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How to use LDA when the number of samples is smaller than the number of features? #33

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Five296 opened this issue Dec 25, 2023 · 0 comments

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@Five296
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Five296 commented Dec 25, 2023

Hello, I currently have a confusion. When conducting differential analysis of bacteria, I often face the challenge of having a limited number of samples (only around twenty) and an excessive number of annotated species, making it difficult to decide which method to use. In my understanding, LDA may require a large number of samples, greater than the number of annotated species, for optimal use. If my sample size is small, can tools like yours still be used?

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