diff --git a/VERSIONLOG.md b/VERSIONLOG.md index 507fcd47..df87d274 100644 --- a/VERSIONLOG.md +++ b/VERSIONLOG.md @@ -1,5 +1,10 @@ # Scilifelab_epps Version Log + +## 20240910.3 + +Add logbook for PromethION and MinION. + ## 20240910.2 Support both single lane and dual lane of AVITI flowcell diff --git a/data/logbook_data.py b/data/logbook_data.py index 6b563e99..7398fa8c 100644 --- a/data/logbook_data.py +++ b/data/logbook_data.py @@ -351,6 +351,15 @@ "details": ["Processname"], }, }, + "ONT Start Sequencing v3.0": { + "lims_instrument": { + "dest_file": "MinION-PromethION", + "details": [ + "Processname", + "LIMS ID (Process)", + ], + }, + }, "ONT QC Adapter Ligation v1.2": { "lims_instrument": { "dest_file": "Qubit", @@ -369,6 +378,15 @@ "details": ["Assay", "Lot no: Qubit kit"], }, }, + "ONT QC Start Sequencing": { + "lims_instrument": { + "dest_file": "MinION-PromethION", + "details": [ + "Processname", + "LIMS ID (Process)", + ], + }, + }, "PCR1 (Amplicon)": { "lims_instrument": {"dest_file": "Bravo", "details": ["Processname"]}, "udf_PCR machine": {"dest_file": "PCR"}, @@ -556,4 +574,5 @@ "Speedvac": {"File": "1Dk7qPJeNmzKtHWEdNkZ4yLB0FycjREqqIhNhInZ8G9g"}, "Tecan": {"File": "1DUBEL8DBf0lnXJjIIjowQf2PrftMo9ECXpeNrDodM4s"}, "VC100": {"File": "1FEH2Ilyaz2FThJZ_jjlDna7s4aTuRgfxvLFpYgOPHBw"}, + "MinION-PromethION": {"File": "1OazL3MNZImTJBHK-QVy-jbxL9nN1uCoOmOMSiXclRac"}, } diff --git a/scripts/logbook_service_account.py b/scripts/logbook_service_account.py index 8dce36d5..bcfe308b 100644 --- a/scripts/logbook_service_account.py +++ b/scripts/logbook_service_account.py @@ -24,7 +24,7 @@ SCOPES = ["https://www.googleapis.com/auth/spreadsheets"] SERVICE_ACCOUNT_FILE = "/opt/gls/clarity/users/glsai/.credentials/ngi-lims-epp-001.json" -# In coordinates, the values correspond to LineID of the header, columns for date, operator, instrument name and details. The sheet name shoud be "Logbook" +# In coordinates, the values correspond to LineID of the header, columns for date, operator, instrument name and details. The sheet name should be "Logbook" LOGBOOK_COORDINATES = [22, "B", "C", "D", "E"]