,Salinity tolerance class,Estimation,Observe the growth of plants per plot/entry at the field presenting soil salinity and rate the tolerance.,,,CO_359:0000101,ISU Salinity tolerance scale,Nominal,,,,,susceptible,tolerant,,,,,,,, ,CO_359:0000104,DroSus_E_0to9,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000014,Drought susceptibility,Abiotic stress,Plant reaction to drought stress,DROUGHT,DroSus,,Plant,Drought susceptibility,Standard,,CO_359:0000103,Drought susceptibility class,Estimation,Observe the growth of plants per plot/entry under droughted condition and rate the susceptibility.,,IBPGR-Descriptors,CO_359:0000074,IBPGR Susceptibility scale (0-9),Ordinal,,,,,0= Absent,1= Very low or no visible sign of susceptibility,2= Very low to low susceptibility,3= Low susceptibility,4= Low to intermediate susceptibility,5= Intermediate susceptibility,6= Intermediate to high susceptibility,7= High susceptibility,8= High to very high susceptibility,9= Very high susceptibility @@ -10,46 +10,46 @@ Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage ,CO_359:0000117,SaltSus_E_0to9,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000041,Salinity tolerance,Abiotic stress,Determination of tolerance to soil salinity,SALT_TOL,SaltSus,,Plant,Salinity susceptibility,Standard,,CO_359:0000116,Salinity susceptibility class,Estimation,Observe the growth of plants per plot/entry at the field presenting soil salinity and rate the susceptibility.,,IBPGR-Descriptors,CO_359:0000074,IBPGR Susceptibility scale (0-9),Ordinal,,,,,0= Absent,1= Very low or no visible sign of susceptibility,2= Very low to low susceptibility,3= Low susceptibility,4= Low to intermediate susceptibility,5= Intermediate susceptibility,6= Intermediate to high susceptibility,7= High susceptibility,8= High to very high susceptibility,9= Very high susceptibility ,CO_359:0000120,WtrLogSus_E_0to9,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000118,Waterlogging susceptibility,Abiotic stress,Susceptibility to waterlogging under high soil moisture conditions,High soil moisture susceptibility,WtrLogSus,,Plant,Waterlogging susceptibility,,,CO_359:0000119,Waterlogging susceptibility class,Estimation,Observe the growth of plants per plot/entry under high soil moisture condition and rate the susceptibility.,,IBPGR-Descriptors,CO_359:0000074,IBPGR Susceptibility scale (0-9),Ordinal,,,,,0= Absent,1= Very low or no visible sign of susceptibility,2= Very low to low susceptibility,3= Low susceptibility,4= Low to intermediate susceptibility,5= Intermediate susceptibility,6= Intermediate to high susceptibility,7= High susceptibility,8= High to very high susceptibility,9= Very high susceptibility ,CO_359:0000124,WtrLogTol_E_1to5,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000121,Waterlogging tolerance,Abiotic stress,Plant tolerance to waterlogging,,WtrLogTol,,Plant,Waterlogging tolerance,,,CO_359:0000122,Waterlogging tolerance class,Estimation,Observe the growth of plants per plot/entry after a waterlogging event and rate the tolerance.,,,CO_359:0000123,1-5 Tolerance scale,Ordinal,,,,,1= highly susceptible,2= susceptible,3= intermediate,4= tolerant,5= highly tolerant,,,,, -,CO_359:0000126,AMoistHarv_M_pct,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000002,Achene moisture content,Agronomical,Achene moisture content,,AMoist,,Achene,Moisture content,,,CO_359:0000125,Acheme moisture content at harvest,Measurement,Seed water content at harvest,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, -,CO_359:0000128,ADryClnHarv_M_pct,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000007,Achene weight,Agronomical,Achene weight,thousand achene weight,HdAW,,Head,Achene weight,Standard,,CO_359:0000127,Clean and dry achene weight,Measurement,Percentage of clean and dry kernels at harvest,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, -,CO_359:0000130,PAW_Cp_g,,,R9,,,"B. Moyers, Julian Pietragalla","B. Moyers, Julian Pietragalla",,EN,Sunflower,CO_359:0000007,Achene weight,Agronomical,Achene weight,thousand achene weight,HdAW,,Head,Achene weight,Standard,,CO_359:0000129,Achene weight per plant,Computation,"Harvest all flower heads with mature seeds, and either allow to air-dry (min. 1 week) or oven dry (min. 3 days). when dry, remove seeds from heads and weigh. use formula to calculate achene weight per plant.",,,CO_359:0000067,g,Numerical,,0,1500,,,,,,,,,,, -,CO_359:0000132,HAW_M_g,,Trial evaluation,Seed,Standard,,"ISU, IBP","Laura Marek, Julian Pietragalla",,EN,Sunflower,CO_359:0000007,Achene weight,Agronomical,Achene weight,thousand achene weight,HdAW,,Head,Achene weight,Standard,,CO_359:0000131,Hundred achene weight,Measurement,Weight of 100 achenes measured in grams,,,CO_359:0000067,g,Numerical,,0,1500,,,,,,,,,,, -,CO_359:0000134,TAW_M_g,,,,,,"INRA, IBP","Nicolas Langlade, Julian Pietragalla",,EN,Sunflower,CO_359:0000007,Achene weight,Agronomical,Achene weight,thousand achene weight,HdAW,,Head,Achene weight,Standard,,CO_359:0000133,Thousand achene weight,Measurement,Taw=(achene_dry_weight / achene_nb)*1000 the thousand achene weight is calculated as such: taw = (achene_dry_weight / achene_nb)*1000,,,CO_359:0000067,g,Numerical,,0,1500,,,,,,,,,,, -,CO_359:0000137,CHex_M_pct,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000135,Cyclo-hexane yield,Agronomical,Cyclo-hexane yield,CYCLOHEXANE,ClyHx,,Cyclohexane,Yield,Standard,,CO_359:0000136,Cyclo-hexane yield,Measurement,Percent c-hex yield,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, +,CO_359:0000126,AMoistHarv_M_pct,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000002,Achene moisture content,Agronomic,Achene moisture content,,AMoist,,Achene,Moisture content,,,CO_359:0000125,Acheme moisture content at harvest,Measurement,Seed water content at harvest,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, +,CO_359:0000128,ADryClnHarv_M_pct,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000007,Achene weight,Agronomic,Achene weight,thousand achene weight,HdAW,,Head,Achene weight,Standard,,CO_359:0000127,Clean and dry achene weight,Measurement,Percentage of clean and dry kernels at harvest,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, +,CO_359:0000130,PAW_Cp_g,,,R9,,,"B. Moyers, Julian Pietragalla","B. Moyers, Julian Pietragalla",,EN,Sunflower,CO_359:0000007,Achene weight,Agronomic,Achene weight,thousand achene weight,HdAW,,Head,Achene weight,Standard,,CO_359:0000129,Achene weight per plant,Computation,"Harvest all flower heads with mature seeds, and either allow to air-dry (min. 1 week) or oven dry (min. 3 days). when dry, remove seeds from heads and weigh. use formula to calculate achene weight per plant.",,,CO_359:0000067,g,Numerical,,0,1500,,,,,,,,,,, +,CO_359:0000132,HAW_M_g,,Trial evaluation,Seed,Standard,,"ISU, IBP","Laura Marek, Julian Pietragalla",,EN,Sunflower,CO_359:0000007,Achene weight,Agronomic,Achene weight,thousand achene weight,HdAW,,Head,Achene weight,Standard,,CO_359:0000131,Hundred achene weight,Measurement,Weight of 100 achenes measured in grams,,,CO_359:0000067,g,Numerical,,0,1500,,,,,,,,,,, +,CO_359:0000134,TAW_M_g,,,,,,"INRA, IBP","Nicolas Langlade, Julian Pietragalla",,EN,Sunflower,CO_359:0000007,Achene weight,Agronomic,Achene weight,thousand achene weight,HdAW,,Head,Achene weight,Standard,,CO_359:0000133,Thousand achene weight,Measurement,Taw=(achene_dry_weight / achene_nb)*1000 the thousand achene weight is calculated as such: taw = (achene_dry_weight / achene_nb)*1000,,,CO_359:0000067,g,Numerical,,0,1500,,,,,,,,,,, +,CO_359:0000137,CHex_M_pct,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000135,Cyclo-hexane yield,Agronomic,Cyclo-hexane yield,CYCLOHEXANE,ClyHx,,Cyclohexane,Yield,Standard,,CO_359:0000136,Cyclo-hexane yield,Measurement,Percent c-hex yield,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, ,CO_359:0000139,AYldGross_M_kgha,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000023,Kernel yield,Quality,Kernel yield,,YldNormH2O,,Seed,Yield,,,CO_359:0000138,"Kernel yield (not cleaned, fresh)",Measurement,Gross kernel yield (with water and impurities),,,CO_359:0000087,kg/ha,Numerical,,0,70,,,,,,,,,,, ,CO_359:0000142,YldClnDry_M_qha,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000023,Kernel yield,Quality,Kernel yield,,YldNormH2O,,Seed,Yield,,,CO_359:0000140,"Kernel yield (cleaned, dry)",Measurement,Clean and dry kernel yield (no water and no impurities),,,CO_359:0000141,q/ha,Numerical,,0,70,,,,,,,,,,, -,CO_359:0000146,MSterType_E_cat,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000143,Male sterility type,Agronomical,Male sterility type,MALE_STER_TYPE,MSterType,,Cell,Male sterility ype,Standard,,CO_359:0000144,Male sterility type class,Estimation,Male sterility type,,,CO_359:0000145,ISU Male sterility scale,Ordinal,,,,,Cytoplasmic,Genetic,,,,,,,, -,CO_359:0000149,Methanol_M_pct,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000147,Methanol yield,Agronomical,Methanol yield,METHANOL,Meth,,Seed,Oil methanol yield,Standard,,CO_359:0000148,Methanol yield,Measurement,Percent methanol yield,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, -,CO_359:0000152,KrnlPct_M_pct,,,Seed,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000150,Seed kernels,Agronomical,Determination of proportion of kernels as part of seeds,KERNEL_PERC,KrnlPct,,Seed,Nutmeat,Standard,,CO_359:0000151,Kernel content,Measurement,Kernel percentage of seed. hull to nutmeat percentage.,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, +,CO_359:0000146,MSterType_E_cat,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000143,Male sterility type,Agronomic,Male sterility type,MALE_STER_TYPE,MSterType,,Cell,Male sterility ype,Standard,,CO_359:0000144,Male sterility type class,Estimation,Male sterility type,,,CO_359:0000145,ISU Male sterility scale,Ordinal,,,,,Cytoplasmic,Genetic,,,,,,,, +,CO_359:0000149,Methanol_M_pct,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000147,Methanol yield,Agronomic,Methanol yield,METHANOL,Meth,,Seed,Oil methanol yield,Standard,,CO_359:0000148,Methanol yield,Measurement,Percent methanol yield,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, +,CO_359:0000152,KrnlPct_M_pct,,,Seed,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000150,Seed kernels,Agronomic,Determination of proportion of kernels as part of seeds,KERNEL_PERC,KrnlPct,,Seed,Nutmeat,Standard,,CO_359:0000151,Kernel content,Measurement,Kernel percentage of seed. hull to nutmeat percentage.,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, ,CO_359:0000153,PerOil_M_pct,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000042,Seed oil content,Biochemical,Oil content in seed,total seed oil content,TotSeedOilCont,,Seed,Oil content,Standard,,CO_359:0000057,Oil content (dry),Measurement,"Kernel oil content, percentage of dry weight at harvest.",,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, -,CO_359:0000155,OilDW_M_pct,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000154,Seed oil content dry,Agronomical,Oil content of seeds,,OilDW,,Seed,Seed oil content dry,,,CO_359:0000057,Oil content (dry),Measurement,"Kernel oil content, percentage of dry weight at harvest.",,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, -,CO_359:0000158,OilNorm_M_pct,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000156,Seed oil content dry 2% impurity,Agronomical,Oil content,,OilNorm,,Seed,Seed oil content dry 2% impurity,,,CO_359:0000157,"Commercial oil content (9% water, 2% impurity)",Measurement,Kernel oil content (dry and clean kernels) at harvest in accordance to the commercial norms. norms are: 9% of water content and 2% impurities.,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, -,CO_359:0000161,OilNormH20_M_pct,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000159,Seed oil content dry not cleaned,Agronomical,Oil content,,OilNormH20,,Seed,Seed oil content dry not cleaned,,,CO_359:0000160,"Commercial oil content (9% water, not cleaned)",Measurement,Kernel oil content (kernels were not cleaned) at harvest in accordance to the commercial norms relative to water content(9% of water content),,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, -,CO_359:0000164,AvailSoilH20Rat_E_n,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000162,Soil water,Agronomical,Determination of available soil water,,AvailSoilH20Rat,,Soil,Water,,,CO_359:0000163,Soil water ratio,Estimation,Estimated soil water ratio available for the plant in the substrate.,,,CO_359:0000094,ratio,Numerical,,10,30,,,,,,,,,,, -,CO_359:0000166,AMoist_M_pct,,Trial evaluation,,,,"INRA, IBP","Nicolas Langlade, Julian Pietragalla",,EN,Sunflower,CO_359:0000002,Achene moisture content,Agronomical,Achene moisture content,,AMoist,,Achene,Moisture content,,,CO_359:0000165,Achene moisture content,Measurement,Seed water content at a given date (seed_h2o_meastime),,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, -,CO_359:0000170,AN_Cp_Ach,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000167,Achene number,Agronomical,Number of achene per unit (area),,AN,,Achene,Number,,,CO_359:0000168,Achene number per m2,Computation,Use formula to calculate achene number.,,,CO_359:0000169,achene/m2,Numerical,,,,,,,,,,,,,, -,CO_359:0000174,HdAN_Ct_Ach,,Trial evaluation,,,,"IBP, UBC","Julian Pietragalla, B. Moyers",,EN,Sunflower,CO_359:0000171,Achene per head,Agronomical,Number of achene per head,,HdAN,,Achene,Number,,,CO_359:0000172,Achenes per head,Counting,Count and record achene number per head.,,,CO_359:0000173,achenes/head,Numerical,,,,,,,,,,,,,, -,CO_359:0000177,ASdSett_Cp_pct,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000175,Achene seed setting,Agronomical,Seed setting as proportion of filled achenes over total achenes number,,ASdSett,,Achene,Seed setting,,,CO_359:0000176,Achene seed setting percentage,Computation,Compute