diff --git a/R/as.MrEnsemble.R b/R/as.MrEnsemble.R index 19bfae3..cf00e70 100644 --- a/R/as.MrEnsemble.R +++ b/R/as.MrEnsemble.R @@ -37,7 +37,6 @@ #' #' @author M.D. Frias \email{mariadolores.frias@@unican.es}, J. Fernandez and Max Tuni #' -#' @family VisualizeR as.MrEnsemble <- function(obj.s3){ diff --git a/R/as.MrGrid.R b/R/as.MrGrid.R index 1261e05..e911f2e 100644 --- a/R/as.MrGrid.R +++ b/R/as.MrGrid.R @@ -37,7 +37,6 @@ #' #' @author M.D. Frias \email{mariadolores.frias@@unican.es}, J. Fernandez and Max Tuni #' -#' @family VisualizeR as.MrGrid <- function(obj.s3){ lons <- obj.s3$xyCoords$x diff --git a/R/as.MrStation.R b/R/as.MrStation.R index 6904f6f..9e124df 100644 --- a/R/as.MrStation.R +++ b/R/as.MrStation.R @@ -35,8 +35,7 @@ #' For gridded data sets with more than one ensemble member use as.MrEnsemble function. #' #' @author M.D. Frias \email{mariadolores.frias@@unican.es}, J. Fernandez and Max Tuni -#' -#' @family VisualizeR +#' as.MrStation <- function(obj.s3){ lons <- obj.s3$xyCoords[,1] diff --git a/R/bubblePlot.R b/R/bubblePlot.R index 11fd58d..d15c443 100644 --- a/R/bubblePlot.R +++ b/R/bubblePlot.R @@ -106,7 +106,7 @@ #' @author M.D. Frias \email{mariadolores.frias@@unican.es} and J. Fernandez based on the original diagram #' conceived by Slingsby et al (2009). #' -#' @family VisualizeR +#' @family visualization functions #' #' @references #' Jolliffe, I. T. and Stephenson, D. B. 2003. Forecast Verification: A Practitioner's Guide in Atmospheric diff --git a/R/reliabilityCategories.R b/R/reliabilityCategories.R index 20c0c2e..8147419 100644 --- a/R/reliabilityCategories.R +++ b/R/reliabilityCategories.R @@ -90,6 +90,9 @@ #' @importFrom sp SpatialPoints SpatialPolygons Polygons Polygon over #' @importFrom graphics plot.new abline polygon text grid title #' @import lattice +#' +#' @family visualization functions +#' #' @references Weisheimer, A., Palmer, T.N., 2014. On the reliability of seasonal climate forecasts. Journal of The Royal Society Interface 11, 20131162. doi:10.1098/rsif.2013.1162 diff --git a/R/spreadPlot.R b/R/spreadPlot.R index 10fd4b5..e0d5b8b 100644 --- a/R/spreadPlot.R +++ b/R/spreadPlot.R @@ -75,7 +75,7 @@ #' #' @author M.D. Frias \email{mariadolores.frias@@unican.es} and J. Fernandez #' -#' @family VisualizeR +#' @family visualization functions spreadPlot <- function(hindcast, forecast=NULL, year.target = NULL, detrend = FALSE, boxplot=TRUE, violin = FALSE, add.points=FALSE, pch=NULL) { # Check data dimension from the original data sets diff --git a/R/tercileBarplot.R b/R/tercileBarplot.R index 00a36df..3db53c7 100644 --- a/R/tercileBarplot.R +++ b/R/tercileBarplot.R @@ -76,7 +76,7 @@ #' @author M.D. Frias \email{mariadolores.frias@@unican.es} and J. Fernandez #' -#' @family VisualizeR +#' @family visualization functions #' #' @references #' Jolliffe, I. T. and Stephenson, D. B. 2003. Forecast Verification: A Practitioner's Guide in diff --git a/R/tercilePlot.R b/R/tercilePlot.R index c352cc2..2f155ea 100644 --- a/R/tercilePlot.R +++ b/R/tercilePlot.R @@ -83,7 +83,7 @@ #' @author M.D. Frias\email{mariadolores.frias@@unican.es} and J. Fernandez based