preprocess.cfg

[logistics]
output_dir=/projects/EKOLEMEN/profile_predictor/joe_hiro_models/
# preprocessed_paper/
output_filename_base=cakenn_v2_preprocess
# astrainterpretive.h5
raw_data_filename=/projects/EKOLEMEN/profile_predictor/joe_hiro_models/cakenn_v2_and_scalars.h5
# /projects/EKOLEMEN/profile_predictor/sim_data/astraSims.h5

[shots]
min_shot=130000
max_shot=210000
test_index=0
val_index=5
excluded_runs=
;	20190628B
;	20130911

[settings]
# not a setting, should be removed
lookahead=1
# if no data for shot, pull shot and fill data with zero
zero_fill_signals= 
	ech_pwr_total
;	pinj
;	tinj
;	D_tot
;	bmspinj
;	bmstinj
;	H_tot
;	He_tot
;	N_tot
;	Ne_tot
# removes all shots with ECH
exclude_ech=False
ech_threshold=0.1
exclude_ich=False
ip_minimum=0.0e6
ip_maximum=10e7
deviation_cutoff=10
# above should be 20 for AUG for density and gas

[signals]
; this should be a superset of whatever you might use for testing different models
profiles_superset=
;	zipfit_etempfit_rho
;	zipfit_itempfit_rho
;	zipfit_trotfit_rho
;	zipfit_edensfit_rho
;	zipfit_zdensfit_rho
;	qpsi_EFIT01
	qinv
	p	
	j
	ne
	Te
	Ti
	Vtor
;	zeff_rho
;	PETOT_astrainterpretive
;	PITOT_astrainterpretive
;	TE_astrainterpretive
;	TI_astrainterpretive
;	NE_astrainterpretive
;	ANGF_astrainterpretive
;	NI_astrainterpretive
;	HE_astrainterpretive
;	XI_astrainterpretive
;	TE_astrapredictEPEDNNTGLFNNfullyZIPFIT
;	TI_astrapredictEPEDNNTGLFNNfullyZIPFIT
;	NE_astrapredictEPEDNNTGLFNNfullyZIPFIT
;	ANGF_astrapredictEPEDNNTGLFNNfullyZIPFIT
;	MU_astrapredictEPEDNNTGLFNNfullyZIPFIT

# if scalar is removed, doesn't add this data to dictionary
scalars_superset=
;	pinj
;	tinj
;	ipsiptargt
	ech_pwr_total
;	dstdenp
	gasA_voltage
;	gasA
;	gasB
;	gasC
;	gasD
	ip
;	betan_EFIT01
;	tribot_EFIT01
;	tritop_EFIT01
;	kappa_EFIT01
;	aminor_EFIT01
;	rmaxis_EFIT01
;	li_EFITRT2
;	volume_EFIT01
;	bt
;	dssdenest
;	Ar_tot
;	D_tot
;	H_tot
;	He_tot
;	N_tot
;	Ne_tot
;	Rzoben
;	Rzunt
;	Vol
;	integ(Ar
;	integ(D
;	integ(H
;	integ(He
;	integ(N
;	integ(Ne
	bmspinj
	bmstinj
;	betan_EFITRT2
;	qmin_EFITRT2
	PCBCOIL