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DESCRIPTION
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Package: echoplot
Type: Package
Title: echoverse module: Locus plot creation for fine-mapping and
colocalization studies
Version: 0.99.7
Authors@R:
c(person(given = "Brian",
family = "Schilder",
role = c("aut","cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0001-5949-2191")),
person(given = "Jack",
family = "Humphrey",
role = c("aut"),
email = "[email protected]",
comment = c(ORCID = "0000-0002-6274-6620")),
person(given = "Towfique",
family = "Raj",
role = c("aut"),
email = "[email protected]",
comment = c(ORCID = "0000-0002-9355-5704"))
)
Description: echoverse module: Locus plot creation for fine-mapping
and colocalization studies.
URL: https://github.com/RajLabMSSM/echoplot
BugReports: https://github.com/RajLabMSSM/echoplot/issues
Encoding: UTF-8
Depends: R (>= 4.0.0)
biocViews:
Genetics, FunctionalGenomics, SystemsBiology
Imports:
echodata,
echoannot,
echoLD,
methods,
ggplot2,
ggbio,
ggrepel,
ggnewscale,
stats,
patchwork,
DescTools,
GenomicRanges,
EnsDb.Hsapiens.v75,
ensembldb,
AnnotationFilter,
GenomicFeatures,
S4Vectors,
data.table,
dplyr,
pals
Suggests:
rworkflows,
markdown,
rmarkdown,
magick,
remotes,
knitr,
BiocStyle,
covr,
testthat (>= 3.0.0),
badger,
hexSticker,
utils,
Gviz,
stringr
Remotes:
github::RajLabMSSM/echodata,
github::RajLabMSSM/echoannot,
github::RajLabMSSM/echoLD
RoxygenNote: 7.2.3
VignetteBuilder: knitr
License: GPL-3
Config/testthat/edition: 3