the seed setting as proportion of filled achenes over total achenes number.,100 x (Filled achenes)/(Total achenes),IBPGR-Descriptors,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, -,CO_359:0000179,HdAW_Cp_g,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000007,Achene weight,Agronomical,Achene weight,thousand achene weight,HdAW,,Head,Achene weight,Standard,,CO_359:0000178,Achene weight per head,Computation,Use formula to calculate achene weight per head.,,,CO_359:0000067,g,Numerical,,0,1500,,,,,,,,,,, -,CO_359:0000182,AYldDW_Cp_kgha,,Trial evaluation,,,,"INRA, IBP","Nicolas Langlade, Julian Pietragalla",,EN,Sunflower,CO_359:0000180,Achene yield,Agronomical,Achene yield,,AYldDW,,Achene,Yield,,,CO_359:0000181,Achene yield (Dry weight),Computation,Use formula to calculate seed yield in dry weight basis.,,,CO_359:0000087,kg/ha,Numerical,,0,70,,,,,,,,,,, -,CO_359:0000185,AYldAdj_Cp_kgha,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000183,Achene yield adjusted,Agronomical,Achene yield adjusted,,AYldAdj14,,Achene,Yield,,,CO_359:0000184,Achene yield (Adjusted weight),Computation,Use formula to calculate seed yield adjusted to 14% moisture.,,,CO_359:0000087,kg/ha,Numerical,,0,70,,,,,,,,,,, -,CO_359:0000187,AYldFW_M_gPlot,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000008,Achene yield fresh per plot,Agronomical,Achene yield fresh,,AYldFW,,Achene,Yield,,,CO_359:0000186,Achene yield (Plot fresh weight),Measurement,"Record weight of harvested seed. in breeding trials, a sample area (rather than the whole plot) is generally used for estimating yield.",,,CO_359:0000068,g/plot,Numerical,,,,,,,,,,,,,, -,CO_359:0000189,AYldFW_Cp_kgha,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000008,Achene yield fresh per plot,Agronomical,Achene yield fresh,,AYldFW,,Achene,Yield,,,CO_359:0000188,Achene yield (Fresh weight),Computation,Use formula to calculate seed yield in fresh (field) weight basis.,,,CO_359:0000087,kg/ha,Numerical,,0,70,,,,,,,,,,, -,CO_359:0000193,PAN_Ct_Ach,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000190,Achenes per plant,Agronomical,Number of achenes per plant,,PAN,,Achene,Number,,,CO_359:0000191,Achenes per plant,Counting,Count and record achene number per plant.,,,CO_359:0000192,achene/plant,Numerical,,,,,,,,,,,,,, -,CO_359:0000195,BMDW_M_gPlot,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000010,Biomass yield,Agronomical,Amount (weight) of biomass that was harvested per unit area,Biological yield,BMDW,,Plant,Biomass,,,CO_359:0000194,Biomass yield (Plot Dry weight),Measurement,"Record weight of harvested biomass. in breeding trials, a sample area (rather than the whole plot) is generally used for estimating biomass yield.",,,CO_359:0000068,g/plot,Numerical,,,,,,,,,,,,,, -,CO_359:0000197,BMDW_Cp_gPlot,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000010,Biomass yield,Agronomical,Amount (weight) of biomass that was harvested per unit area,Biological yield,BMDW,,Plant,Biomass,,,CO_359:0000196,Biomass yield (Dry weight),Computation,Use formula to calculate biomass yield in dry weigh basis.,,,CO_359:0000087,kg/ha,Numerical,,0,70,,,,,,,,,,, -,CO_359:0000200,HI_Cp_pct,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000198,Harvest index,Agronomical,Ratio of achene yield to total above ground biomass,Biomass partitioning to achene,HI,,Plant,Harvest index,,,CO_359:0000199,Harvest index (%),Computation,Use formula to calculate harvest index.,MISSING,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, -,CO_359:0000203,HdW_M_g,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000201,Head weight,Agronomical,Head weight,,HdW,,Head,Weight,,,CO_359:0000202,Head weight (average),Measurement,Measure head weight of n samples and record the average.,,,CO_359:0000067,g,Numerical,,0,1500,,,,,,,,,,, -,CO_359:0000206,OilYld_Cp_kgha,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000204,Oil yield,Agronomical,Amount (weight or volume) of oil per unit area,,OilYld,,Seed,Oil yield,,,CO_359:0000205,Computed oil yield (achene yield x oil content),Computation,Oil yield is calculated as the product of achene yield and achene oil content.,MISSING,,CO_359:0000087,kg/ha,Numerical,,0,70,,,,,,,,,,, -,CO_359:0000209,PN_Ct_Pltha,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000037,Plant density,Agronomical,Plants per unit area or sample,"Plant establishment, Crop stand, Plant density, Plant population",PN,,Plant,Number,,,CO_359:0000207,Plant number per ha,Computation,Calculate plant number using the formula.,MISSING,,CO_359:0000208,plant/ha,Numerical,,,,,,,,,,,,,, -,CO_359:0000212,PN_Ct_Pltm,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000037,Plant density,Agronomical,Plants per unit area or sample,"Plant establishment, Crop stand, Plant density, Plant population",PN,,Plant,Number,,,CO_359:0000210,Plant number per m,Counting,"Count plants in a sampling unit (plot, quadrat, lineal meter, row, etc).",,,CO_359:0000211,plant/m,Numerical,,,,,,,,,,,,,, -,CO_359:0000215,PN_Ct_PltPlot,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000037,Plant density,Agronomical,Plants per unit area or sample,"Plant establishment, Crop stand, Plant density, Plant population",PN,,Plant,Number,,,CO_359:0000213,Plant number per plot,Counting,"Count plants in a sampling unit (plot, quadrat, lineal meter, row, etc).",,,CO_359:0000214,plant/plot,Numerical,,,,,,,,,,,,,, -,CO_359:0000218,PEVig_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000216,Plant early vigour,Agronomical,Plant early vigour as an assessment of vegetative growth to describe the capacity of a seedling or plan to grow,,PEVig,,Plant,Early vigour,,,CO_359:0000217,Plant vigour per plot class,Estimation,Observe vigour of the plants per plot/entry and rate it.,,,CO_359:0000062,1-5 General scoring scale,Ordinal,,,,,1= very poor (VP),2= poor (P),3= fair (F),4= good (G),5= very good (VG),,,,, +,CO_359:0000155,OilDW_M_pct,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000154,Seed oil content dry,Agronomic,Oil content of seeds,,OilDW,,Seed,Seed oil content dry,,,CO_359:0000057,Oil content (dry),Measurement,"Kernel oil content, percentage of dry weight at harvest.",,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, +,CO_359:0000158,OilNorm_M_pct,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000156,Seed oil content dry 2% impurity,Agronomic,Oil content,,OilNorm,,Seed,Seed oil content dry 2% impurity,,,CO_359:0000157,"Commercial oil content (9% water, 2% impurity)",Measurement,Kernel oil content (dry and clean kernels) at harvest in accordance to the commercial norms. norms are: 9% of water content and 2% impurities.,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, +,CO_359:0000161,OilNormH20_M_pct,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000159,Seed oil content dry not cleaned,Agronomic,Oil content,,OilNormH20,,Seed,Seed oil content dry not cleaned,,,CO_359:0000160,"Commercial oil content (9% water, not cleaned)",Measurement,Kernel oil content (kernels were not cleaned) at harvest in accordance to the commercial norms relative to water content(9% of water content),,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, +,CO_359:0000164,AvailSoilH20Rat_E_n,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000162,Soil water,Agronomic,Determination of available soil water,,AvailSoilH20Rat,,Soil,Water,,,CO_359:0000163,Soil water ratio,Estimation,Estimated soil water ratio available for the plant in the substrate.,,,CO_359:0000094,ratio,Numerical,,10,30,,,,,,,,,,, +,CO_359:0000166,AMoist_M_pct,,Trial evaluation,,,,"INRA, IBP","Nicolas Langlade, Julian Pietragalla",,EN,Sunflower,CO_359:0000002,Achene moisture content,Agronomic,Achene moisture content,,AMoist,,Achene,Moisture content,,,CO_359:0000165,Achene moisture content,Measurement,Seed water content at a given date (seed_h2o_meastime),,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, +,CO_359:0000170,AN_Cp_Ach,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000167,Achene number,Agronomic,Number of achene per unit (area),,AN,,Achene,Number,,,CO_359:0000168,Achene number per m2,Computation,Use formula to calculate achene number.,,,CO_359:0000169,achene/m2,Numerical,,,,,,,,,,,,,, +,CO_359:0000174,HdAN_Ct_Ach,,Trial evaluation,,,,"IBP, UBC","Julian Pietragalla, B. Moyers",,EN,Sunflower,CO_359:0000171,Achene per head,Agronomic,Number of achene per head,,HdAN,,Achene,Number,,,CO_359:0000172,Achenes per head,Counting,Count and record achene number per head.,,,CO_359:0000173,achenes/head,Numerical,,,,,,,,,,,,,, +,CO_359:0000177,ASdSett_Cp_pct,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000175,Achene seed setting,Agronomic,Seed setting as proportion of filled achenes over total achenes number,,ASdSett,,Achene,Seed setting,,,CO_359:0000176,Achene seed setting percentage,Computation,Compute the seed setting as proportion of filled achenes over total achenes number.,100 x (Filled achenes)/(Total achenes),IBPGR-Descriptors,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, +,CO_359:0000179,HdAW_Cp_g,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000007,Achene weight,Agronomic,Achene weight,thousand achene weight,HdAW,,Head,Achene weight,Standard,,CO_359:0000178,Achene weight per head,Computation,Use formula to calculate achene weight per head.,,,CO_359:0000067,g,Numerical,,0,1500,,,,,,,,,,, +,CO_359:0000182,AYldDW_Cp_kgha,,Trial evaluation,,,,"INRA, IBP","Nicolas Langlade, Julian Pietragalla",,EN,Sunflower,CO_359:0000180,Achene yield,Agronomic,Achene yield,,AYldDW,,Achene,Yield,,,CO_359:0000181,Achene yield (Dry weight),Computation,Use formula to calculate seed yield in dry weight basis.,,,CO_359:0000087,kg/ha,Numerical,,0,70,,,,,,,,,,, +,CO_359:0000185,AYldAdj_Cp_kgha,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000183,Achene yield adjusted,Agronomic,Achene yield adjusted,,AYldAdj14,,Achene,Yield,,,CO_359:0000184,Achene yield (Adjusted weight),Computation,Use formula to calculate seed yield adjusted to 14% moisture.,,,CO_359:0000087,kg/ha,Numerical,,0,70,,,,,,,,,,, +,CO_359:0000187,AYldFW_M_gPlot,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000008,Achene yield fresh per plot,Agronomic,Achene yield fresh,,AYldFW,,Achene,Yield,,,CO_359:0000186,Achene yield (Plot fresh weight),Measurement,"Record weight of harvested seed. in breeding trials, a sample area (rather than the whole plot) is generally used for estimating yield.",,,CO_359:0000068,g/plot,Numerical,,,,,,,,,,,,,, +,CO_359:0000189,AYldFW_Cp_kgha,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000008,Achene yield fresh per plot,Agronomic,Achene yield fresh,,AYldFW,,Achene,Yield,,,CO_359:0000188,Achene yield (Fresh weight),Computation,Use formula to calculate seed yield in fresh (field) weight basis.,,,CO_359:0000087,kg/ha,Numerical,,0,70,,,,,,,,,,, +,CO_359:0000193,PAN_Ct_Ach,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000190,Achenes per plant,Agronomic,Number of achenes per plant,,PAN,,Achene,Number,,,CO_359:0000191,Achenes per plant,Counting,Count and record achene number per plant.,,,CO_359:0000192,achene/plant,Numerical,,,,,,,,,,,,,, +,CO_359:0000195,BMDW_M_gPlot,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000010,Biomass yield,Agronomic,Amount (weight) of biomass that was harvested per unit area,Biological yield,BMDW,,Plant,Biomass,,,CO_359:0000194,Biomass yield (Plot Dry weight),Measurement,"Record weight of harvested biomass. in breeding trials, a sample area (rather than the whole plot) is generally used for estimating biomass yield.",,,CO_359:0000068,g/plot,Numerical,,,,,,,,,,,,,, +,CO_359:0000197,BMDW_Cp_gPlot,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000010,Biomass yield,Agronomic,Amount (weight) of biomass that was harvested per unit area,Biological yield,BMDW,,Plant,Biomass,,,CO_359:0000196,Biomass yield (Dry weight),Computation,Use formula to calculate biomass yield in dry weigh basis.,,,CO_359:0000087,kg/ha,Numerical,,0,70,,,,,,,,,,, +,CO_359:0000200,HI_Cp_pct,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000198,Harvest index,Agronomic,Ratio of achene yield to total above ground biomass,Biomass partitioning to achene,HI,,Plant,Harvest index,,,CO_359:0000199,Harvest index (%),Computation,Use formula to calculate harvest index.,MISSING,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, +,CO_359:0000203,HdW_M_g,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000201,Head weight,Agronomic,Head weight,,HdW,,Head,Weight,,,CO_359:0000202,Head weight (average),Measurement,Measure head weight of n samples and record the average.,,,CO_359:0000067,g,Numerical,,0,1500,,,,,,,,,,, +,CO_359:0000206,OilYld_Cp_kgha,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000204,Oil yield,Agronomic,Amount (weight or volume) of oil per unit area,,OilYld,,Seed,Oil yield,,,CO_359:0000205,Computed oil yield (achene yield x oil content),Computation,Oil yield is calculated as the product of achene yield and achene oil content.,MISSING,,CO_359:0000087,kg/ha,Numerical,,0,70,,,,,,,,,,, +,CO_359:0000209,PN_Ct_Pltha,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000037,Plant density,Agronomic,Plants per unit area or sample,"Plant establishment, Crop stand, Plant density, Plant population",PN,,Plant,Number,,,CO_359:0000207,Plant number per ha,Computation,Calculate plant number using the formula.,MISSING,,CO_359:0000208,plant/ha,Numerical,,,,,,,,,,,,,, +,CO_359:0000212,PN_Ct_Pltm,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000037,Plant density,Agronomic,Plants per unit area or sample,"Plant establishment, Crop stand, Plant density, Plant population",PN,,Plant,Number,,,CO_359:0000210,Plant number per m,Counting,"Count plants in a sampling unit (plot, quadrat, lineal meter, row, etc).",,,CO_359:0000211,plant/m,Numerical,,,,,,,,,,,,,, +,CO_359:0000215,PN_Ct_PltPlot,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000037,Plant