diff --git a/README.md b/README.md index 28543ce..1684168 100644 --- a/README.md +++ b/README.md @@ -1,5 +1,13 @@ # nf-artist +[![Nextflow](https://img.shields.io/badge/nextflow%20DSL2-%E2%89%A523.04.0-23aa62.svg)](https://www.nextflow.io/) +[![Launch on Nextflow Tower](https://img.shields.io/badge/Launch%20%F0%9F%9A%80-Nextflow%20Tower-%234256e7)](https://tower.nf/launch?pipeline=https://github.com/Sage-Bionetworks-Workflows/nf-artist) +[![run with docker](https://img.shields.io/badge/run%20with-docker-0db7ed?labelColor=000000&logo=docker)](https://www.docker.com/) +![GitHub Actions CI Status](https://github.com/Sage-Bionetworks-Workflows/nf-artist/actions/workflows/ci.yml/badge.svg) +![GitHub Actions Workflow Test Status](https://github.com/Sage-Bionetworks-Workflows/nf-artist/actions/workflows/nextflow.yml/badge.svg) +![Container Scan Status](https://github.com/Sage-Bionetworks-Workflows/nf-artist/actions/workflows/scan-images.yml/badge.svg) + + A NextFlow pipeline to generate visualizations of multiplexed tissue imaging datasets. Initially developed for the [HTAN Data Portal](data.humantumoratlas.org). - Converts bioformats files into OME-TIFF