segresnet mlflow support

[myron]

segresnet mlflow support

[Nic-Ma]

Hi @dongyang0122 , @drbeh ,

Could you please help review this PR? Ensure it can satisfy our requirements for the MLFlow URI.

Thanks in advance.

[dongyang0122]

Please update the PR as follows. Thanks!

1. In algo.py, add these two lines.
2. Create a new key in hyperparameter.yaml.
3. Pass mlflow_tracking_uri into train.py.
   • https://github.com/dongyang0122/research-contributions/blob/auto3dseg_update_mlflow_v2/auto3dseg/algorithm_templates/dints/scripts/train.py#L243C5-L243C24
   • https://github.com/dongyang0122/research-contributions/blob/auto3dseg_update_mlflow_v2/auto3dseg/algorithm_templates/dints/scripts/train.py#L533

Thanks.

[dongyang0122]

Please see my comment.

[drbeh]

@myron I would appreciate it if you can address the comment as soon as you can so we can use mlflow for segresnet in monai services. Thanks

[myron]

I've updated, please check

[dongyang0122]

The changes look good to me. Can you also update this file? Thanks.
https://github.com/myron/research-contributions/blob/updates/auto3dseg/metadata.json

[myron]

The changes look good to me. Can you also update this file? Thanks. https://github.com/myron/research-contributions/blob/updates/auto3dseg/metadata.json

Done.

[dongyang0122]

The changes look good to me. Can you also update this file? Thanks. https://github.com/myron/research-contributions/blob/updates/auto3dseg/metadata.json

Done.

Thanks.