density,Agronomic,Plants per unit area or sample,"Plant establishment, Crop stand, Plant density, Plant population",PN,,Plant,Number,,,CO_359:0000213,Plant number per plot,Counting,"Count plants in a sampling unit (plot, quadrat, lineal meter, row, etc).",,,CO_359:0000214,plant/plot,Numerical,,,,,,,,,,,,,, +,CO_359:0000218,PEVig_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000216,Plant early vigour,Agronomic,Plant early vigour as an assessment of vegetative growth to describe the capacity of a seedling or plan to grow,,PEVig,,Plant,Early vigour,,,CO_359:0000217,Plant vigour per plot class,Estimation,Observe vigour of the plants per plot/entry and rate it.,,,CO_359:0000062,1-5 General scoring scale,Ordinal,,,,,1= very poor (VP),2= poor (P),3= fair (F),4= good (G),5= very good (VG),,,,, ,CO_359:0000221,PH_E_1to9,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000038,Plant height,Morphological,Plant height,MINIMUM PLANT HEIGHT,MinPltHgt,,Plant,Height,Standard,,CO_359:0000219,Plant height class,Estimation,Estimate plant height and rate it.,,IBPGR-Descriptors,CO_359:0000220,IBPGR Plant height scale (1-9),Ordinal,,,,,"1= Dwarf, less than 40 cm.","2= Extremely small, 40.1 - 80.0 cm.","3 Small, 80.1 - 120.0 cm.","4= Small to medium, 120.1 - 160.0 cm.","5= Medium, 160.1 - 200.0 cm.","6= Medium to tall, 200.1 - 240 cm.","7= Tall, 240.1 - 280.0 cm.","8= Tall to extremely tall, 280.1 - 320.0 cm.","9= Extremely tall, greater than 320.0 cm.", -,CO_359:0000223,LodgInc_E_pct,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000039,Plant lodging,Agronomical,Plant lodging,,LodgInc,,Plant,Lodging incidence,,,CO_359:0000222,Plant lodging incidence,Estimation,Observe plant lodging per plot/entry and rate it.,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, -,CO_359:0000225,LodgSus_E_0to9,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000039,Plant lodging,Agronomical,Plant lodging,,LodgInc,,Plant,Lodging incidence,,,CO_359:0000224,Plant lodging susceptibility class,Estimation,Observe lodging susceptibility and record it.,,,CO_359:0000074,IBPGR Susceptibility scale (0-9),Ordinal,,,,,0= Absent,1= Very low or no visible sign of susceptibility,2= Very low to low susceptibility,3= Low susceptibility,4= Low to intermediate susceptibility,5= Intermediate susceptibility,6= Intermediate to high susceptibility,7= High susceptibility,8= High to very high susceptibility,9= Very high susceptibility -,CO_359:0000228,AgrScr_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000226,Plant phenotypic acceptability,Agronomical,Rating of overall agronomic attributes and health of plants,Agronomical score,AgrScr,,Plant,Phenotypic acceptability,,,CO_359:0000227,Phenotypic acceptability class,Estimation,For phenotypic acceptability (agronomic score) observe visually detectable signs of factors limiting yields and rate it.,,,CO_359:0000062,1-5 General scoring scale,Ordinal,,,,,1= very poor (VP),2= poor (P),3= fair (F),4= good (G),5= very good (VG),,,,, -,CO_359:0000231,StDia_M_cm,,Trial evaluation,,Standard,,"ISU, IBP","Laura Marek, Julian Pietragalla",,EN,Sunflower,CO_359:0000229,Stalk diameter,Agronomical,Stalk diameter,STALK DIAMETER,StalkDiam,,Stem,Diameter,Standard,,CO_359:0000230,Stem diameter 60 cm above ground,Measurement,Stalk diameter in centimeters measured 60 centimeters above the ground.,,,CO_359:0000063,cm,Numerical,,0,,,,,,,,,,,, +,CO_359:0000223,LodgInc_E_pct,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000039,Plant lodging,Agronomic,Plant lodging,,LodgInc,,Plant,Lodging incidence,,,CO_359:0000222,Plant lodging incidence,Estimation,Observe plant lodging per plot/entry and rate it.,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, +,CO_359:0000225,LodgSus_E_0to9,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000039,Plant lodging,Agronomic,Plant lodging,,LodgInc,,Plant,Lodging incidence,,,CO_359:0000224,Plant lodging susceptibility class,Estimation,Observe lodging susceptibility and record it.,,,CO_359:0000074,IBPGR Susceptibility scale (0-9),Ordinal,,,,,0= Absent,1= Very low or no visible sign of susceptibility,2= Very low to low susceptibility,3= Low susceptibility,4= Low to intermediate susceptibility,5= Intermediate susceptibility,6= Intermediate to high susceptibility,7= High susceptibility,8= High to very high susceptibility,9= Very high susceptibility +,CO_359:0000228,AgrScr_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000226,Plant phenotypic acceptability,Agronomic,Rating of overall agronomic attributes and health of plants,Agronomical score,AgrScr,,Plant,Phenotypic acceptability,,,CO_359:0000227,Phenotypic acceptability class,Estimation,For phenotypic acceptability (agronomic score) observe visually detectable signs of factors limiting yields and rate it.,,,CO_359:0000062,1-5 General scoring scale,Ordinal,,,,,1= very poor (VP),2= poor (P),3= fair (F),4= good (G),5= very good (VG),,,,, +,CO_359:0000231,StDia_M_cm,,Trial evaluation,,Standard,,"ISU, IBP","Laura Marek, Julian Pietragalla",,EN,Sunflower,CO_359:0000229,Stalk diameter,Agronomic,Stalk diameter,STALK DIAMETER,StalkDiam,,Stem,Diameter,Standard,,CO_359:0000230,Stem diameter 60 cm above ground,Measurement,Stalk diameter in centimeters measured 60 centimeters above the ground.,,,CO_359:0000063,cm,Numerical,,0,,,,,,,,,,,, ,CO_359:0000234,AlloPres_E_0to1,,,All,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000232,Allomones,Biochemical,Presence of allomones,ALLOMONES,AlloPres,,Leaf,Allomones,Standard,,CO_359:0000233,Allomone presence,Estimation,Test for the presence of allomones in individual plant,,,CO_359:0000093,presence/absence,Nominal,,,,,1=PRESENCE,0=ABSENCE,,,,,,,, ,CO_359:0000237,BC_M_pct,,,R9,,,UBC,"Lexer C, Welch ME, Raymond O, Rieseberg LH",,EN,Sunflower,CO_359:0000235,Boron content,Biochemical,Boron content in the plant,boron content,BC,,Plant,Boron content,,,CO_359:0000236,Plant boron content,Measurement,Total aboveground biomass is analyzed for elemental content using icap spectrometry,,"Lexer C, Welch ME, Raymond O, Rieseberg LH (2003) The origin of ecological divergence in Helianthus paradoxus (Asteraceae): selection on transgressive characters in a novel hybrid habitat. Evolution, in press.",CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, ,CO_359:0000240,CaC_M_pct,,,R9,,,UBC,"Lexer C, Welch ME, Raymond O, Rieseberg LH",,EN,Sunflower,CO_359:0000238,Calcium content,Biochemical,Percent of calcium content in the plant,calcium content,CaC,,Plant,Calcium content,,,CO_359:0000239,Plant Calcium content,Measurement,Total aboveground biomass is analyzed for Calciuml content using icap spectrometry,,"Lexer C, Welch ME, Raymond O, Rieseberg LH (2003) The origin of ecological divergence in Helianthus paradoxus (Asteraceae): selection on transgressive characters in a novel hybrid habitat. Evolution, in press.",CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, @@ -77,8 +77,8 @@ Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage ,CO_359:0000303,Grdlrshop_E_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000301,Grasshopper susceptibility,Biotic stress,"Susceptibility to grasshoppers, all species",GRASSHOPPER,Grshop,,Plant,Grasshopper susceptibility,Standard,,CO_359:0000302,Grasshopper susceptibility class,Estimation,"Susceptibility to grasshopper, all sp. (1=resistant, 9=susceptible)",,,CO_359:0000086,ISU Susceptibility scale (1-9),Ordinal,,,,,"1 (1=resistant, 9=susceptible)","2 (1=resistant, 9=susceptible)","3 (1=resistant, 9=susceptible)","4 (1=resistant, 9=susceptible)","5 (1=resistant, 9=susceptible)","6 (1=resistant, 9=susceptible)","7 (1=resistant, 9=susceptible)","8 (1=resistant, 9=susceptible)","9 (1=resistant, 9=susceptible)", ,CO_359:0000306,ResMordellid_E_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000304,Mordellid susceptibility,Biotic stress,Susceptibility to mordellid,MORDELLID,Mordellid,,Plant,Mordellid susceptibility,Standard,,CO_359:0000305,Mordellid susceptibility class,Estimation,Susceptibility to mordellid,,,CO_359:0000086,ISU Susceptibility scale (1-9),Ordinal,,,,,"1 (1=resistant, 9=susceptible)","2 (1=resistant, 9=susceptible)","3 (1=resistant, 9=susceptible)","4 (1=resistant, 9=susceptible)","5 (1=resistant, 9=susceptible)","6 (1=resistant, 9=susceptible)","7 (1=resistant, 9=susceptible)","8 (1=resistant, 9=susceptible)","9 (1=resistant, 9=susceptible)", ,CO_359:0000309,ResMycopl_E_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000307,Mycoplasma susceptibility,Biotic stress,Susceptibility to mycoplasmas,MYCOPLASMAS,Mycopl,,Plant,Mycoplasmas susceptibility,Standard,,CO_359:0000308,Mycoplasma susceptibility class,Estimation,Susceptibility to mycoplasmas,,,CO_359:0000086,ISU Susceptibility scale (1-9),Ordinal,,,,,"1 (1=resistant, 9=susceptible)","2 (1=resistant, 9=susceptible)","3 (1=resistant, 9=susceptible)","4 (1=resistant, 9=susceptible)","5 (1=resistant, 9=susceptible)","6 (1=resistant, 9=susceptible)","7 (1=resistant, 9=susceptible)","8 (1=resistant, 9=susceptible)","9 (1=resistant, 9=susceptible)", -,CO_359:0000312,OrobAttRate_M_n,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000034,Orobanche shoot number,Biotic stress,Number of boomrape (Orobanche†spp.) shoots,Orobanche attacking rate,OroShoN,,Plant,Orobanche shoot number,Standard,,CO_359:0000310,Orobanche shoot number,Measurement,"Attacking rate, the number of orobanche shoots per total number of plants",,,CO_359:0000311,Orobanche roots/total number of plants,Numerical,,,,,,,,,,,,,, -,CO_359:0000314,OrobFreq_M_pct,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000035,Orobanche susceptibility,Biotic stress,Susceptibility to boomrape (Orobanche†spp) infection,Orobanche frequency,OroSus,,Plant,Orobanche susceptibility,Standard,,CO_359:0000313,Orobanche infection percentage,Measurement,The percentage of plants parasitized by orobanche,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, +,CO_359:0000312,OrobAttRate_M_n,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000034,Orobanche shoot number,Biotic stress,Number of boomrape (Orobanche†spp.) shoots,Orobanche attacking rate,OroShoN,,Plant,Orobanche shoot number,Standard,,CO_359:0000310,Orobanche shoot number,Measurement,"Attacking rate, the number of orobanche shoots per total number of plants",,,CO_359:0000311,Orobanche roots/total number of plants,Numerical,,,,,,,,,,,,,, +,CO_359:0000314,OrobFreq_M_pct,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000035,Orobanche susceptibility,Biotic stress,Susceptibility to boomrape (Orobanche†spp) infection,Orobanche frequency,OroSus,,Plant,Orobanche susceptibility,Standard,,CO_359:0000313,Orobanche infection percentage,Measurement,The percentage of plants parasitized by orobanche,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, ,CO_359:0000317,InsectHerb_E_pct,,,,,,CGP,Loren Rieseberg,,EN,Sunflower,CO_359:0000315,Pest damage,Biotic stress,Plant affected by insect herbivory damage,percent insect herbivory,InsectHerb,,Plant,Herbivore (insect) damage,,,CO_359:0000316,Herbivore (insect) damage percentage,Estimation,Percent of the plant affected by insect herbivory damage,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, ,CO_359:0000320,ResPhialYel_E_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000318,Phialophora yellows susceptibility,Biotic stress,Susceptibility to Phialophora yellows (Phialophora spp.),PHIAL_YELLOWS,PhialYel,,Plant,Phialophora susceptibility,Standard,,CO_359:0000319,Phialophora yellows susceptibility class,Estimation,Susceptibility to phialophora yellows (phialophora spp.),,,CO_359:0000086,ISU Susceptibility scale (1-9),Ordinal,,,,,"1 (1=resistant, 9=susceptible)","2 (1=resistant, 9=susceptible)","3 (1=resistant, 9=susceptible)","4 (1=resistant, 9=susceptible)","5 (1=resistant, 9=susceptible)","6 (1=resistant, 9=susceptible)","7 (1=resistant, 9=susceptible)","8 (1=resistant, 9=susceptible)","9 (1=resistant, 9=susceptible)", ,CO_359:0000323,ResPhomBlgt_E_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000321,Phoma blight susceptibility,Biotic stress,Susceptibility to Phoma blight (Phoma oleracea sacc),PHOMA_BLIGHT,PhomBlgt,,Plant,Phoma blight susceptibility,Standard,,CO_359:0000322,Phoma blight susceptibility class,Estimation,Susceptibility to phoma blight (phoma oleracea sacc),,,CO_359:0000086,ISU Susceptibility scale (1-9),Ordinal,,,,,"1 (1=resistant, 9=susceptible)","2 (1=resistant, 9=susceptible)","3 (1=resistant, 9=susceptible)","4 (1=resistant, 9=susceptible)","5 (1=resistant, 9=susceptible)","6 (1=resistant, 9=susceptible)","7 (1=resistant, 9=susceptible)","8 (1=resistant, 9=susceptible)","9 (1=resistant, 9=susceptible)", @@ -94,8 +94,8 @@ Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage ,CO_359:0000354,ResSunMoth_E_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000352,Sunflower moth susceptibility,Biotic stress,Susceptibility to sunflower moth (Homoeosoma electellum) (hulst.),SUN_MOTH,SunMoth,,Plant,Sunflower moth susceptibility,Standard,,CO_359:0000353,Sunflower moth susceptibility class,Estimation,Susceptibility to sunflower moth (homoeosoma electellum) (hulst.),,,CO_359:0000086,ISU Susceptibility scale (1-9),Ordinal,,,,,"1 (1=resistant, 9=susceptible)","2 (1=resistant, 9=susceptible)","3 (1=resistant, 9=susceptible)","4 (1=resistant, 9=susceptible)","5 (1=resistant, 9=susceptible)","6 (1=resistant, 9=susceptible)","7 (1=resistant, 9=susceptible)","8 (1=resistant, 9=susceptible)","9 (1=resistant, 9=susceptible)", ,CO_359:0000357,ResSunSeedWvl_E_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000355,Sunflower seed weevil (C. adspersus) susceptibility,Biotic stress,Susceptibility to sunflower stem weevil (Cylindrocopturus adspersus) lec,SUN_STEM_WEEVIL,SunSeedWvl,,Plant,Sunflower stem weevil susceptibility,Standard,,CO_359:0000356,Sunflower