diff --git a/src/bdchm/schema/bdchm.yaml b/src/bdchm/schema/bdchm.yaml index 013ab0b..347864d 100644 --- a/src/bdchm/schema/bdchm.yaml +++ b/src/bdchm/schema/bdchm.yaml @@ -504,6 +504,41 @@ classes: slots: - identity + DeviceExposure: + is_a: Entity + description: >- + DeviceExposures are records of a Person suggesting exposure to a foreign object. The source is typically physical objects used in procedures, measurements, or observations. + attributes: + device_concept: + range: DeviceExposureConceptEnum + description: The coded value for a device. Primarily SNOMED. The syntax for the enum may need work. + age_at_exposure_start: + range: integer + description: The Participant's age (expressed in days) at the exposure start date. + unit: + ucum_code: d + age_at_exposure_end: + range: integer + description: The Participant's age (expressed in days) at the exposure end date, if available. Otherwise equal to age_at_exposure_start. + unit: + ucum_code: d + exposure_provenance: + range: DeviceExposureProvenanceEnum + description: A value representing the provenance of the DeviceExposure record. From OMOP Device Types. + quantity: + range: float + description: Amount of device used. If not present in source, default to 1. + required: false + associated_participant: + range: Participant + description: A reference to the Participant to which the exposure is attributed. + associated_visit: + description: A reference to the Visit the exposure is associated with, if any. + range: Visit + required: false + slots: + - identity + DimensionalObservation: is_a: Observation description: A structured object that describes a single data item about the physical dimensions of an entity (e.g. length width, area), as generated through a point-in-time observation or measurement. @@ -2346,6 +2381,262 @@ enums: description: Ocular meaning: OMOP:40549429 + DeviceExposureConceptEnum: + description: Device codes from SNOMED. + see_also: + - https://bioregistry.io/registry/snomedct + - https://terminology.hl7.org/3.1.0/CodeSystem-v3-snomed-CT.html + - https://www.nlm.nih.gov/healthit/snomedct/index.html + - urn:oid:2.16.840.1.113883.6.96 + reachable_from: + source_ontology: bioregistry:snomedct + pv_formula: LABEL + + DeviceExposureProvenanceEnum: + description: Source of device exposure record + comments: Taken from OMOP Type Concept Domain + permissible_values: + CASE REPORT FORM: + description: Case Report Form + meaning: OMOP:32809 + CLAIM: + description: Claim + meaning: OMOP:32810 + CLAIM AUTHORIZATION: + description: Claim authorization + meaning: OMOP:32811 + CLAIM DISCHARGE RECORD: + description: Claim discharge record + meaning: OMOP:32812 + CLAIM ENROLMENT RECORD: + description: Claim enrolment record + meaning: OMOP:32813 + COST RECORD: + description: Cost record + meaning: OMOP:32814 + DEATH CERTIFICATE: + description: Death Certificate + meaning: OMOP:32815 + DENTAL CLAIM: + description: Dental claim + meaning: OMOP:32816 + EHR: + description: EHR + meaning: OMOP:32817 + EHR ADMINISTRATION RECORD: + description: EHR administration record + meaning: OMOP:32818 + EHR ADMISSION NOTE: + description: EHR admission note + meaning: OMOP:32819 + EHR ANCILLARY REPORT: + description: EHR ancillary report + meaning: OMOP:32820 + EHR BILLING RECORD: + description: EHR billing record + meaning: OMOP:32821 + EHR CHIEF COMPLAINT: + description: EHR chief complaint + meaning: OMOP:32822 + EHR DISCHARGE RECORD: + description: EHR discharge record + meaning: OMOP:32823 + EHR DISCHARGE SUMMARY: + description: EHR discharge summary + meaning: OMOP:32824 + EHR DISPENSING RECORD: + description: EHR dispensing record + meaning: OMOP:32825 + EHR EMERGENCY ROOM NOTE: + description: EHR emergency room note + meaning: OMOP:32826 + EHR ENCOUNTER RECORD: + description: EHR encounter record + meaning: OMOP:32827 + EHR EPISODE RECORD: + description: EHR episode record + meaning: OMOP:32828 + EHR INPATIENT NOTE: + description: EHR inpatient note + meaning: OMOP:32829 + EHR MEDICATION LIST: + description: EHR medication list + meaning: OMOP:32830 + EHR NOTE: + description: EHR note + meaning: OMOP:32831 + EHR NURSING REPORT: + description: EHR nursing report + meaning: OMOP:32832 + EHR ORDER: + description: EHR order + meaning: OMOP:32833 + EHR OUTPATIENT NOTE: + description: EHR outpatient note + meaning: OMOP:32834 + EHR PATHOLOGY REPORT: + description: EHR Pathology report + meaning: OMOP:32835 + EHR PHYSICAL EXAMINATION: + description: EHR physical examination + meaning: OMOP:32836 + EHR PLANNED DISPENSING RECORD: + description: EHR planned dispensing record + meaning: OMOP:32837 + EHR PERSCRIPTION: + description: EHR prescription + meaning: OMOP:32838 + EHR PERSCRIPTION ISSUE RECORD: + description: EHR prescription issue record + meaning: OMOP:32839 + EHR PROBLEM LIST: + description: EHR problem list + meaning: OMOP:32840 + EHR RADIOLOGY REPORT: + description: EHR radiology report + meaning: OMOP:32841 + EHR REFERRAL RECORD: + description: EHR referral record + meaning: OMOP:32842 + EXTERNAL CDM INSTANCE: + description: External CDM instance + meaning: OMOP:32843 + FACILITY CLAIM: + description: Facility claim + meaning: OMOP:32844 + FACILITY CLAIM DETAIL: + description: Facility claim detail + meaning: OMOP:32845 + FACILITY CLAIM HEADER: + description: Facility claim header + meaning: OMOP:32846 + GEOGRAPHIC ISOLATION RECORD: + description: Geographic isolation record + meaning: OMOP:32847 + GOVERNMENT REPORT: + description: Government report + meaning: OMOP:32848 + HEALTH INFORMATION EXCHANGE RECORD: + description: Health Information Exchange record + meaning: OMOP:32849 + HEALTH RISK ASSESSMENT: + description: Health Risk Assessment + meaning: OMOP:32850 + HEALTHCARE PROFESSIONAL FILLED SURVEY: + description: Healthcare professional filled survey + meaning: OMOP:32851 + HOSPITAL COST: + description: Hospital cost + meaning: OMOP:32852 + INPATIENT CLAIM: + description: Inpatient claim + meaning: OMOP:32853 + INPATIENT CLAIM DETAIL: + description: Inpatient claim detail + meaning: OMOP:32854 + INPATIENT CLAIM HEADER: + description: Inpatient claim header + meaning: OMOP:32855 + LAB: + description: Lab + meaning: OMOP:32856 + MAIL ORDER RECORD: + description: Mail order record + meaning: OMOP:32857 + NLP: + description: NLP + meaning: OMOP:32858 + OUTPATIENT CLAIM: + description: Outpatient claim + meaning: OMOP:32859 + OUTPATIENT CLAIM DETAIL: + description: Outpatient claim detail + meaning: OMOP:32860 + OUTPATIENT CLAIM HEADER: + description: Outpatient claim header + meaning: OMOP:32861 + PATIENT FILLED SURVEY: + description: Patient filled survey + meaning: OMOP:32862 + PATIENT OR PAYER PAID RECORD: + description: Patient or payer paid record + meaning: OMOP:32863 + PATIENT REPORTED COST: + description: Patient reported cost + meaning: OMOP:32864 + PATIENT SELF-REPORT: + description: Patient self-report + meaning: OMOP:32865 + PATIENT SELF-TESTED: + description: Patient self-tested + meaning: OMOP:705183 + PAYER SYSTEM RECORD (PAID PREMIUM): + description: Payer system record (paid premium) + meaning: OMOP:32866 + PAYER SYSTEM RECORD (PRIMARY PAYER): + description: Payer system record (primary payer) + meaning: OMOP:32867 + PAYER SYSTEM RECORD (SECONDARY PAYER): + description: Payer system record (secondary payer) + meaning: OMOP:32868 + PHARMACY CLAIM: + description: Pharmacy claim + meaning: OMOP:32869 + POINT OF CARE/EXPRESS LAB: + description: Point of care/express lab + meaning: OMOP:703249 + PRE-QUALIFICATION TIME PERIOD: + description: Pre-qualification time period + meaning: OMOP:32870 + PROFESSIONAL CLAIM: + description: Professional claim + meaning: OMOP:32871 + PROFESSIONAL CLAIM DETAIL: + description: Professional claim detail + meaning: OMOP:32872 + PROFESSIONAL CLAIM HEADER: + description: Professional claim header + meaning: OMOP:32873 + PROVIDER CHARGE LIST PRICE: + description: Provider charge list price + meaning: OMOP:32874 + PROVIDER FINANCIAL SYSTEM: + description: Provider financial system + meaning: OMOP:32875 + PROVIDER INCURRED COST RECORD: + description: Provider incurred cost record + meaning: OMOP:32876 + RANDOMIZATION RECORD: + description: Randomization record + meaning: OMOP:32877 + REFERENCE LAB: + description: Reference lab + meaning: OMOP:32878 + REGISTRY: + description: Registry + meaning: OMOP:32879 + STANDARD ALGORITHM: + description: Standard algorithm + meaning: OMOP:32880 + STANDARD ALGORITHM FROM CLAIMS: + description: Standard algorithm from claims + meaning: OMOP:32881 + STANDARD ALGORITHM FROM EHR: + description: Standard algorithm from EHR + meaning: OMOP:32882 + SURVEY: + description: Survey + meaning: OMOP:32883 + URGENT LAB: + description: Urgent lab + meaning: OMOP:32884 + US SOCIAL SECURITY DEATH MASTER FILE: + description: US Social Security Death Master File + meaning: OMOP:32885 + VISION CLAIM: + description: Vision claim + meaning: OMOP:32886 + SpecimenTypeEnum: name: SpecimenTypeEnum description: A high-level type of specimen, based on its derivation provenance (i.e. how far removed it is from the original sample extracted from a source).