on the original diagram #' conceived by A. Cofino (See Diez et al, 2011 for more details). #' -#' @family visualizeR +#' @family visualization functions #' #' @references #' Diez, E., Orfila, B., Frias, M.D., Fernandez, J., Cofino, A.S., Gutierrez, J.M., 2011. diff --git a/man/as.MrEnsemble.Rd b/man/as.MrEnsemble.Rd index 5e2e41b..a5aede0 100644 --- a/man/as.MrEnsemble.Rd +++ b/man/as.MrEnsemble.Rd @@ -25,12 +25,6 @@ The visualization functions are programmed to work with S4 class. This function For gridded data sets with just one ensemble member use as.MrGrid function. For station data use as.MrStation function. } -\seealso{ -Other VisualizeR: \code{\link{as.MrGrid}}, - \code{\link{as.MrStation}}, \code{\link{bubblePlot}}, - \code{\link{convertIntoS4}}, \code{\link{spreadPlot}}, - \code{\link{tercileBarplot}} -} \author{ M.D. Frias \email{mariadolores.frias@unican.es}, J. Fernandez and Max Tuni } diff --git a/man/as.MrGrid.Rd b/man/as.MrGrid.Rd index c38a54c..72599f7 100644 --- a/man/as.MrGrid.Rd +++ b/man/as.MrGrid.Rd @@ -25,12 +25,6 @@ The visualization functions are programmed to work with S4 class. This function For gridded data sets with more than one ensemble member use as.MrEnsemble function. For station data use as.MrStation function. } -\seealso{ -Other VisualizeR: \code{\link{as.MrEnsemble}}, - \code{\link{as.MrStation}}, \code{\link{bubblePlot}}, - \code{\link{convertIntoS4}}, \code{\link{spreadPlot}}, - \code{\link{tercileBarplot}} -} \author{ M.D. Frias \email{mariadolores.frias@unican.es}, J. Fernandez and Max Tuni } diff --git a/man/as.MrStation.Rd b/man/as.MrStation.Rd index e7cfbbd..e374b75 100644 --- a/man/as.MrStation.Rd +++ b/man/as.MrStation.Rd @@ -24,12 +24,6 @@ The visualization functions are programmed to work with S4 class. This function For gridded data sets with just one ensemble member use as.MrGrid function. For gridded data sets with more than one ensemble member use as.MrEnsemble function. } -\seealso{ -Other VisualizeR: \code{\link{as.MrEnsemble}}, - \code{\link{as.MrGrid}}, \code{\link{bubblePlot}}, - \code{\link{convertIntoS4}}, \code{\link{spreadPlot}}, - \code{\link{tercileBarplot}} -} \author{ M.D. Frias \email{mariadolores.frias@unican.es}, J. Fernandez and Max Tuni } diff --git a/man/bubblePlot.Rd b/man/bubblePlot.Rd index 9b42646..19e30f4 100644 --- a/man/bubblePlot.Rd +++ b/man/bubblePlot.Rd @@ -114,10 +114,9 @@ Jolliffe, I. T. and Stephenson, D. B. 2003. Forecast Verification: A Practitione Durham, UK, 1-3 April 2009. } \seealso{ -Other VisualizeR: \code{\link{as.MrEnsemble}}, - \code{\link{as.MrGrid}}, \code{\link{as.MrStation}}, - \code{\link{convertIntoS4}}, \code{\link{spreadPlot}}, - \code{\link{tercileBarplot}} +Other visualization functions: \code{\link{reliabilityCategories}}, + \code{\link{spreadPlot}}, \code{\link{tercileBarplot}}, + \code{\link{tercilePlot}} } \author{ M.D. Frias \email{mariadolores.frias@unican.es} and J. Fernandez based on the original diagram diff --git a/man/convertIntoS4.Rd b/man/convertIntoS4.Rd index e0d9c12..f1d9301 100644 --- a/man/convertIntoS4.Rd +++ b/man/convertIntoS4.Rd @@ -25,12 +25,6 @@ Most of the