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DESCRIPTION
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DESCRIPTION
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Package: mopa
Depends:
R (>= 3.5.0),
raster,
sp
Imports:
splancs,
spam,
spatstat.geom (>= 1.65),
sampling,
dismo,
rpart,
tree,
e1071,
earth,
randomForest,
PresenceAbsence,
lattice,
graphics,
grDevices,
gtools,
ranger,
abind,
transformeR
Suggests:
rJava (>= 0.5-0),
caret (>= 6.0-76),
climate4R.datasets,
visualizeR
Type: Package
Title: Species Distribution MOdeling with Pseudo-Absences
Version: 1.1.2
Date: 2023-11-27
Authors@R: c(person("Maialen", "Iturbide", role = c("aut", "cre"), email = "[email protected]"),
person("Joaquin", "Bedia", role = "ctb"),
person("SantanderMetGroup", "http://meteo.unican.es", role = "ctb"))
Description: Tools for transferable species distribution modeling and pseudo-absence
data generation allowing the straightforward design of relatively complex experiments
with multiple factors affecting the uncertainty (variability) of SDM outputs
(pseudo-absence sample, climate projection, modeling algorithm, etc.), and the
quantification of the contribution of different factors to the final variability
following the method described in Deque el al. (2010) <doi:10.1007/s00382-011-1053-x>.
Multiple methods for pseudo-absence data generation can be applied, including the novel
Three-step method as described in Iturbide et al. (2015) <doi:10.1016/j.ecolmodel.2015.05.018>.
Additionally, a function for niche overlap calculation is provided, considering the metrics
described in Warren et al. (2008) <10.1111/j.1558-5646.2008.00482.x> and in
Pianka (1973) <10.1146/annurev.es.04.110173.000413>.
BugReports: https://github.com/SantanderMetGroup/mopa/issues
URL: https://github.com/SantanderMetGroup/mopa/wiki
License: file LICENSE
LazyLoad: true
RoxygenNote: 7.1.2
Maintainer: Maialen Iturbide <[email protected]>