seed weevil (C. adspersus) susceptibility class,Estimation,Susceptibility to sunflower stem weevil (cylindrocopturus adspersus) lec,,,CO_359:0000086,ISU Susceptibility scale (1-9),Ordinal,,,,,"1 (1=resistant, 9=susceptible)","2 (1=resistant, 9=susceptible)","3 (1=resistant, 9=susceptible)","4 (1=resistant, 9=susceptible)","5 (1=resistant, 9=susceptible)","6 (1=resistant, 9=susceptible)","7 (1=resistant, 9=susceptible)","8 (1=resistant, 9=susceptible)","9 (1=resistant, 9=susceptible)", ,CO_359:0000360,ResSunSeedWvl2_E_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000358,Sunflower seed weevil (S. sordidus) susceptibility,Biotic stress,Susceptibility to sunflower seed weevil (Smicronyx sordidus) lec,SUN_SEED_WEEVIL2,SunSeedWvl2,,Plant,Sunflower seed weevil susceptibility,Standard,,CO_359:0000359,Sunflower seed weevil (S. sordidus) susceptibility class,Estimation,Susceptibility to sunflower seed weevil (smicronyx sordidus) lec,,,CO_359:0000086,ISU Susceptibility scale (1-9),Ordinal,,,,,"1 (1=resistant, 9=susceptible)","2 (1=resistant, 9=susceptible)","3 (1=resistant, 9=susceptible)","4 (1=resistant, 9=susceptible)","5 (1=resistant, 9=susceptible)","6 (1=resistant, 9=susceptible)","7 (1=resistant, 9=susceptible)","8 (1=resistant, 9=susceptible)","9 (1=resistant, 9=susceptible)", -,CO_359:0000362,VertNote_E_1to10,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000046,Verticilium infection severity,Biotic stress,Determination of severity of Verticilium infection,,VertNoteScale1,,Plant,Verticilium Infection,,,CO_359:0000059,Verticilium severity class,Estimation,Estimation of verticillum development severity on a plot,,,CO_359:0000361,INRA Verticilium severity scale (0-10),,,0,10,,,,,,,,,,, -,CO_359:0000364,VertNote_E_1to5,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000046,Verticilium infection severity,Biotic stress,Determination of severity of Verticilium infection,,VertNoteScale1,,Plant,Verticilium Infection,,,CO_359:0000059,Verticilium severity class,Estimation,Estimation of verticillum development severity on a plot,,,CO_359:0000363,INRA Verticilium severity scale (0-5),,,0,5,,,,,,,,,,, +,CO_359:0000362,VertNote_E_1to10,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000046,Verticilium infection severity,Biotic stress,Determination of severity of Verticilium infection,,VertNoteScale1,,Plant,Verticilium Infection,,,CO_359:0000059,Verticilium severity class,Estimation,Estimation of verticillum development severity on a plot,,,CO_359:0000361,INRA Verticilium severity scale (0-10),Ordinal,,0,10,,,,,,,,,,, +,CO_359:0000364,VertNote_E_1to5,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000046,Verticilium infection severity,Biotic stress,Determination of severity of Verticilium infection,,VertNoteScale1,,Plant,Verticilium Infection,,,CO_359:0000059,Verticilium severity class,Estimation,Estimation of verticillum development severity on a plot,,,CO_359:0000363,INRA Verticilium severity scale (0-5),Ordinal,,0,5,,,,,,,,,,, ,CO_359:0000367,ResVertWilt_E_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000365,Verticilium wilt susceptibility,Biotic stress,"Susceptibility to verticillium wilt, (Verticillium dahliae) kleb.",VERT_WILT,VertWilt,,Plant,Verticillium wilt susceptibility,Standard,,CO_359:0000366,Verticilium wilt susceptibility class,Estimation,Observe susceptibility to verticillium wilt susceptibility and rate it.,,,CO_359:0000086,ISU Susceptibility scale (1-9),Ordinal,,,,,"1 (1=resistant, 9=susceptible)","2 (1=resistant, 9=susceptible)","3 (1=resistant, 9=susceptible)","4 (1=resistant, 9=susceptible)","5 (1=resistant, 9=susceptible)","6 (1=resistant, 9=susceptible)","7 (1=resistant, 9=susceptible)","8 (1=resistant, 9=susceptible)","9 (1=resistant, 9=susceptible)", ,CO_359:0000368,ResWhtRush_E_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000047,White rust susceptibility,Biotic stress,Susceptibility to white rust disease caused by Albugo tragopogonis,White Rust,WhBlistRustSus,,Plant,White blister rust susceptibility,Standard,,CO_359:0000060,White rust susceptibility class,Estimation,Observe susceptibility to white blister rust susceptibility and rate it.,,,CO_359:0000086,ISU Susceptibility scale (1-9),Ordinal,,,,,"1 (1=resistant, 9=susceptible)","2 (1=resistant, 9=susceptible)","3 (1=resistant, 9=susceptible)","4 (1=resistant, 9=susceptible)","5 (1=resistant, 9=susceptible)","6 (1=resistant, 9=susceptible)","7 (1=resistant, 9=susceptible)","8 (1=resistant, 9=susceptible)","9 (1=resistant, 9=susceptible)", ,CO_359:0000371,AltBlightSus_E_0to9,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000369,Alternaria blight susceptibility,Biotic stress,Susceptibility to Alternaria blight disease caused by Alternaria helianthi and A. helianthinficiens.,,AltBlightSus,,Plant,Alternaria blight susceptibility,,,CO_359:0000370,Alternaria blight susceptibility class,Estimation,Observe susceptibility to alternaria blight and rate it.,,,CO_359:0000074,IBPGR Susceptibility scale (0-9),Ordinal,,,,,0= Absent,1= Very low or no visible sign of susceptibility,2= Very low to low susceptibility,3= Low susceptibility,4= Low to intermediate susceptibility,5= Intermediate susceptibility,6= Intermediate to high susceptibility,7= High susceptibility,8= High to very high susceptibility,9= Very high susceptibility @@ -107,10 +107,10 @@ Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage ,CO_359:0000386,FusWiltSus_E_0to9,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000384,Fusarium wilt susceptibility,Biotic stress,Susceptibility to Fusarium wilt disease caused by Fusarium spp.,,FusWiltSus,,Plant,Fusarium wilt susceptibility,,,CO_359:0000385,Fusarium wilt susceptibility class,Estimation,Observe susceptibility to fusarium wilt and rate it.,,,CO_359:0000074,IBPGR Susceptibility scale (0-9),Ordinal,,,,,0= Absent,1= Very low or no visible sign of susceptibility,2= Very low to low susceptibility,3= Low susceptibility,4= Low to intermediate susceptibility,5= Intermediate susceptibility,6= Intermediate to high susceptibility,7= High susceptibility,8= High to very high susceptibility,9= Very high susceptibility ,CO_359:0000389,HdWhiteMoldSus_E_0to9,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000387,Head white mold susceptibility,Biotic stress,Susceptibility of heads to white mold disease caused by Sclerotinia sclerotiorum,White rot susceptibility,HdWhiteMoldSus,,Head,White mold susceptibility,,,CO_359:0000388,Head white mold susceptibility class,Estimation,Observe susceptibility of heads to white mold and rate it.,,,CO_359:0000074,IBPGR Susceptibility scale (0-9),Ordinal,,,,,0= Absent,1= Very low or no visible sign of susceptibility,2= Very low to low susceptibility,3= Low susceptibility,4= Low to intermediate susceptibility,5= Intermediate susceptibility,6= Intermediate to high susceptibility,7= High susceptibility,8= High to very high susceptibility,9= Very high susceptibility ,CO_359:0000392,LfWhiteMoldSus_E_0to9,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000390,Leaf white mold susceptibility,Biotic stress,Susceptibility of leaves to white mold disease caused by Sclerotinia sclerotiorum,White rot susceptibility,LfWhiteMoldSus,,Leaf,White mold susceptibility,,,CO_359:0000391,Leaf white mold susceptibility class,Estimation,Observe susceptibility of leaves to white mold and rate it.,,,CO_359:0000074,IBPGR Susceptibility scale (0-9),Ordinal,,,,,0= Absent,1= Very low or no visible sign of susceptibility,2= Very low to low susceptibility,3= Low susceptibility,4= Low to intermediate susceptibility,5= Intermediate susceptibility,6= Intermediate to high susceptibility,7= High susceptibility,8= High to very high susceptibility,9= Very high susceptibility -,CO_359:0000395,OroShoN_Ct_shopplant,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000034,Orobanche shoot number,Biotic stress,Number of boomrape (Orobanche†spp.) shoots,Orobanche attacking rate,OroShoN,,Plant,Orobanche shoot number,Standard,,CO_359:0000393,Orobanche shoot number per plant,Counting,Count the number of orobanche shoots per sunflower plant.,,,CO_359:0000394,shoot/plant,Numerical,,,,,,,,,,,,,, -,CO_359:0000398,OroShoN_Ct_shoplot,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000034,Orobanche shoot number,Biotic stress,Number of boomrape (Orobanche†spp.) shoots,Orobanche attacking rate,OroShoN,,Plant,Orobanche shoot number,Standard,,CO_359:0000396,Orobanche shoot number per plot,Counting,Count the number of orobanche shoots per plot or measurement area.,,,CO_359:0000397,shoot/plot,Numerical,,,,,,,,,,,,,, -,CO_359:0000401,OroShoW_Ct_gplot,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000399,Orobanche shoot weight,Biotic stress,Weight of boomrape (Orobanche†spp.) shoots per unit of area.,,OroShoW,,Shoot,Orobanche infected shoot weight,,,CO_359:0000400,Orobanche shoot weight per plot,Measurement,Measure the orobanche shoots weight per plot or measurement area.,,,CO_359:0000068,g/plot,Numerical,,,,,,,,,,,,,, -,CO_359:0000403,OroSus_E_0to9,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000035,Orobanche susceptibility,Biotic stress,Susceptibility to boomrape (Orobanche†spp) infection,Orobanche frequency,OroSus,,Plant,Orobanche susceptibility,Standard,,CO_359:0000402,Orobanche susceptibility class,Estimation,Observe susceptibility to orobanche infection and rate it.,,,CO_359:0000074,IBPGR Susceptibility scale (0-9),Ordinal,,,,,0= Absent,1= Very low or no visible sign of susceptibility,2= Very low to low susceptibility,3= Low susceptibility,4= Low to intermediate susceptibility,5= Intermediate susceptibility,6= Intermediate to high susceptibility,7= High susceptibility,8= High to very high susceptibility,9= Very high susceptibility +,CO_359:0000395,OroShoN_Ct_shopplant,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000034,Orobanche shoot number,Biotic stress,Number of boomrape (Orobanche†spp.) shoots,Orobanche attacking rate,OroShoN,,Plant,Orobanche shoot number,Standard,,CO_359:0000393,Orobanche shoot number per plant,Counting,Count the number of orobanche shoots per sunflower plant.,,,CO_359:0000394,shoot/plant,Numerical,,,,,,,,,,,,,, +,CO_359:0000398,OroShoN_Ct_shoplot,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000034,Orobanche shoot number,Biotic stress,Number of boomrape (Orobanche†spp.) shoots,Orobanche attacking rate,OroShoN,,Plant,Orobanche shoot number,Standard,,CO_359:0000396,Orobanche shoot number per plot,Counting,Count the number of orobanche shoots per plot or measurement area.,,,CO_359:0000397,shoot/plot,Numerical,,,,,,,,,,,,,, +,CO_359:0000401,OroShoW_Ct_gplot,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000399,Orobanche shoot weight,Biotic stress,Weight of boomrape (Orobanche†spp.) shoots per unit of area.,,OroShoW,,Shoot,Orobanche infected shoot weight,,,CO_359:0000400,Orobanche shoot weight per plot,Measurement,Measure the orobanche shoots weight per plot or measurement area.,,,CO_359:0000068,g/plot,Numerical,,,,,,,,,,,,,, +,CO_359:0000403,OroSus_E_0to9,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000035,Orobanche susceptibility,Biotic stress,Susceptibility to boomrape (Orobanche†spp) infection,Orobanche frequency,OroSus,,Plant,Orobanche susceptibility,Standard,,CO_359:0000402,Orobanche susceptibility class,Estimation,Observe susceptibility to orobanche infection and rate it.,,,CO_359:0000074,IBPGR Susceptibility scale (0-9),Ordinal,,,,,0= Absent,1= Very low or no visible sign of susceptibility,2= Very low to low susceptibility,3= Low susceptibility,4= Low to intermediate susceptibility,5= Intermediate susceptibility,6= Intermediate to high susceptibility,7= High susceptibility,8= High to very high susceptibility,9= Very high susceptibility ,CO_359:0000406,PhomaSus_E_0to9,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000404,Phoma black stem susceptibility,Biotic stress,Susceptibility to Phoma black stem disease caused by Phoma macdonaldii,,PhomaSus,,Plant,Phoma black stem susceptibility,,,CO_359:0000405,Phoma black stem susceptibility class,Estimation,Observe susceptibility to phoma black stem and rate it.,,,CO_359:0000074,IBPGR Susceptibility scale (0-9),Ordinal,,,,,0= Absent,1= Very low or no visible sign of susceptibility,2= Very low to low susceptibility,3= Low susceptibility,4= Low to intermediate susceptibility,5= Intermediate susceptibility,6= Intermediate to high susceptibility,7= High susceptibility,8= High to very high susceptibility,9= Very high susceptibility ,CO_359:0000409,RhizoHdRotSus_E_0to9,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000407,Rhizopus head rot susceptibility,Biotic stress,Susceptibility to Rhizopus head rot disease caused by Rhizopus spp..,,RhizoHdRotSus,,Plant,Rhizopus head rot susceptibility,,,CO_359:0000408,Rhizopus head rot susceptibility class,Estimation,Observe susceptibility to rhizopus head rot susceptibility and rate it.,,,CO_359:0000074,IBPGR Susceptibility scale (0-9),Ordinal,,,,,0= Absent,1= Very low or no visible sign of susceptibility,2= Very low to low susceptibility,3= Low susceptibility,4= Low to intermediate susceptibility,5= Intermediate susceptibility,6= Intermediate to high susceptibility,7= High susceptibility,8= High to very high susceptibility,9= Very high susceptibility ,CO_359:0000412,RtWhiteMoldSus_E_0to9,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000410,Root white mold susceptibility,Biotic stress,Susceptibility of roots to white mold disease caused by Sclerotinia sclerotiorum,White rot susceptibility,RtWhiteMoldSus,,Root,White mold susceptibility,,,CO_359:0000411,Root white mold susceptibility class,Estimation,Observe susceptibility of roots to white mold and rate it.,,,CO_359:0000074,IBPGR Susceptibility scale (0-9),Ordinal,,,,,0= Absent,1= Very low or no visible sign of susceptibility,2= Very low to low susceptibility,3= Low susceptibility,4= Low to intermediate susceptibility,5= Intermediate susceptibility,6= Intermediate to high susceptibility,7= High susceptibility,8= High to very high susceptibility,9= Very high susceptibility @@ -156,7 +156,7 @@ Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage ,CO_359:0000531,BranchForm_E_code,,,,,,CGP,Loren Rieseberg,,EN,Sunflower,CO_359:0000528,Branching form,Morphological,Branching form,branching form,BranchForm,,Branch,Form,,,CO_359:0000529,Branch form class,Estimation,At flowering assess branching form,,,CO_359:0000530,CGP Branch form scale,Nominal,,,,,top-down,bottom-up,,,,,,,, ,CO_359:0000534,BranchHgt_M_cm,,,,,,CGP,Loren Rieseberg,,EN,Sunflower,CO_359:0000532,Branching height,Morphological,Height of the first branch appearing off the main stem,branching height,BranchHgt,,Branch,Height,,,CO_359:0000533,First branch height,Measurement,Measure the height of the first branch off main stem in cm at plant maturity,,,CO_359:0000063,cm,Numerical,,0,,,,,,,,,,,, ,CO_359:0000537,BranchInts_Cp_pct,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000535,Branching intensity,Morphological,Branching intensity,,BranchInts,,Branch,Intensity,,,CO_359:0000536,Branching intensity ratio,Computation,Ratio of the ramification length on the total plant height. percentage,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, -,CO_359:0000540,BranchDate_Ct_ymd,,,,,,CGP,Loren Rieseberg,,EN,Sunflower,CO_359:0000538,Branching start date,Morphological,Date of the first branch appearing off the main stem,branching date,BranchDate,,Branch,First observation date,,,CO_359:0000539,First branch date,Counting,The date the first branch appears off the main stem,,,CO_359:0000064,Date (yymmdd),Time,,,,,,,,,,,,,, +,CO_359:0000540,BranchDate_Ct_ymd,,,,,,CGP,Loren Rieseberg,,EN,Sunflower,CO_359:0000538,Branching start date,Morphological,Date of the first branch appearing off the main stem,branching date,BranchDate,,Branch,First observation date,,,CO_359:0000539,First branch date,Counting,The date the first branch appears off the main stem,,,CO_359:0000064,Date (yymmdd),Date,,,,,,,,,,,,,, ,CO_359:0000544,BranchType_E_cat,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000541,Branching type,Morphological,Branching type,,BranchType,,Branch,Type,,,CO_359:0000542,Branching type class,Estimation,Ramification type,,,CO_359:0000543,INRA Branching type scale,Nominal,,,,,"apical (bra, ramification located on the upper third of the plant)","median (brm, ramification located on the middle third of the plant)","basic (brb, ramification located on the lower third of the plant)","total (brt, ramification located on the whole plant)",,,,,, ,CO_359:0000547,BudDiam_M_cm,,,R2,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000545,Bud diameter,Morphological,Bud diameter,BUD_DIAM,BudDiam,,Bud,Diameter,Standard,,CO_359:0000546,Bud diameter,Measurement,Actual bud diameter in cm taken at r-2 stage.,,,CO_359:0000063,cm,Numerical,,0,,,,,,,,,,,, ,CO_359:0000550,CapitDiam_M_mm,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000548,Capitulum diameter,Morphological,Capitulum diameter,,CapitDiam,,Capitulum,Diameter,,,CO_359:0000549,Capitulum diameter,Measurement,Measured capitulum diameter,,,CO_359:0000089,mm,Numerical,,40,500,,,,,,,,,,, @@ -174,15 +174,15 @@ Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage ,CO_359:0000582,HeadShpVar_E_0to6,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000579,Head shape variability,Morphological,Head shape variability,HEAD_SHAPE_VAR,HeadShpVar,,Head,Shape variabiliy,Standard,,CO_359:0000580,Head shape variability class,Estimation,Head shape variability (see code),,,CO_359:0000581,ISU Head shape uniformity scale,Ordinal,,,,,"1 (1=uniform, 9=highly variable)","2 (1=uniform, 9=highly variable)","3 (1=uniform, 9=highly variable)","4 (1=uniform, 9=highly variable)","5 (1=uniform, 9=highly variable)","6 (1=uniform, 9=highly variable)","7 (1=uniform, 9=highly variable)","8 (1=uniform, 9=highly variable)","9 (1=uniform, 9=highly variable)", ,CO_359:0000586,HeadBranch_Ct_num,,,,,,CGP,Loren Rieseberg,,EN,Sunflower,CO_359:0000583,Heads per branch,Morphological,"On the mature plant, record the number of heads on the branch with the greatest number of heads",max. number of heads per branch,HeadBranch,,Branch,Number of heads,,,CO_359:0000584,Number of heads per branch (maximum),Counting,"On the mature plant, record the number of heads on the branch with the greatest number of heads",,,CO_359:0000585,heads/branch,Numerical,,,,,,,,,,,,,, ,CO_359:0000589,IntndLen_M_cm,,,R7,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000587,Internode length,Morphological,Internode length taken at mid stem,INTERNODE_LENGTH,IntndLen,,Internode,Length,Standard,,CO_359:0000588,Mid-stem internode length,Measurement,Internode length taken at mid stem and measured in cm. taken at r-7 stage or later.,,,CO_359:0000063,cm,Numerical,,0,,,,,,,,,,,, -,CO_359:0000593,LarHeadLoc_E_cat,,,R9,Standard,,UGA,J. M. Burke,,EN,Sunflower,CO_359:0000590,Largest head location,Morphological,Location of the largest flowering head,largest head location,LarHeadLoc,,Head,Location,,,CO_359:0000591,Largest head location class,Estimate,Identify the location of the largest flowering head,,,CO_359:0000592,UGA Head location scale,Nominal,,,,,Plant apex,Not at plant apex,,,,,,,, +,CO_359:0000593,LarHeadLoc_E_cat,,,R9,Standard,,UGA,J. M. Burke,,EN,Sunflower,CO_359:0000590,Largest head location,Morphological,Location of the largest flowering head,largest head location,LarHeadLoc,,Head,Location,,,CO_359:0000591,Largest head location class,Estimation,Identify the location of the largest flowering head,,,CO_359:0000592,UGA Head location scale,Nominal,,,,,Plant apex,Not at plant apex,,,,,,,, ,CO_359:0000597,LeafAng_M_d,,,,,,CGP,Loren Rieseberg,,EN,Sunflower,CO_359:0000594,Leaf angle,Morphological,Angle between leaf and stem,leaf angle,LeafAng,,Leaf,Angle,,,CO_359:0000595,Leaf angle,Measurement,"On the mature plant, measure the angle between leaf and stem.",,,CO_359:0000596,leaf to stem angle scale,,,,,,,,,,,,,,, ,CO_359:0000600,LfArea_Cp_cm2,,,R5,,,UBC,Marco Todesco,,EN,Sunflower,CO_359:0000024,Leaf area,Morphological,Determination of the leaf area,Leaf curved height,LfArea,,Leaf,Area,,,CO_359:0000598,Leaf area (leaf 9),Measurement,Fully expanded leaf 9 (or older fully expanded leaf if plant has less than 9 leaves) was scanned at 600 dpi.,,"H.C. Rowe, D.-K. Ro and L. H. Rieseberg. Response of Sunflower (Helianthus annuus L.) Leaf Surface Defenses to Exogenous Methyl Jasmonate.PLoS One. (2012), 7(5): e37191.",CO_359:0000599,leaf 9 area,Numerical,,,,,,,,,,,,,, ,CO_359:0000603,LeafCrvHgt_M_cm,,,R5,,,UBC,Marco Todesco,,EN,Sunflower,CO_359:0000024,Leaf area,Morphological,Determination of the leaf area,Leaf curved height,LfArea,,Leaf,Area,,,CO_359:0000601,Leaf area (curve height),Measurement,Fully expanded leaf 9 (or older fully expanded leaf if plant has less than 9 leaves) was scanned at 600 dpi.,,,CO_359:0000602,leaf curve height scale,,,,,,,,,,,,,,, ,CO_359:0000607,LeafClr_E_clr,,,R5,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000604,Leaf colour,Morphological,Leaf colour,LEAF_colour,LeafClr,,Leaf,Colour,Standard,,CO_359:0000605,Leaf colour at r-5 stage class,Computation,Leaf colour taken at r-5 stage.,,,CO_359:0000606,ISU leaf colour scale,Nominal,,,,,Yellow Green,Light Green,Green,Dark Green,Blue Green,,,,, ,CO_359:0000609,LeafNum_Ct_n,,,R9,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000025,Leaf count,Morphological,Number of leaves,LEAF_NUMBER,LeafNum,,Leaf,Number,Standard,,CO_359:0000608,Leaf number at r-9 stage,Counting,Number of leaves taken at r-9 stage (not recorded on wild species). actual count recorded.,,,CO_359:0000088,leaves/plant,Numerical,,,,,,,,,,,,,, -,CO_359:0000611,LeafNum_Ct_n,,Trial evaluation,R9,Standard,,"UGA, IBP, INRA","D. M. Wills and J. M. Burke, Julien Pietragalla",,EN,Sunflower,CO_359:0000025,Leaf count,Morphological,Number of leaves,LEAF_NUMBER,LeafNum,,Leaf,Number,Standard,,CO_359:0000610,Leaf number larger than 2 mm,Counting,Count leaves that are bigger than 2mm,,D. M. Wills and J. M. Burke. Quantitative Trait Locus Analysis of the Early Domestication of Sunflower. GENETICS (2007) vol. 176 no.4 2589-2599,CO_359:0000088,leaves/plant,Numerical,,,,,,,,,,,,,, -,CO_359:0000613,TotLeafArea_M_mm2,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000026,Leaf expansion,Phenological,Estimated leaf expansion,,ExpLeaf,,Leaf,Expansion,,,CO_359:0000612,Leaf expansion (Total area),Measurement,Sum of all estimated leaves area. does not takes into account the leaves localized on the collar. the leaves areas were estimated using linear regression to fill in missing data,,,CO_359:0000090,mm≤,Numerical,,0,1000,,,,,,,,,,, -,CO_359:0000616,TotLeafExp_M_mm2,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000614,Leaf expension,Morphological,Estimated leaf expansion,,TotLeafExp,,Leaf,Expansion,,,CO_359:0000615,Leaf expansion (Total difference),Measurement,Sum of all leaves expansions. the leaf expansion is estimated for a 24h interval. it is the difference between the total leaf area the current day (last_exp_tot_meastime) and the total leaf area the previous day. the leaf area was estimated using linear regression to fill in missing data.,,,CO_359:0000090,mm≤,Numerical,,0,1000,,,,,,,,,,, +,CO_359:0000611,LeafNum_Ct_nGT2mm,,Trial evaluation,R9,Standard,,"UGA, IBP, INRA","D. M. Wills and J. M. Burke, Julien Pietragalla",,EN,Sunflower,CO_359:0000025,Leaf count,Morphological,Number of leaves,LEAF_NUMBER,LeafNum,,Leaf,Number,Standard,,CO_359:0000610,Leaf number larger than 2 mm,Counting,Count leaves that are bigger than 2mm,,D. M. Wills and J. M. Burke. Quantitative Trait Locus Analysis of the Early Domestication of Sunflower. GENETICS (2007) vol. 176 no.4 2589-2599,CO_359:0000088,leaves/plant,Numerical,,,,,,,,,,,,,, +,CO_359:0000613,TotLeafArea_M_mm2,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000026,Leaf expansion,Phenological,Estimated leaf expansion,,ExpLeaf,,Leaf,Expansion,,,CO_359:0000612,Leaf expansion (Total area),Measurement,Sum of all estimated leaves area. does not takes into account the leaves localized on the collar. the leaves areas were estimated using linear regression to fill in missing data,,,CO_359:0000090,mm≤,Numerical,,0,1000,,,,,,,,,,, +,CO_359:0000616,TotLeafExp_M_mm2,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000614,Leaf expension,Morphological,Estimated leaf expansion,,TotLeafExp,,Leaf,Expansion,,,CO_359:0000615,Leaf expansion (Total difference),Measurement,Sum of all leaves expansions. the leaf expansion is estimated for a 24h interval. it is the difference between the total leaf area the current day (last_exp_tot_meastime) and the total leaf area the previous day. the leaf area was estimated using linear regression to fill in missing data.,,,CO_359:0000090,mm≤,Numerical,,0,1000,,,,,,,,,,, ,CO_359:0000618,HgtLargGrnLeaf_M_mm,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000027,Leaf length,Morphological,Determination of leaf length,Leaf height mid-width,LfLng,,Leaf,Length,,,CO_359:0000617,Leaf height (largest green leaf),Measurement,Height at which the largest green leaf is located relative to the ground,,,CO_359:0000089,mm,Numerical,,40,500,,,,,,,,,,, ,CO_359:0000620,HgtLowGrnLeaf_M_mm,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000027,Leaf length,Morphological,Determination of leaf length,Leaf height mid-width,LfLng,,Leaf,Length,,,CO_359:0000619,Leaf height (lowest green leaf),Measurement,Height at which the lowest green leaf is located relative to the ground,,,CO_359:0000089,mm,Numerical,,40,500,,,,,,,,,,, ,CO_359:0000623,LeafMaxHgt_M_cm,,,R5,,,UBC,Marco Todesco,,EN,Sunflower,CO_359:0000027,Leaf length,Morphological,Determination of leaf length,Leaf height mid-width,LfLng,,Leaf,Length,,,CO_359:0000621,Leaf length (max),Measurement,Fully expanded leaf 9 (or older fully expanded leaf if plant has less than 9 leaves) was scanned at 600 dpi.,,,CO_359:0000622,leaf length max scale,,,,,,,,,,,,,,, @@ -217,14 +217,14 @@ Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage ,CO_359:0000697,LeafLargWidth5_M_mm,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000032,Leaf width,Morphological,Determination of leaf width,Leaf width mid-height,LfWid,,Leaf,Width,,,CO_359:0000696,Leaf width (rank 5 above largest leaf),Measurement,Width of the leaf located 5 rank above the largest green leaf,,,CO_359:0000089,mm,Numerical,,40,500,,,,,,,,,,, ,CO_359:0000700,LigLen_M_mm,,,,,,CGP,Loren Rieseberg,,EN,Sunflower,CO_359:0000698,Ligule length,Morphological,Ligule length,ligule length,LigLen,,Ligule,Length,,,CO_359:0000699,Ligule length,Measurement,"On mature plant, measure liglen length in mm",,,CO_359:0000089,mm,Numerical,,40,500,,,,,,,,,,, ,CO_359:0000703,LigWidth_M_mm,,,,,,CGP,Loren Rieseberg,,EN,Sunflower,CO_359:0000701,Ligule width,Morphological,Ligule width,ligule width,LigWidth,,Ligule,Width,,,CO_359:0000702,Ligule width,Measurement,"On mature plant, measure liglen width in mm",,,CO_359:0000089,mm,Numerical,,40,500,,,,,,,,,,, -,CO_359:0000707,LigNum_Ct_num,,,,,,CGP,Loren Rieseberg,,EN,Sunflower,CO_359:0000704,Ligules per flower,Morphological,Number of ligules per flower,ligule number per flower,LigNum,,Ligule,Number,,,CO_359:0000705,Ligules per flower,Counting,"On mature plant, count the number of ligules per flower",,,CO_359:0000706,ligules/flower,,,,,,,,,,,,,,, +,CO_359:0000707,LigNum_Ct_num,,,,,,CGP,Loren Rieseberg,,EN,Sunflower,CO_359:0000704,Ligules per flower,Morphological,Number of ligules per flower,ligule number per flower,LigNum,,Ligule,Number,,,CO_359:0000705,Ligules per flower,Counting,"On mature plant, count the number of ligules per flower",,,CO_359:0000706,ligules/flower,Numerical,,,,,,,,,,,,,, ,CO_359:0000710,NoBranch_M_pct,,,R5,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000708,No