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How best to integrate results from multiple marker genes #23

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lauramason326 opened this issue Sep 6, 2022 · 0 comments
Open

How best to integrate results from multiple marker genes #23

lauramason326 opened this issue Sep 6, 2022 · 0 comments

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@lauramason326
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Hello
I am reaching out for some advice on using lefse with multiple marker genes for the same set of samples. Should I concatenate all the otu tables and then run lefse or run lefse on each marker gene's otu table separately and then combine the results?
Thanks!
Laura
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@lauramason326