DESCRIPTION

Package: ADViSELipidomics
Title: Shinyapp for the acquisition and the analysis of lipidomics data
Version: 1.3.0
Authors@R: c(
    person("Eugenio", "Del Prete", , "e.delprete@na.iac.cnr.it", role = "aut",
           comment = c(ORCID = "0000-0003-3214-9021")),
    person("Fabio", "Della Rocca", , "fabiodellarocca94@gmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0002-8003-2648")),
    person("Ana Margarida", "Campos", , "campos.anamargarida@gmail.com", role = c("ctb", "dtc"),
           comment = c(ORCID = "0000-0002-8832-7686")),
    person("Carmela", "Gallo", , "carmen.gallo@icb.cnr.it", role = "dtc",
           comment = c(ORCID = "0000-0002-1665-2615")),
    person("Genoveffa", "Nuzzo", , "nuzzo.genoveffa@icb.cnr.it", role = c("ctb", "dtc"),
           comment = c(ORCID = "0000-0001-7065-2379")),
    person("Angelo", "Fontana", , "afontana@icb.cnr.it", role = c("dtc", "fnd"),
           comment = c(ORCID = "0000-0002-5453-461X")),
    person("Claudia", "Angelini", , "claudia.angelini@cnr.it", role = c("ctb", "fnd"),
           comment = c(ORCID = "0000-0001-8350-8464"))
  )
Description: ADViSELipidomics is suitable for the acquisition of
    LipidSearch and LIQUID files, the computation of the recovery
    percentages, the creation of the feature matrix (lipid species
    concentration) and the statistical analysis of the feature matrix.
License: MIT + file LICENSE
URL: https://github.com/ShinyFabio/ADViSELipidomics
BugReports: https://github.com/ShinyFabio/ADViSELipidomics/issues
Depends:
    shiny (>= 1.6.0),
    shinyBS,
    shinydashboard,
    shinyWidgets
Imports: 
    bsplus,
    cicerone,
    circlize,
    cluster,
    ComplexHeatmap,
    config (>= 0.3.1),
    crayon,
    dashboardthemes,
    data.table,
    DataEditR,
    dendextend,
    dplyr,
    DT,
    factoextra,
    fgsea,
    fmsb,
    forcats,
    fs,
    ggfortify,
    ggplot2,
    ggpubr,
    ggrepel,
    ggVennDiagram,
    golem (>= 0.3.1),
    graphics,
    grDevices,
    grid,
    gridExtra,
    InteractiveComplexHeatmap,
    knitr,
    limma,
    lubridate,
    MASS,
    metabolomicsWorkbenchR,
    miniUI,
    mixOmics,
    openxlsx,
    plotly,
    purrr,
    RColorBrewer,
    readr,
    reshape2,
    S4Vectors,
    scales,
    shinycssloaders,
    shinyFiles,
    shinyjs,
    statmod,
    stats,
    stringr,
    SummarizedExperiment,
    sva,
    tibble,
    tidyr,
    tools,
    utils,
    VIM
biocViews:SummarizedExperiment, limma, sva, fgsea, mixOmics,
    metabolomicsWorkbenchR, ComplexHeatmap, InteractiveComplexHeatmap
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3