plant branching,Morphological,No plant branching,BRANCHING_NONE,BrchNone,,Branch,Percentage,Standard,,CO_359:0000709,Plants without branches,Estimation,Percentage of plants that have no branches at stages r5-r9,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, -,CO_359:0000714,NodeTot_Ct_num,,,,,,"CGP, UBC","Loren Rieseberg, Nolan Kane",,EN,Sunflower,CO_359:0000711,Nodes quantity,Morphological,Total number of nodes,total number of nodes,NodeTot,,Node,Quantity,,,CO_359:0000712,Total number of nodes at maturity,Counting,Count the total number of nodes at maturity,,,CO_359:0000713,nodes/plant,,,,,,,,,,,,,,, -,CO_359:0000718,NodeOpp_Ct_num,,,R9,,,"CGP, UBC","Loren Rieseberg, H. Rowe",,EN,Sunflower,CO_359:0000715,Opposite node number,Morphological,Number of opposite nodes,number of opposite nodes,NodeOpp,,Node,Position,,,CO_359:0000716,Opposite nodes,Counting,Count the number of opposite nodes at maturity,,,CO_359:0000717,opposite nodes/plant,,,,,,,,,,,,,,, +,CO_359:0000714,NodeTot_Ct_num,,,,,,"CGP, UBC","Loren Rieseberg, Nolan Kane",,EN,Sunflower,CO_359:0000711,Nodes quantity,Morphological,Total number of nodes,total number of nodes,NodeTot,,Node,Quantity,,,CO_359:0000712,Total number of nodes at maturity,Counting,Count the total number of nodes at maturity,,,CO_359:0000713,nodes/plant,Numerical,,,,,,,,,,,,,, +,CO_359:0000718,NodeOpp_Ct_num,,,R9,,,"CGP, UBC","Loren Rieseberg, H. Rowe",,EN,Sunflower,CO_359:0000715,Opposite node number,Morphological,Number of opposite nodes,number of opposite nodes,NodeOpp,,Node,Position,,,CO_359:0000716,Opposite nodes,Counting,Count the number of opposite nodes at maturity,,,CO_359:0000717,opposite nodes/plant,Numerical,,,,,,,,,,,,,, ,CO_359:0000722,PedLen_M_n,,,R9,,,UBC,B. Moyers,,EN,Sunflower,CO_359:0000719,Peduncle length,Morphological,Length from the back of the apical flower head to the first leaf node,peduncle length,PedLen,,Peduncle,Length,,,CO_359:0000720,Peduncle length,Measurement,Measure the length from the back of the apical flower head to the first leaf node,,"J. M. Burke, S. Tang, S. J. Knapp and L. H. Rieseberg.Genetic Analysis of Sunflower Domestication. GENETICS (2002) vol. 161 no. 3 1257-1267",CO_359:0000721,peduncle length,Numerical,,,,,,,,,,,,,, ,CO_359:0000726,Petiole_E_len,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000723,Petiole,Morphological,Petiole length,PETIOLE_T,Petiole,,Petiole,Length,Standard,,CO_359:0000724,Petiole length at r-5 stage,Estimation,Petiole length (top or bottom of plants). taken at r-5 stage.,,,CO_359:0000725,petiole length,Nominal,,,,,long,short,sessile,,,,,,, ,CO_359:0000729,PetioleAng_E_cat,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000727,Petiole angle,Morphological,Petiole angle from stalk axis,PETIOLE_ANGLE,PetioleAng,,Petiole,Angle,Standard,,CO_359:0000728,Petiole angle from stalk axis,Estimation,Petiole angle from stalk axis.,,,CO_359:0000066,degree,Nominal,,,,,erect,semi-erect,horizontal,,,,,,, -,CO_359:0000733,PetSh_E_bool,,,,,,CGP,Loren Rieseberg,,EN,Sunflower,CO_359:0000730,Petiole sheath,Morphological,Presence of petiole sheath,presence of petiole sheath,PetSh,,Petiole,Sheath,,,CO_359:0000731,Petiole sheath presence,Estimation,Presence or absence of petiole sheath,,,CO_359:0000732,petiole sheath presence/absence scale,,,,,,,,,,,,,,, +,CO_359:0000733,PetSh_E_bool,,,,,,CGP,Loren Rieseberg,,EN,Sunflower,CO_359:0000730,Petiole sheath,Morphological,Presence of petiole sheath,presence of petiole sheath,PetSh,,Petiole,Sheath,,,CO_359:0000731,Petiole sheath presence,Estimation,Presence or absence of petiole sheath,,,CO_359:0000732,petiole sheath presence/absence scale,Nominal,,,,,,,,,,,,,, ,CO_359:0000736,PhyllLen_M_mm,,,,,,UBC,B. Moyers,,EN,Sunflower,CO_359:0000734,Phyllary length,Morphological,Length from attachment of phyllary to head to phyllary tip of a single ?typical? phyllary,phyllary length,PhyllLen,,Phyllary,Length,,,CO_359:0000735,Phyllary length,Measurement,"Measure phyllary length using calipers, mm",,,CO_359:0000089,mm,Numerical,,40,500,,,,,,,,,,, ,CO_359:0000739,PhyllWidth_M_mm,,,,,,UBC,B. Moyers,,EN,Sunflower,CO_359:0000737,Phyllary width,Morphological,Determination of width of a single ?typical? phyllary,phyllary width,PhyllWidth,,Phyllary,Width,,,CO_359:0000738,Phyllary width,Measurement,Measure phyllary width using calipers.,,,CO_359:0000089,mm,Numerical,,40,500,,,,,,,,,,, ,CO_359:0000742,Phytomel_E_cat,,,,Standard,,ISU,Phyto,,EN,Sunflower,CO_359:0000740,Phytomelanin presence,Morphological,Presence of phytomelanin (armored layer),PHYTOMELANIN,Phytomel,,Seed (pericarp),Phytomelanin,Standard,,CO_359:0000741,Phytomelanin presence,Estimation,Phytomelanin (armored layer),,,CO_359:0000093,presence/absence,Nominal,,,,,1=PRESENCE,0=ABSENCE,,,,,,,, @@ -245,7 +245,7 @@ Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage ,CO_359:0000784,PrimALen_M_n,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000782,Primary achene length,Morphological,Primary achene length,PRIMARY ACHENE LENGTH,PrimALen,,Achene,Length,Standard,,CO_359:0000783,Primary achene length,Measurement,Primary achene length also used when only one achene length is recorded,,,CO_359:0000089,mm,Numerical,,40,500,,,,,,,,,,, ,CO_359:0000787,PrimAStrpPos_E_cat,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000785,Primary achene stripe position,Morphological,Primary achene stripe position,PRIMARY ACHENE STRIPE POSITION,PrimAStrpPos,,Achene,Stripe position,Standard,,CO_359:0000786,Primary achene stripe position class,Estimation,Primary achene stripe position also used when on 1 value for achene stripe position is recorded,,,CO_359:0000080,ISU Achene stripe position scale,Nominal,,,,,both marginal and lateral,lateral,marginal,,,,,,, ,CO_359:0000790,PrimAWidth_M_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000788,Primary achene width class,Morphological,Primary achene width class,PRIMARY ACHENE WIDTH,PrimAWidth,,Achene,Width,Standard,,CO_359:0000789,Primary achene width class,Measurement,Primary achene width also used when only one achene width is recorded,,,CO_359:0000081,ISU Achene width scale (1-9),Ordinal,,,,,"1 (1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","2 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","3 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","4 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","5 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","6 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","7 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","8 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","9 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)", -,CO_359:0000794,TotPrimStemLeafNum_Ct_num,,,R5.1,,,UBC,Marco Todesco,,EN,Sunflower,CO_359:0000791,Primary stem leaves,Morphological,Number of leaves on primary stem,total leaf number,TotLeafNum,,Leaf,Number,,,CO_359:0000792,Leaf number on primary stem,Counting,Number of leaves on primary stem,,,CO_359:0000793,leaves/primary stem,,,,,,,,,,,,,,, +,CO_359:0000794,TotPrimStemLeafNum_Ct_num,,,R5.1,,,UBC,Marco Todesco,,EN,Sunflower,CO_359:0000791,Primary stem leaves,Morphological,Number of leaves on primary stem,total leaf number,TotLeafNum,,Leaf,Number,,,CO_359:0000792,Leaf number on primary stem,Counting,Number of leaves on primary stem,,,CO_359:0000793,leaves/primary stem,Numerical,,,,,,,,,,,,,, ,CO_359:0000798,RayFlrNum_E_cat,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000795,Ray flower abundance,Morphological,Ray flower abundance,,,,Ray flower,Abundance,Standard,,CO_359:0000796,Ray flower abundance class,Estimation,Ray flower abundance,,,CO_359:0000797,ISU Abundance scale,Ordinal,,,,,chrysanthemum,very many,many,few,absent,,,,, ,CO_359:0000802,RayFlrCol_E_cat,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000799,Ray flower colour,Morphological,Ray flower colour,RAY_FLOW_COLOUR,RayFlrCol,,Ray flower,Colour,Standard,,CO_359:0000800,Ray flower colour class,Estimation,Ray flower colour taken at r-5 stage.,,,CO_359:0000801,ISU Ray flower colour scale,Nominal,,,,,gaillardia rings,purple,red,orange,lemon yellow,pale yellow,,,, ,CO_359:0000806,RayFlrNum_Ct_num,,,,,,UGA,D. M. Wills and J. M. Burke,,EN,Sunflower,CO_359:0000803,Ray flower count,Morphological,Count of ray flowers,ray flower number,RayFlrNum,,Petal,Number,,,CO_359:0000804,Petal number,Counting,Count the petals (longer than 2mm) present on the disc flower,,D. M. Wills and J. M. Burke. Quantitative Trait Locus Analysis of the Early Domestication of Sunflower. GENETICS (2007) vol. 176 no.4 2589-2599,CO_359:0000805,petals/disk flower,Numerical,,,,,,,,,,,,,, @@ -262,11 +262,11 @@ Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage ,CO_359:0000842,SecAStrpPos_E_cat,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000840,Secondary achene stripe position,Morphological,Secondary achene stripe position,SECONDARY ACHENE STRIPE POSITION,SecAStrpPos,,Achene,Stripe position,Standard,,CO_359:0000841,Secondary achene stripe position class,Estimation,Secondary achene stripe position,,,CO_359:0000080,ISU Achene stripe position scale,Nominal,,,,,both marginal and lateral,lateral,marginal,,,,,,, ,CO_359:0000845,SecAWidth_M_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000843,Secondary achene width class,Morphological,Secondary achene width class,SECONDARY ACHENE WIDTH,SecAWidth,,Achene,Width,Standard,,CO_359:0000844,Secondary achene width class,Measurement,Secondary achene width,,,CO_359:0000081,ISU Achene width scale (1-9),Ordinal,,,,,"1 (1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","2 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","3 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","4 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","5 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","6 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","7 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","8 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)","9 1=1mm, 3=5mm, 5=7mm, 7=1cm, 9=1.3cm)", ,CO_359:0000848,SeedlLen_M_mm,,,VE,Standard,,UBC,H. Rowe,,EN,Sunflower,CO_359:0000846,Seedling length,Morphological,Length of seedling,seedling length,SeedlLen,,Seedling,Length,,,CO_359:0000847,Seedling length,Measurement,Seedlings are photographed with a scale object in the photo. images are imported into image j and measured using the freehand lines tool to determine length.,,,CO_359:0000089,mm,Numerical,,40,500,,,,,,,,,,, -,CO_359:0000852,LeafSLA_M_m2kg,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000849,Specific leaf area,Morphological,Specific leaf area (sla),,LeafSLA,,Leaf,Specific area,,,CO_359:0000850,Leaf area and dry weight ratio,Measurement,Ratio of the leaf area and the leaf dry weight.,,,CO_359:0000851,m≤/kg,Numerical,,0,100,,,,,,,,,,, +,CO_359:0000852,LeafSLA_M_m2kg,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000849,Specific leaf area,Morphological,Specific leaf area (sla),,LeafSLA,,Leaf,Specific area,,,CO_359:0000850,Leaf area and dry weight ratio,Measurement,Ratio of the leaf area and the leaf dry weight.,,,CO_359:0000851,m≤/kg,Numerical,,0,100,,,,,,,,,,, ,CO_359:0000855,PerStalkBrk_M_pct,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000853,Stalk breakage,Morphological,Determination of stalk breakage,PER_STALK_BREAK,PerStalkBrk,,Stem,Breakage,Standard,,CO_359:0000854,Stem breakage percentage,Measurement,Percent stalk breakage. evaluation taken when observed. indicates the percentage of broken stalks.,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, ,CO_359:0000859,StemBiomass_M_n,,,R9,,,UBC,B. Moyers,,EN,Sunflower,CO_359:0000856,Stem biomass,Morphological,Determination of stem biomass,stem biomass,StemBiomass,,Stem,Biomass,,,CO_359:0000857,Stem biomass,Measurement,"Dry the separated stem from the whole plant at ~60c for at least 4 days, or until biomass reaches a constant weight, then weigh.",,,CO_359:0000858,stem biomass,Numerical,,,,,,,,,,,,,, ,CO_359:0000863,StemBrkNote_E_0to10,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000860,Stem breakage,Morphological,Determination of stalk breakage,,StemBrkNote,,Stem,Breakage,,,CO_359:0000861,Stem breakage class,Estimation,Estimation of the amount of broken plant stem on the plot. range from 0 to 10 where 0 = 0% and 10 = 100%,,,CO_359:0000862,INRA Stem breakage scale,Ordinal,,0,10,,0=0% breakage,1=1-10% breakage,2=11-20% breakage,3=21-30% breakage,4=31-40% breakage,5 = 41 to 50% breakage,6 = 51 to 60% breakage,7 = 61 to 70% breakage,8 = 71 to 80% breakage,9 = 81 to 90% breakage -,CO_359:0000867,StemCol_E_col,,,R9,,,UBC,B. Moyers,,EN,Sunflower,CO_359:0000864,Stem colour,Morphological,Colour of stem,stem colour,StemCol,,Stem,Colour,,,CO_359:0000865,Stem colour class,Estimate,Score stem colour on basal stem section,,,CO_359:0000866,UBC Stem colour scale,Nominal,,,,,Yellow Green,Light Green,Green,Dark Green,Blue Green,purple green,,,, +,CO_359:0000867,StemCol_E_col,,,R9,,,UBC,B. Moyers,,EN,Sunflower,CO_359:0000864,Stem colour,Morphological,Colour of stem,stem colour,StemCol,,Stem,Colour,,,CO_359:0000865,Stem colour class,Estimation,Score stem colour on basal stem section,,,CO_359:0000866,UBC Stem colour scale,Nominal,,,,,Yellow Green,Light Green,Green,Dark Green,Blue Green,purple green,,,, ,CO_359:0000870,StemDens_Cp_n,,,R9,,,UBC,B. Moyers,,EN,Sunflower,CO_359:0000868,Stem density,Morphological,Density of a non-branch section of a stem,stem density,StemDens,,Stem,Density,,,CO_359:0000869,Stem density,Computation,"Place the stem section (from the basal or apical portion, removed from branches or leaves) into a full beaker of water and collect the displaced water and record its volume. dry the stem section in a forced air oven at 60c for at least 3-4 days. record the dry weight in grams, once it has reached constant