From 63f0aa6fa058d40720b19ecfd7864df842ff0c2a Mon Sep 17 00:00:00 2001
From: Sam Sims <samsimss98@gmail.com>
Date: Fri, 22 Sep 2023 13:51:14 +0100
Subject: [PATCH] readme

---
 README.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/README.md b/README.md
index f6680bc..ea735f0 100644
--- a/README.md
+++ b/README.md
@@ -75,7 +75,7 @@ krakenXtract -k <kraken_output> -i <R1_fastq_file> -i <R2_fastq_file> -t <taxono
 ```
 If you want to extract all children of a taxon:
 ```bash
-krakenXtract -k <kraken_output> -r <kraken_report> -i <R1_fastq_file> -i <R2_fastq_file> -t <taxonomic_id> --children -o <R1_output_file> -o <R2_output_file>
+krakenXtract -k <kraken_output> -r <kraken_report> -i <fastq_file> -t <taxonomic_id> --children -o <output_file>
 ```
 
 ### Arguments: