v12.3.0

Catalyst v12.3.0

Diff since v12.2.1

Closed issues:

• Example from tutorial not working from documentation (#552)
• Non-integer reaction coefficients for sub/prod/netstoichmat (#553)

Merged pull requests:

• doc cov (#548) (@ArnoStrouwen)
• MassInstallAction: Install the Invalidations workflow on this repository (#549) (@devmotion)
• Update api funcs (#554) (@isaacsas)

v12.2.1

Catalyst v12.2.1

Diff since v12.2.0

Closed issues:

• Namespacing not working with parametric stoichiometry (#545)

Merged pull requests:

• add new network tests (#544) (@isaacsas)
• Parametric composition bug (#546) (@isaacsas)

v12.2.0

Catalyst v12.2.0

Diff since v12.1.4

Closed issues:

• update BifurcationKit tutorial to latest version (#536)

Merged pull requests:

• Update bifurcation_diagram.md (#538) (@pitmonticone)
• Update with BifurcationKit (#539) (@TorkelE)
• adding bibtex for bioarxiv paper of Catalyst.jl (#540) (@yewalenikhil65)
• Homotopy continuation tutorial (#541) (@TorkelE)
• vars to idxs in docs (#542) (@isaacsas)

v12.1.4

Catalyst v12.1.4

Diff since v12.1.3

Closed issues:

• Bug in classification of VariableRateJumps (#528)

Merged pull requests:

• use dependency graph to classify VariableRateJumps (#535) (@isaacsas)

v12.1.3

Catalyst v12.1.3

Diff since v12.1.2

Closed issues:

• add propertynames to match getvars (#533)

Merged pull requests:

• Fix symbol to variable mappings (#534) (@isaacsas)

v12.1.2

Catalyst v12.1.2

Diff since v12.1.1

Merged pull requests:

• faq on symbolic indexing (#531) (@isaacsas)

v12.1.1

Catalyst v12.1.1

Diff since v12.1.0

Merged pull requests:

• fix formatting (#530) (@isaacsas)

v12.1.0

Catalyst v12.1.0

Diff since v12.0.0

Closed issues:

• structural_simplify complains about extra variables when using metadata (isbc or constant) (#518)
• Handle constant species in API functions (#521)

Merged pull requests:

• format SciML Style (#527) (@ChrisRackauckas)
• Rename DiffEqJump to JumpProcesses (#529) (@isaacsas)

v12.0.0

Catalyst v12.0.0

Diff since v11.0.2

Merged pull requests:

• Constant species as parameters (#522) (@isaacsas)
• update API for constant species (#523) (@isaacsas)

v11.0.2

Catalyst v11.0.2

Diff since v11.0.1

Merged pull requests:

• Tutorial for Network Representation using complexes-based representation (#503) (@yewalenikhil65)
• fix graphs (#519) (@isaacsas)
• Handle constraint params (#520) (@isaacsas)