diff --git a/.github/workflows/nextflow.yml b/.github/workflows/nextflow.yml
new file mode 100644
index 0000000..17e047b
--- /dev/null
+++ b/.github/workflows/nextflow.yml
@@ -0,0 +1,12 @@
+name: Run pipeline
+on:
+  push:
+    branches:
+      - "main"
+jobs:
+  example:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v3
+      - uses: nf-core/setup-nextflow@v1
+      - run: nextflow run ${GITHUB_WORKSPACE} --input data/test_samplesheet.csv 
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