diff --git a/tests/nanopore/test_ONT_run_classes.py b/tests/nanopore/test_ONT_run_classes.py index bbcb3ad2..fe4ad19b 100644 --- a/tests/nanopore/test_ONT_run_classes.py +++ b/tests/nanopore/test_ONT_run_classes.py @@ -31,7 +31,7 @@ def make_ONT_test_config(tmp: tempfile.TemporaryDirectory) -> dict: metadata_dir: {tmp.name}/ngi-nas-ns/promethion_data destination: {tmp.name}/miarka/promethion/ minion: - transfer_log: /{tmp.name}/log/transfer_minion.tsv + transfer_log: {tmp.name}/log/transfer_minion.tsv archive_dir: {tmp.name}/sequencing/minion/nosync metadata_dir: {tmp.name}/ngi-nas-ns/minion_data destination: {tmp.name}/miarka/minion/ @@ -186,7 +186,7 @@ def create_ONT_run_dir( with open(f"{run_path}/.anglerfish_ongoing", "w") as f: f.write("1337") - if anglerfish_exit: + if anglerfish_exit is not None: with open(f"{run_path}/.anglerfish_done", "w") as f: f.write(str(anglerfish_exit))