feat(openchallenges): filter platform, edam concept, organization by ids/slugs (backend) #507
Workflow file for this run
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| name: Schematic API CI | |
| on: | |
| pull_request: | |
| branches: | |
| - main | |
| env: | |
| NX_BRANCH: ${{ github.event.number }} | |
| NX_RUN_GROUP: ${{ github.run_id }} | |
| NX_CLOUD_AUTH_TOKEN: ${{ secrets.NX_CLOUD_AUTH_TOKEN }} | |
| NX_CLOUD_ENCRYPTION_KEY: ${{ secrets.NX_CLOUD_ENCRYPTION_KEY }} | |
| NX_CLOUD_ENV_NAME: 'linux' | |
| SONAR_TOKEN: ${{ secrets.SONAR_TOKEN }} | |
| DOCKER_USERNAME: ${{ github.actor }} | |
| DOCKER_PASSWORD: ${{ secrets.GITHUB_TOKEN }} | |
| jobs: | |
| pr: | |
| runs-on: ubuntu-22.04-4core-16GBRAM-150GBSSD | |
| # Runs this job if: | |
| # 1. Triggered by a PR | |
| # 2. The PR originate from the Schematic-API-Staging branch | |
| # 3. Targets the main branch | |
| if: | | |
| github.event_name == 'pull_request' && | |
| github.event.pull_request.base.ref == 'main' && | |
| github.event.pull_request.head.ref == 'Schematic-API-Staging' | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| ref: ${{ github.event.pull_request.head.ref }} | |
| repository: ${{ github.event.pull_request.head.repo.full_name }} | |
| fetch-depth: 0 | |
| - name: Derive appropriate SHAs for base and head for `nx affected` commands | |
| uses: nrwl/nx-set-shas@v3 | |
| - name: Set up Yarn cache | |
| uses: actions/cache@v3 | |
| with: | |
| path: '/tmp/.yarn/cache' | |
| key: ${{ runner.os }}-yarn-${{ hashFiles('**/yarn.lock') }} | |
| restore-keys: | | |
| ${{ runner.os }}-yarn- | |
| - name: Set up Poetry cache | |
| uses: actions/cache@v3 | |
| with: | |
| path: '/tmp/.cache/pypoetry' | |
| key: ${{ runner.os }}-poetry-${{ hashFiles('**/poetry.lock') }} | |
| - name: Set up venv cache | |
| uses: actions/cache@v3 | |
| with: | |
| path: | | |
| /tmp/.local/share/virtualenv | |
| **/.venv | |
| key: ${{ runner.os }}-venv-${{ hashFiles('**/poetry.lock') }} | |
| - name: Set up Gradle cache | |
| uses: actions/cache@v3 | |
| with: | |
| path: | | |
| /tmp/.gradle/caches | |
| /tmp/.gradle/wrapper | |
| key: ${{ runner.os }}-gradle-${{ hashFiles('**/*.gradle*', '**/gradle-wrapper.properties') }} | |
| restore-keys: | | |
| ${{ runner.os }}-gradle- | |
| - name: Install the Dev Container CLI | |
| run: npm install -g @devcontainers/[email protected] | |
| - name: Start the dev container | |
| run: | | |
| mkdir -p \ | |
| /tmp/.yarn/cache \ | |
| /tmp/.cache/R/renv/cache \ | |
| /tmp/.cache/pypoetry \ | |
| /tmp/.local/share/virtualenv \ | |
| /tmp/.gradle/caches \ | |
| /tmp/.gradle/wrapper | |
| devcontainer up \ | |
| --mount type=bind,source=/tmp/.yarn/cache,target=/workspaces/sage-monorepo/.yarn/cache \ | |
| --mount type=bind,source=/tmp/.cache/R/renv/cache,target=/home/vscode/.cache/R/renv/cache \ | |
| --mount type=bind,source=/tmp/.cache/pypoetry,target=/home/vscode/.cache/pypoetry \ | |
| --mount type=bind,source=/tmp/.local/share/virtualenv,target=/home/vscode/.local/share/virtualenv \ | |
| --mount type=bind,source=/tmp/.gradle/caches,target=/home/vscode/.gradle/caches \ | |
| --mount type=bind,source=/tmp/.gradle/wrapper,target=/home/vscode/.gradle/wrapper \ | |
| --workspace-folder ../sage-monorepo | |
| - name: Prepare the workspace | |
| run: | | |
| devcontainer exec --workspace-folder ../sage-monorepo bash -c " | |
| sudo chown -R vscode:vscode \ | |
| /workspaces/sage-monorepo \ | |
| /home/vscode/.cache \ | |
| /home/vscode/.local \ | |
| /home/vscode/.gradle \ | |
| && . ./dev-env.sh \ | |
| && workspace-install" | |
| - name: Set up synapse config | |
| run: | | |
| import yaml | |
| secrets = { | |
| "synapse_token": "${{ secrets.SCHEMATIC_SYNAPSE_TOKEN }}", | |
| "test_project": "${{ secrets.SCHEMATIC_TEST_PROJECT }}", | |
| "test_dataset": "${{ secrets.SCHEMATIC_TEST_DATASET }}", | |
| "test_manifest": "${{ secrets.SCHEMATIC_TEST_MANIFEST }}", | |
| "test_asset_view": "${{ secrets.SCHEMATIC_TEST_ASSET_VIEW }}" | |
| } | |
| for key, secret in secrets.items(): | |
| assert secret is not None | |
| assert isinstance(secret, str) | |
| assert len(secret) > 0 | |
| with open('apps/schematic/api/schematic_api/test/data/synapse_config.yaml', 'w') as file: | |
| yaml.dump(secrets, file) | |
| shell: python | |
| - name: Set up google credentials | |
| env: | |
| SERVICE_ACCOUNT_CREDS: ${{ secrets.SCHEMATIC_SERVICE_ACCT_CREDS }} | |
| run: | | |
| import json | |
| import os | |
| credentials_dict = json.loads(os.environ["SERVICE_ACCOUNT_CREDS"]) | |
| credentials_file_name = "apps/schematic/api/schematic_service_account_creds.json" | |
| with open(credentials_file_name, 'w', encoding='utf-8') as f: | |
| json.dump(credentials_dict, f, ensure_ascii=False, indent=4) | |
| shell: python | |
| - name: Test the affected projects (all) | |
| run: | | |
| devcontainer exec --workspace-folder ../sage-monorepo bash -c ". ./dev-env.sh \ | |
| && nx affected --target=test-all" | |
| - name: Remove the dev container | |
| run: docker rm -f sage_devcontainer |