weight.",,,CO_359:0000067,g,Numerical,,0,1500,,,,,,,,,,, ,CO_359:0000874,StemPub_E_cat,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000871,Stem pubescence,Morphological,Stem pubescence,STEM_PUB,StemPub,,Stem,Pubescence,Standard,,CO_359:0000872,Stem pubescence class,Estimation,Stem pubescence,,,CO_359:0000873,ISU Stem pubescence density scale,Nominal,,,,,dense,sparse,glabrous,,,,,,, ,CO_359:0000878,StemPubLen_E_cat,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000875,Stem pubescence length,Morphological,Stem pubescence length,STEM_PUB_LENGTH,StemPubLen,,Stem,Pubescence length,Standard,,CO_359:0000876,Stem pubescence length class,Estimation,Stem pubescence length taken at r-5 stage and recorded as a range.,,,CO_359:0000877,ISU Stem pubescence scale,Nominal,,,,,long,short,,,,,,,, @@ -284,7 +284,7 @@ Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage ,CO_359:0000909,AStripPres_E_0to1,,"Nursery, Trial evaluation",,Standard,,"ISU, IBP","Laura Marek, Julian Pietragalla",,EN,Sunflower,CO_359:0000907,Achene stripes,Morphological,Presence of stripes on the achene,,AStripPres,,Achene,Stripe presence,,,CO_359:0000908,Achene stripe presence,Estimation,Observe achene stripe presence and rate it.,,IBPGR-Descriptors,CO_359:0000069,General absence/presence scale,Nominal,,,,,0= Absent,1= Present,,,,,,,, ,CO_359:0000912,AWid_M_mm,,Trial evaluation,,,,"IBP, UBC","Julian Pietragalla, Marco Todesco",,EN,Sunflower,CO_359:0000910,Achene width,Morphological,Achene width,,AWid,,Achene,Width,,,CO_359:0000911,Achene width (average),Measurement,Measure achene width of n samples and record the average.,,,CO_359:0000089,mm,Numerical,,40,500,,,,,,,,,,, ,CO_359:0000914,BraLng_M_,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000011,Bract length,Morphological,Length of bracts,BRACT_LENGTH,BraLng,,Bract,Length,Standard,,CO_359:0000913,Bract length (average),Measurement,Measure bract length of n samples and record the average.,,,CO_359:0000089,mm,Numerical,,40,500,,,,,,,,,,, -,CO_359:0000917,HdAng_E_1to6,,Nursery evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000018,Head angle,Morphological,Head angle,STEM CURVE,HdAng,,Head,Angle,Standard,,CO_359:0000915,Head angle relative to horizontal class,Estimation,Observe head angle with respect to the horizontal at maturity and rate it. where 0 degree head is looking upward.,,IBPGR-Descriptors,CO_359:0000916,IBPGR Head angle scale (1-6),Ordinal,,,,,1= 0∞,2= 45∞,3= 90∞,4= 135∞,5= 180∞,6= 225∞,,,, +,CO_359:0000917,HdAng_E_1to6,,Nursery evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000018,Head angle,Morphological,Head angle,STEM CURVE,HdAng,,Head,Angle,Standard,,CO_359:0000915,Head angle relative to horizontal class,Estimation,Observe head angle with respect to the horizontal at maturity and rate it. where 0 degree head is looking upward.,,IBPGR-Descriptors,CO_359:0000916,IBPGR Head angle scale (1-6),Ordinal,,,,,1= 0∞,2= 45∞,3= 90∞,4= 135∞,5= 180∞,6= 225∞,,,, ,CO_359:0000919,HdDia_M_cm,,Trial evaluation,,,,"IBP, UGA, UBC","Julian Pietragalla, D. M. Wills and J. M. Burke, Marco Todesco",,EN,Sunflower,CO_359:0000019,Head diameter,Morphological,Diameter of complete inflorescence (head),flower diameter,HdDia,,Head,Diameter,,,CO_359:0000918,Head diameter (average),Measurement,Measure head diameter of n samples and record the average.,,,CO_359:0000063,cm,Numerical,,0,,,,,,,,,,,, ,CO_359:0000921,HdShp_E_1to4,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000020,Head shape,Morphological,Head shape,SECONDARY HEAD SHAPE,HdShp,,Head,Shape,Standard,,CO_359:0000053,Head shape class,Estimation,Observe head shape and rate it.,,IBPGR-Descriptors,CO_359:0000920,IBPGR Head shape scale,Nominal,,,,,1= Concave,2= Flat,3= Convex,4= Misshapen,,,,,, ,CO_359:0000922,HdSz_E_1to3,,Nursery evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000021,Head size,Morphological,Head size,,HdSz,,Head,Size,,,CO_359:0000054,Head size class,Estimation,Observe head size and rate it.,,IBPGR-Descriptors,CO_359:0000071,IBP Size scale (1-3),Ordinal,,,,,1= small,2= medium,3= large,,,,,,, @@ -302,20 +302,20 @@ Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage ,CO_359:0000952,Mat_dt_day2,,,R8,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000950,Days to maturity,Phenological,Days to maturity from planting date,MATURITY,Mat,,Plant,Maturity,Standard,,CO_359:0000951,Days to planting to maturity,Counting,Days to maturity from planting day to r-8 stage.,,,CO_359:0000065,days,Duration,,,,,,,,,,,,,, ,CO_359:0000954,FlrDate_Ct_ymd,,,R5.1,,,"UGA, UBC","D. M. Wills and J. M. Burke, Marco Todesco",,EN,Sunflower,CO_359:0000015,Flowering time,Phenological,Flowering time,Anthesis,Flr,,Plant,Flowering time,,,CO_359:0000953,Days to first receptive flower appearance,Counting,Count days from germination to first observation of a lower head with pollen and/or receptive stigmas present,,D. M. Wills and J. M. Burke. Quantitative Trait Locus Analysis of the Early Domestication of Sunflower. GENETICS (2007) vol. 176 no.4 2589-2599,CO_359:0000065,days,Duration,,,,,,,,,,,,,, ,CO_359:0000956,DayFlowUnif_E_1to9,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000016,Flowering uniformity,Phenological,Uniformity of flowering,DAY_FLOW_UNIF,FlrU,,Flower,Uniformity,Standard,,CO_359:0000051,Flowering uniformity class,Estimation,Observe flowering uniformity and rate it.,,IBPGR-Descriptors,CO_359:0000955,ISU Flowering uniformity scale,Ordinal,,,,,"1 (1=uniform, 9=highly variable)","2 (1=uniform, 9=highly variable)","3 (1=uniform, 9=highly variable)","4 (1=uniform, 9=highly variable)","5 (1=uniform, 9=highly variable)","6 (1=uniform, 9=highly variable)","7 (1=uniform, 9=highly variable)","8 (1=uniform, 9=highly variable)","9 (1=uniform, 9=highly variable)", -,CO_359:0000958,ExpLeaf_E_mm2,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000026,Leaf expansion,Phenological,Estimated leaf expansion,,ExpLeaf,,Leaf,Expansion,,,CO_359:0000957,Leaf expansion (Difference),Estimation,"Estimated leaf expansion. the leaf expansion if the difference of leaf area measured in the last 24h. because the leaf area was measured every two days, missing values were estimated using linear regression.",,,CO_359:0000090,mm≤,Numerical,,0,1000,,,,,,,,,,, +,CO_359:0000958,ExpLeaf_E_mm2,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000026,Leaf expansion,Phenological,Estimated leaf expansion,,ExpLeaf,,Leaf,Expansion,,,CO_359:0000957,Leaf expansion (Difference),Estimation,"Estimated leaf expansion. the leaf expansion if the difference of leaf area measured in the last 24h. because the leaf area was measured every two days, missing values were estimated using linear regression.",,,CO_359:0000090,mm≤,Numerical,,0,1000,,,,,,,,,,, ,CO_359:0000962,SenLeaf_E_col,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000959,Leaf senescence,Phenological,Senescence state of leaf,,SenLeaf,,Leaf,Senescence,,,CO_359:0000960,Leaf senescence class,Estimation,"Whether a leaf is senescent or not. a leaf is said to be senescent if it fell, if it?s dry or if half of its area is discoloured (loss of green colour). a value of 1 indicates a senescent leaf while a value of 0 is a not senescent.",,,CO_359:0000961,ISU leaf scenescent scale,Nominal,,,,,0= leaf not scenescent,1= leaf senescent,,,,,,,, ,CO_359:0000966,LeucAmp2_E_allele,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000963,Leucine aminopeptidase locus 2,Phenological,"Leucine aminopeptidase, locus 2 (leu2, e.c. 3.4.11.1)",LEUCINE AMINOPEPTIDASE - 2,LeucAmp2,,Dna,Sequence,Standard,,CO_359:0000964,Leu2 class,Estimation,"Leucine aminopeptidase, locus 2 (leu2, e.c. 3.4.11.1)",,,CO_359:0000965,Leu2 allele scale,Nominal,,,,,allele 2,allele 4,allele 6,,,,,,, ,CO_359:0000970,MatVar_E_days,,,R8,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000967,Maturation variability,Phenological,Days to maturity variability,MATURITY_VAR,MatVar,,Plant,Maturation variability,Standard,,CO_359:0000968,Maturition variability class,Measurement,Days to maturity variability. used with advanced generation lines.,,,CO_359:0000969,ISU Maturation uniformity scale,Ordinal,,,,,Highly Uniform,Moderate,Highly Variable,,,,,,, ,CO_359:0000974,PhotResp_E_cat,,,,Standard,,ISU,Laura Marek,,EN,Sunflower,CO_359:0000971,Photoperiodic response,Phenological,Photoperiod response,PHOTOPER_RESPONSE,PhotRes,,Plant,Photoperiodic response,Standard,,CO_359:0000972,Photoperiodic response class,Estimation,Photoperiod response,,,CO_359:0000973,ISU Photoperiodic response scale,Nominal,,,,,neutral,short day,long day,ambiphotoperiodic,,,,,, -,CO_359:0000978,EmergNote_E_1to5,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000975,Seedling emergence,Phenological,Seedling emergence,,EmergNote,,Seedling,Emergence,,,CO_359:0000976,Seedling emergence homogeneity class,Estimation,"Note a plot emergence homogeneity. ranks are from 1 to 5 (1= bad , 3 = average , 5 = good)",,,CO_359:0000977,INRA Seedling emergence uniformity scale (1-5),,,0,5,,,,,,,,,,, -,CO_359:0000981,Emer_date_ymd,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000979,Cotyledon emergence,Phenological,"Timing of emergence, when the fully expanded cotyledons appears above the soil surface",,Emer,,Plant,Emergence time,,,CO_359:0000980,Cotyledon emergence date,Estimation,"Record date of emergence, when the fully expanded cotyledons appears above the soil surface, usually referred as ve stage.",,,CO_359:0000064,Date (yymmdd),Time,,,,,,,,,,,,,, -,CO_359:0000983,InitFlr_date_ymd,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000015,Flowering time,Phenological,Flowering time,Anthesis,Flr,,Plant,Flowering time,,,CO_359:0000982,Date to 10% flowering,Computation,"Date of 10% flowering, corresponding to stage r5.1.",,,CO_359:0000064,Date (yymmdd),Time,,,,,,,,,,,,,, -,CO_359:0000985,Flr_date_ymd,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000015,Flowering time,Phenological,Flowering time,Anthesis,Flr,,Plant,Flowering time,,,CO_359:0000984,Date to 50% flowering,Computation,"Date of 50% flowering, corresponding to stage r5.5.",,,CO_359:0000064,Date (yymmdd),Time,,,,,,,,,,,,,, +,CO_359:0000978,EmergNote_E_1to5,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000975,Seedling emergence,Phenological,Seedling emergence,,EmergNote,,Seedling,Emergence,,,CO_359:0000976,Seedling emergence homogeneity class,Estimation,"Note a plot emergence homogeneity. ranks are from 1 to 5 (1= bad , 3 = average , 5 = good)",,,CO_359:0000977,INRA Seedling emergence uniformity scale (1-5),Ordinal,,0,5,,,,,,,,,,, +,CO_359:0000981,Emer_date_ymd,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000979,Cotyledon emergence,Phenological,"Timing of emergence, when the fully expanded cotyledons appears above the soil surface",,Emer,,Plant,Emergence time,,,CO_359:0000980,Cotyledon emergence date,Estimation,"Record date of emergence, when the fully expanded cotyledons appears above the soil surface, usually referred as ve stage.",,,CO_359:0000064,Date (yymmdd),Date,,,,,,,,,,,,,, +,CO_359:0000983,InitFlr_date_ymd,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000015,Flowering time,Phenological,Flowering time,Anthesis,Flr,,Plant,Flowering time,,,CO_359:0000982,Date to 10% flowering,Computation,"Date of 10% flowering, corresponding to stage r5.1.",,,CO_359:0000064,Date (yymmdd),Date,,,,,,,,,,,,,, +,CO_359:0000985,Flr_date_ymd,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000015,Flowering time,Phenological,Flowering time,Anthesis,Flr,,Plant,Flowering time,,,CO_359:0000984,Date to 50% flowering,Computation,"Date of 50% flowering, corresponding to stage r5.5.",,,CO_359:0000064,Date (yymmdd),Date,,,,,,,,,,,,,, ,CO_359:0000987,InitFlr_dto_day,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000015,Flowering time,Phenological,Flowering time,Anthesis,Flr,,Plant,Flowering time,,,CO_359:0000986,Days to 10% flowering,Computation,"Compute number of days required from sowing (or emergence) to 10% flowering, corresponding to stage r5.1.",,,CO_359:0000065,days,Duration,,,,,,,,,,,,,, ,CO_359:0000989,Flr_dto_day,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000015,Flowering time,Phenological,Flowering time,Anthesis,Flr,,Plant,Flowering time,,,CO_359:0000988,Days to 50% flowering,Computation,"Compute number of days required from sowing (or emergence) to 50% flowering, corresponding to stage r5.5.",,,CO_359:0000065,days,Duration,,,,,,,,,,,,,, ,CO_359:0000990,FlrU_E_1to9,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000016,Flowering uniformity,Phenological,Uniformity of flowering,DAY_FLOW_UNIF,FlrU,,Flower,Uniformity,Standard,,CO_359:0000051,Flowering uniformity class,Estimation,Observe flowering uniformity and rate it.,,IBPGR-Descriptors,CO_359:0000075,IBPGR Uniformity scale (1-9),Ordinal,,,,,1= Extremely variable to fairly variable,2= Extremely variable,3= Fairly variable,4= Fairly variable to intermediate,5= Intermediate,6= Intermediate to fairly uniform,7= Fairly uniform,8= Fairly uniform to extremely uniform,9= Extremely uniform, ,CO_359:0000992,Mat_date_ymd,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000033,Maturity time,Phenological,"Timing of maturity, when the bracts become yellow and brown",,Mat,,Plant,Maturity time,,,CO_359:0000991,Maturity date,Estimation,"Record date of maturity, when the bracts become yellow and brown. this stage is regarded as - physiological maturity, r9 stage.",,,CO_359:0000064,Date (yymmdd),Time,,,,,,,,,,,,,, + physiological maturity, r9 stage.",,,CO_359:0000064,Date (yymmdd),Date,,,,,,,,,,,,,, ,CO_359:0000994,Mat_dt_day,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000033,Maturity time,Phenological,"Timing of maturity, when the bracts become yellow and brown",,Mat,,Plant,Maturity time,,,CO_359:0000993,Days to sowing to maturity,Computation,Compute number of days required from sowing (or emergence) to