visualization functions are programmed to work with S4 class. This f For gridded data sets with just one ensemble member use as.MrGrid function. For station data use as.MrStation function. } -\seealso{ -Other VisualizeR: \code{\link{as.MrEnsemble}}, - \code{\link{as.MrGrid}}, \code{\link{as.MrStation}}, - \code{\link{bubblePlot}}, \code{\link{spreadPlot}}, - \code{\link{tercileBarplot}} -} \author{ M.D. Frias \email{mariadolores.frias@unican.es} and J. Fernandez } diff --git a/man/reliabilityCategories.Rd b/man/reliabilityCategories.Rd index eafd40e..e45053a 100644 --- a/man/reliabilityCategories.Rd +++ b/man/reliabilityCategories.Rd @@ -93,6 +93,11 @@ rel <- reliabilityCategories(obs = tas.ncep2, hindcast = tas.cfs2.int, \references{ Weisheimer, A., Palmer, T.N., 2014. On the reliability of seasonal climate forecasts. Journal of The Royal Society Interface 11, 20131162. doi:10.1098/rsif.2013.1162 } +\seealso{ +Other visualization functions: \code{\link{bubblePlot}}, + \code{\link{spreadPlot}}, \code{\link{tercileBarplot}}, + \code{\link{tercilePlot}} +} \author{ R. Manzanas \& M.Iturbide } diff --git a/man/spreadPlot.Rd b/man/spreadPlot.Rd index 9d9ddc3..5943342 100644 --- a/man/spreadPlot.Rd +++ b/man/spreadPlot.Rd @@ -67,10 +67,9 @@ spreadPlot(tas.cfs.dly.br, forecast = tas.cfs.operative.dly.br.2016, violin = TR } \seealso{ -Other VisualizeR: \code{\link{as.MrEnsemble}}, - \code{\link{as.MrGrid}}, \code{\link{as.MrStation}}, - \code{\link{bubblePlot}}, \code{\link{convertIntoS4}}, - \code{\link{tercileBarplot}} +Other visualization functions: \code{\link{bubblePlot}}, + \code{\link{reliabilityCategories}}, + \code{\link{tercileBarplot}}, \code{\link{tercilePlot}} } \author{ M.D. Frias \email{mariadolores.frias@unican.es} and J. Fernandez diff --git a/man/tercileBarplot.Rd b/man/tercileBarplot.Rd index cdfa872..a595153 100644 --- a/man/tercileBarplot.Rd +++ b/man/tercileBarplot.Rd @@ -72,10 +72,9 @@ Jolliffe, I. T. and Stephenson, D. B. 2003. Forecast Verification: A Practitione Atmospheri Science, Wiley, NY } \seealso{ -Other VisualizeR: \code{\link{as.MrEnsemble}}, - \code{\link{as.MrGrid}}, \code{\link{as.MrStation}}, - \code{\link{bubblePlot}}, \code{\link{convertIntoS4}}, - \code{\link{spreadPlot}} +Other visualization functions: \code{\link{bubblePlot}}, + \code{\link{reliabilityCategories}}, + \code{\link{spreadPlot}}, \code{\link{tercilePlot}} } \author{ M.D. Frias \email{mariadolores.frias@unican.es} and J. Fernandez diff --git a/man/tercilePlot.Rd b/man/tercilePlot.Rd index d56b2df..ca9607b 100644 --- a/man/tercilePlot.Rd +++ b/man/tercilePlot.Rd @@ -80,6 +80,11 @@ Tellus A 63, 757-762. doi:10.1111/j.1600-0870.2011.00523.x Jolliffe, I. T. and Stephenson, D. B. 2003. Forecast Verification: A Practitioner's Guide in Atmospheri Science, Wiley, NY } +\seealso{ +Other visualization functions: \code{\link{bubblePlot}}, + \code{\link{reliabilityCategories}}, + \code{\link{spreadPlot}}, \code{\link{tercileBarplot}} +} \author{ M.D. Frias\email{mariadolores.frias@unican.es} and J. Fernandez based on the original diagram conceived by A. Cofino (See Diez et al, 2011 for more details).