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Question: format of distance restraints #33

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BelyaevaJuly opened this issue Nov 14, 2024 · 1 comment
Open

Question: format of distance restraints #33

BelyaevaJuly opened this issue Nov 14, 2024 · 1 comment

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@BelyaevaJuly
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Dear Developers,

I have a question regarding AlphaLink2 restraints.
Do you plan to introduce distance restraints that were implemented in AlphaLink (AlphaLink1)?

residueFrom,residueTo,meanDistance,standard deviation,distribution type (normal/log-normal)
12,135,15.0,5.0,normal

Best regards,
Julia

@lhatsk
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lhatsk commented Nov 19, 2024

Hi! We have a model that accepts arbitrary distance restraints but we haven't released it so far because it's not fully trained and thus performs a little worse. There are no plans atm to make it available. What distance would you like to have supported?

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