NAMESPACE

# Generated by roxygen2: do not edit by hand

export(.onload)
export(Mode)
export(XICMasterPlotFcn_)
export(catOSWruns_)
export(codenameTounimod)
export(filterOSWdb)
export(filterPQPdb)
export(filterSQMASSdb)
export(generateUniModMapping_)
export(getChromatogramDataPoints_)
export(getModificationPosition_)
export(getOSWData_)
export(getPepLibData_)
export(getRunID_)
export(getTransitionScores_)
export(getXIC)
export(log_setup)
export(osw_reports_visualization)
export(pairwise_comparison)
export(timesTwo)
export(unimodTocodename)
import(MazamaCoreUtils)
import(reticulate)
importFrom(DBI,dbConnect)
importFrom(DBI,dbDisconnect)
importFrom(DBI,dbExecute)
importFrom(DBI,dbExistsTable)
importFrom(MazamaCoreUtils,logger.error)
importFrom(MazamaCoreUtils,logger.info)
importFrom(MazamaCoreUtils,logger.isInitialized)
importFrom(MazamaCoreUtils,logger.setLevel)
importFrom(MazamaCoreUtils,logger.setup)
importFrom(MazamaCoreUtils,logger.trace)
importFrom(MazamaCoreUtils,logger.warn)
importFrom(RSQLite,SQLite)
importFrom(Rcpp,evalCpp)
importFrom(Rcpp,sourceCpp)
importFrom(crayon,blue)
importFrom(crayon,bold)
importFrom(crayon,magenta)
importFrom(crayon,red)
importFrom(crayon,underline)
importFrom(data.table,set)
importFrom(dbplyr,sql)
importFrom(dplyr,"%>%")
importFrom(dplyr,add_count)
importFrom(dplyr,arrange)
importFrom(dplyr,bind_rows)
importFrom(dplyr,collect)
importFrom(dplyr,distinct)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,mutate)
importFrom(dplyr,select)
importFrom(dplyr,tbl)
importFrom(dplyr,top_n)
importFrom(dplyr,ungroup)
importFrom(ggplot2,aes)
importFrom(ggplot2,element_text)
importFrom(ggplot2,geom_histogram)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_rect)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,guide_legend)
importFrom(ggplot2,guides)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_alpha_identity)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggpubr,as_ggplot)
importFrom(gridExtra,arrangeGrob)
importFrom(gridExtra,tableGrob)
importFrom(gridExtra,ttheme_default)
importFrom(mzR,chromatogramHeader)
importFrom(mzR,chromatograms)
importFrom(mzR,openMSfile)
importFrom(parallel,detectCores)
importFrom(parallel,mclapply)
importFrom(plyr,mapvalues)
importFrom(purrr,map)
importFrom(purrr,map_df)
importFrom(rlang,sym)
importFrom(signal,sgolayfilt)
importFrom(stringr,str_replace_all)
importFrom(tibble,rownames_to_column)
importFrom(tictoc,tic)
importFrom(tictoc,toc)
importFrom(tools,file_ext)
importFrom(xml2,read_xml)
importFrom(xml2,xml_attrs)
importFrom(xml2,xml_find_all)
importFrom(xml2,xml_ns)
useDynLib(mstools, .registration = TRUE)