maturity.,,,CO_359:0000065,days,Duration,,,,,,,,,,,,,, ,CO_359:0000997,MatU_E_1to9,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0000995,Maturity uniformity,Phenological,Uniformity of maturity,,MatU,,Head,Maturity uniformity,,,CO_359:0000996,Maturity uniformity class,Estimation,Observe flowering maturity and rate it.,,IBPGR-Descriptors,CO_359:0000075,IBPGR Uniformity scale (1-9),Ordinal,,,,,1= Extremely variable to fairly variable,2= Extremely variable,3= Fairly variable,4= Fairly variable to intermediate,5= Intermediate,6= Intermediate to fairly uniform,7= Fairly uniform,8= Fairly uniform to extremely uniform,9= Extremely uniform, ,CO_359:0001000,LeafCID_M_13c12c,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000998,Leaf carbon isotopes,Physiological,Leaf carbon isotope discrimination,,LeafCID,,Leaf,Isotope,,,CO_359:0000999,Leaf carbon isotope descrimination,Measurement,"Ratio of the carbon isotopes 13c/12c in plant material, relative to the same ratio in the atmosphere.",,,CO_359:0000094,ratio,Numerical,,10,30,,,,,,,,,,, @@ -323,15 +323,15 @@ Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage ,CO_359:0001006,LeafOsmAdj_M_mpa,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0001004,Leaf osmostic adjustment,Physiological,Determination of leaf osmostic adjustment,,LeafOsmAdj,,Leaf,Osomotic adjustment,,,CO_359:0001005,Osmotic adjustment,Measurement,The osmotical adjustment reflects the leaf solute accumulation in response to water stress. it is the ratio of op100 in control condition to op100 in water stress condition. the value is null for control plants.,,,CO_359:0000091,Mpa,Numerical,,-2,0,,,,,,,,,,, ,CO_359:0001008,HiLeafWiltPos_Ct_num,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000028,Leaf position,Physiological,Leaf position,,HiLeafWiltPos,,Leaf,Postion,,,CO_359:0001007,Leaf rank highest wilted leaf,Counting,"Rank of the highest wilted leaf. the rank is measured starting from bottom, all leaves are included (green, yellow or dry). the cotyledon are not accounted for.",,,CO_359:0000087,kg/ha,Numerical,,0,70,,,,,,,,,,, ,CO_359:0001012,TranspTot_M_gmm2,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0001009,Plant transpiration,Physiological,Total plant transpiration,,TranspTot,,Plant,Transpiration,,,CO_359:0001010,Plant transpiration 24h.,Estimation,"Total plant transpiration estimated for the last 24h. the amount of water lost is estimated by computing the difference in pot weight after watering on day n and pot weight before watering on day n+1. to take into account the amount of foliage through which the water - is lost this value is then divided by the mean total leaf area between the two days.",,,CO_359:0001011,g/mm≤,Numerical,,-1,1,,,,,,,,,,, -,CO_359:0001016,FTSW_M_num,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0001013,Transpirable soil water,Physiological,Determination of transpirable soil water,,FTSW,,Soil,Water content,,,CO_359:0001014,Soil water constraint,Measurement,Reflect the soil water constraint,,,CO_359:0001015,soil water content scale,,,0,1,,,,,,,,,,, + is lost this value is then divided by the mean total leaf area between the two days.",,,CO_359:0001011,g/mm≤,Numerical,,-1,1,,,,,,,,,,, +,CO_359:0001016,FTSW_M_num,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0001013,Transpirable soil water,Physiological,Determination of transpirable soil water,,FTSW,,Soil,Water content,,,CO_359:0001014,Soil water constraint,Measurement,Reflect the soil water constraint,,,CO_359:0001015,soil water content scale,Nominal,,0,1,,,,,,,,,,, ,CO_359:0001020,CTmp_M_C,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0001017,Canopy temperature,Physiological,Temperature of the canopy,,CTmp,,Canopy,Temperature,,,CO_359:0001018,Canopy temperature,Measurement,Proceed following the protocol for canopy temperature.,,,CO_359:0001019,Degrees Celsius,Numerical,,,,,,,,,,,,,, -,CO_359:0001021,FlrGlySus_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,15-Dec-2017,EN,Sunflower,CO_359:0000017,Glyphosate susceptibility,Physiological,Susceptibility to herbicide glyphosate,,VegGlySus,,Plant,Glyphosate susceptibility at vegetative stage.,,,CO_359:0000052,Glyphosate susceptibility class,Estimation,"Observe the plant susceptibility to herbicide, and rate it from tolerant/resistant to susceptible.",,,CO_359:0000072,IBP Susceptibility general scale (1-5),Ordinal,,,,,1= No visible damage,2= Tolerant,3= Moderately tolerant,4= Susceptible,5= Highly susceptible,,,,, -,CO_359:0001022,VegGlySus_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,15-Dec-2017,EN,Sunflower,CO_359:0000017,Glyphosate susceptibility,Physiological,Susceptibility to herbicide glyphosate,,VegGlySus,,Plant,Glyphosate susceptibility at vegetative stage.,,,CO_359:0000052,Glyphosate susceptibility class,Estimation,"Observe the plant susceptibility to herbicide, and rate it from tolerant/resistant to susceptible.",,,CO_359:0000072,IBP Susceptibility general scale (1-5),Ordinal,,,,,1= No visible damage,2= Tolerant,3= Moderately tolerant,4= Susceptible,5= Highly susceptible,,,,, -,CO_359:0001024,FlrImizSus_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,15-Dec-2017,EN,Sunflower,CO_359:0000022,Imidazolinone susceptibility,Physiological,Susceptibility to herbicide imidazolinone,,VegImizSus,,Plant,Imidazolinone susceptibility at vegetative stage.,,,CO_359:0001023,Imidazolinone susceptibility at flowering stage class,Estimation,"Observe the plant susceptibility to herbicide, and rate it from tolerant/resistant to susceptible.",,,CO_359:0000072,IBP Susceptibility general scale (1-5),Ordinal,,,,,1= No visible damage,2= Tolerant,3= Moderately tolerant,4= Susceptible,5= Highly susceptible,,,,, -,CO_359:0001026,VegImizSus_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,15-Dec-2017,EN,Sunflower,CO_359:0000022,Imidazolinone susceptibility,Physiological,Susceptibility to herbicide imidazolinone,,VegImizSus,,Plant,Imidazolinone susceptibility at vegetative stage.,,,CO_359:0001025,Imidazolinone susceptibility at vegetative stage class,Estimation,"Observe the plant susceptibility to herbicide, and rate it from tolerant/resistant to susceptible.",,,CO_359:0000072,IBP Susceptibility general scale (1-5),Ordinal,,,,,1= No visible damage,2= Tolerant,3= Moderately tolerant,4= Susceptible,5= Highly susceptible,,,,, -,CO_359:0001028,FlrSulfUreaSus_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,15-Dec-2017,EN,Sunflower,CO_359:0000044,Sulfonylurea susceptibility,Physiological,Susceptibility to herbicide sulfonylurea,,VegSulfUreaSus,,Plant,Sulfonylurea susceptibility at vegetative stage.,,,CO_359:0001027,Sulfonylurea susceptibility at flowering stage class,Estimation,"Observe the plant susceptibility to herbicide, and rate it from tolerant/resistant to susceptible.",,,CO_359:0000072,IBP Susceptibility general scale (1-5),Ordinal,,,,,1= No visible damage,2= Tolerant,3= Moderately tolerant,4= Susceptible,5= Highly susceptible,,,,, -,CO_359:0001030,VegSulfUreaSus_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,15-Dec-2017,EN,Sunflower,CO_359:0000044,Sulfonylurea susceptibility,Physiological,Susceptibility to herbicide sulfonylurea,,VegSulfUreaSus,,Plant,Sulfonylurea susceptibility at vegetative stage.,,,CO_359:0001029,Sulfonylurea susceptibility at vegetative stage class,Estimation,"Observe the plant susceptibility to herbicide, and rate it from tolerant/resistant to susceptible.",,,CO_359:0000072,IBP Susceptibility general scale (1-5),Ordinal,,,,,1= No visible damage,2= Tolerant,3= Moderately tolerant,4= Susceptible,5= Highly susceptible,,,,, +,CO_359:0001021,FlrGlySus_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,15-Dec-17,EN,Sunflower,CO_359:0000017,Glyphosate susceptibility,Physiological,Susceptibility to herbicide glyphosate,,VegGlySus,,Plant,Glyphosate susceptibility at vegetative stage.,,,CO_359:0000052,Glyphosate susceptibility class,Estimation,"Observe the plant susceptibility to herbicide, and rate it from tolerant/resistant to susceptible.",,,CO_359:0000072,IBP Susceptibility general scale (1-5),Ordinal,,,,,1= No visible damage,2= Tolerant,3= Moderately tolerant,4= Susceptible,5= Highly susceptible,,,,, +,CO_359:0001022,VegGlySus_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,15-Dec-17,EN,Sunflower,CO_359:0000017,Glyphosate susceptibility,Physiological,Susceptibility to herbicide glyphosate,,VegGlySus,,Plant,Glyphosate susceptibility at vegetative stage.,,,CO_359:0000052,Glyphosate susceptibility class,Estimation,"Observe the plant susceptibility to herbicide, and rate it from tolerant/resistant to susceptible.",,,CO_359:0000072,IBP Susceptibility general scale (1-5),Ordinal,,,,,1= No visible damage,2= Tolerant,3= Moderately tolerant,4= Susceptible,5= Highly susceptible,,,,, +,CO_359:0001024,FlrImizSus_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,15-Dec-17,EN,Sunflower,CO_359:0000022,Imidazolinone susceptibility,Physiological,Susceptibility to herbicide imidazolinone,,VegImizSus,,Plant,Imidazolinone susceptibility at vegetative stage.,,,CO_359:0001023,Imidazolinone susceptibility at flowering stage class,Estimation,"Observe the plant susceptibility to herbicide, and rate it from tolerant/resistant to susceptible.",,,CO_359:0000072,IBP Susceptibility general scale (1-5),Ordinal,,,,,1= No visible damage,2= Tolerant,3= Moderately tolerant,4= Susceptible,5= Highly susceptible,,,,, +,CO_359:0001026,VegImizSus_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,15-Dec-17,EN,Sunflower,CO_359:0000022,Imidazolinone susceptibility,Physiological,Susceptibility to herbicide imidazolinone,,VegImizSus,,Plant,Imidazolinone susceptibility at vegetative stage.,,,CO_359:0001025,Imidazolinone susceptibility at vegetative stage class,Estimation,"Observe the plant susceptibility to herbicide, and rate it from tolerant/resistant to susceptible.",,,CO_359:0000072,IBP Susceptibility general scale (1-5),Ordinal,,,,,1= No visible damage,2= Tolerant,3= Moderately tolerant,4= Susceptible,5= Highly susceptible,,,,, +,CO_359:0001028,FlrSulfUreaSus_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,15-Dec-17,EN,Sunflower,CO_359:0000044,Sulfonylurea susceptibility,Physiological,Susceptibility to herbicide sulfonylurea,,VegSulfUreaSus,,Plant,Sulfonylurea susceptibility at vegetative stage.,,,CO_359:0001027,Sulfonylurea susceptibility at flowering stage class,Estimation,"Observe the plant susceptibility to herbicide, and rate it from tolerant/resistant to susceptible.",,,CO_359:0000072,IBP Susceptibility general scale (1-5),Ordinal,,,,,1= No visible damage,2= Tolerant,3= Moderately tolerant,4= Susceptible,5= Highly susceptible,,,,, +,CO_359:0001030,VegSulfUreaSus_E_1to5,,"Nursery, Trial evaluation",,,,IBP,Julian Pietragalla,15-Dec-17,EN,Sunflower,CO_359:0000044,Sulfonylurea susceptibility,Physiological,Susceptibility to herbicide sulfonylurea,,VegSulfUreaSus,,Plant,Sulfonylurea susceptibility at vegetative stage.,,,CO_359:0001029,Sulfonylurea susceptibility at vegetative stage class,Estimation,"Observe the plant susceptibility to herbicide, and rate it from tolerant/resistant to susceptible.",,,CO_359:0000072,IBP Susceptibility general scale (1-5),Ordinal,,,,,1= No visible damage,2= Tolerant,3= Moderately tolerant,4= Susceptible,5= Highly susceptible,,,,, ,CO_359:0001033,AImpHarv_M_pct,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0001031,Achene impurity,Quality,Seed impurities at harvest,,SeedImpHarv,,Achene,Impurites,,,CO_359:0001032,Achene impurity percentage,Measurement,Amount (percent) of seed impurities at harvest,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, ,CO_359:0001035,AYldNorm_M_kgha,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000023,Kernel yield,Quality,Kernel yield,,YldNormH2O,,Seed,Yield,,,CO_359:0001034,"Commercial kernel yield (2% impurities, 9% water content)",Measurement,"Dry and clean kernel yield according to commercial norms, 9% water content and 2% impurities.",,,CO_359:0000087,kg/ha,Numerical,,0,70,,,,,,,,,,, ,CO_359:0001037,AYldNormH2O_M_kgha,,,,,,INRA,Nicolas Langlade,,EN,Sunflower,CO_359:0000023,Kernel yield,Quality,Kernel yield,,YldNormH2O,,Seed,Yield,,,CO_359:0001036,Commercial kernel yield (9% water content),Measurement,Dry and clean kernel yield according to commercial norms relative to humidity 9% water content.,,,CO_359:0000087,kg/ha,Numerical,,0,70,,,,,,,,,,, @@ -353,4 +353,4 @@ Curation,Variable ID,Variable name,Variable synonyms,Context of use,Growth stage ,CO_359:0001083,MyristoleicC_M_pct,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0001081,Seed oil myristoleic acid content,Quality,Oil myristoleic acid content (14:1),,MyristoleicC,,Seed,Myristoleic acid content,,,CO_359:0001082,Myristoleic acid content,Measurement,Standard method for myristoleic acid content,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, ,CO_359:0001086,PalmitoleicC_M_pct,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0001084,Seed oil palmitoleic acid content,Quality,Oil palmitoleic acid content (16:1),,PalmitoleicC,,Seed,Palmitoleic acid content,,,CO_359:0001085,Palmitoleic acid content,Measurement,Standard method for palmitoleic acid content,,,CO_359:0000061,%,Numerical,0,0,100,,,,,,,,,,, ,CO_359:0001090,TTochoC_M_mgkg,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,CO_359:0001087,Seed oil tochopherol content,Quality,Oil total tochopherol content,,TTochoC,,Seed,Total tochopherol content,,,CO_359:0001088,Total Tochopherol content,Measurement,Standard method for total tochopherol content,,,CO_359:0001089,mg/kg,Numerical,,,,,,,,,,,,,, -,CO_359:0001182,AYldAdj_Cp_kgha,,Trial evaluation,,,,IBP,Julian Pietragalla,,EN,Sunflower,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, \ No newline at end of file +,CO_359:0001182,AYldAdj_Cp_kgha_OBSOLETE,,Trial evaluation,,Obsolete,,IBP,Julian Pietragalla,,EN,Sunflower,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,