Version 0.16.1 release

Fixed

• Missing depiction_object_type on New image task #1995
• Sort case-insensitive #1985

Version 0.16.0 release

Added

• New collecting event task #1530
• "Quick" collection objects options from new collecting event task
• New WKT georeference inputs
• Auto-georeference and date Collecting Events by depicting images with pertinent EXIF data
• Route linting specs
• Generate label (alpha), pastes values into print label input
• Collecting event navigation options (next/previous with/out
• Nested_attributes for Labels
• Collection object/and collecting event navigation options/bridges
• /collecting_events/preview?<filter_params> a preview look for brief tables
• Subclasses for labels:Label::QrCode, Label::Code128
• Include rqrcode, barby for barcode rendering
• Add label attribute to Label JSON response that renders QR code
• Add accommodation for printing pages of barcode-based labels
• Add Georeference::Wkt an anonymous WKT based georeference assertion
• Add option to disable name-casing when Person is created from /people/new #1967
• Full CASTOR (taxon names batch load) example template, CASTOR preview notices
• New ICZN class added: NoDiagnosisAfter1930AndRejectedBefore2000 for family-group names
• Add image attributions, original citation and editor options in image viewer #1978
• Browse current OTU button in Browse OTU

Changed

• Moved buttons in collecting event on comprehensive task #1986
• Improved collecting event status in smart selector on comprehensive digitization
• Some tasks route names were "malformed" and renamed
• ENV variableTAXONWORKS_TEST_LINTING=true must now be true, not anything, to trigger linting specs
• Setting Identifier#cached uses a build getter to enable Label building
• Georeference validation requires CollectingEvent (enabled by proper use of :inverse_of)
• Tweak to how pinned? is calculated trying to eliminate database calls
• Minor cleanup of batch preview layouts
• Changed softvalidation message for names being on Official ICZN lists
• Fetch codecov, seedback and closure_tree gems from RubyGems.
• Updated gems (bundle update without altering Gemfile).
• Remove no_leaves= true from taxon name on filter images task #1953
• Turn off autocomplete feature on vue autocomplete #1956
• Limited CoLDP exports runtime to 1 hour and 2 attemps.
• Turn off autocomplete on new taxon name task
• Replaced display name attribute for object_label in parent autocomplete on New taxon name task
• Filter task by name only [#1962]
• Search geographic area by verbatim coordinates on new collecting event
• Show coordinates from verbatim georeference
• Parsed verbatim label to fields
• Parsed EXIF coordinates to verbatim fields
• Changed autocomplete label #1988
• Using newer biodiversity gem from official source
• Updated gems (bundle update without altering Gemfile)

Fixed

• Loan items reference proper housekeeping in table
• Line links of batch-preview results
• broken API download link for exported references #1908
• removed BASIS task stub #1716
• /api/v1/notes project scoping #1958
• is_community? reporting false for some models without project_id
• New source after cloning not display changes on authors / editors lists
• Edit taxon name firing multiple updates when updating gender #1970
• Correct image size on image viewer
• Save pages before clone person on new taxon name #1977
• Correct count display of attributions #1979
• Uncheck collecting event option #1980
• Trip Code/Identifier not visible in header of Edit collecting event #1990

Version 0.15.1 release

Added

• Show buffered values in Task - Browse collection objects #1931
• Default pin button on Uniquify people task
• Checkbox to Select/unselect all match people on Uniquify people task #1921
• Pixels to centimeter on new image task

Changed

• Clean timeline display in Task - Browse collection objects
• db:seed displays password for created users and adds admin to Default project #1913
• Start date needs to be set before set end date on Housekeeping facet
• Bump node package ini from 1.3.5 to 1.3.7

Fixed

• CVT smart selectors/pinboard scope broken #1940 #1941
• Image filter ancestor_id was to be taxon_name_id or taxon_name_id[] #1916
• Bad Image select_option sort #1930
• Housekeeping filter params now less restrictive #1920 PENDING UI TEST
• ShallowPolymorphic called in .json form #1928
• Documentation of param names, examples, for the "CASTOR" taxon name batch load #1926
• tw:db:load task not handling settings reliably. #1914
• Set pulse attribute true on radial annotator for object with annotations on data views and Browse nomenclature task
• Invalid attribute :note in Note API result view.
• Malformed PDF exception handling in Document model.
• Clipboard copy shortcut
• Source hub link on Citations by source task
• Clean content editor after change a topic

Version 0.15.0 release

Added

• Export project database task #1868
• Additional collecting methods recognized from the collecting event label
• Added content filter, API endpoints #1905
• New greatly simplified controller concern ShallowPolymorphic for handling link b/w shallow routes and filters
• Note filter improvements, specs, new params, API exposure [#XXX]
• person#sources has_many (very slight potential for issues)
• Multiple new people filter params, see lib/queries/person/filter.rb #1859
• People can be Tagged
• Added image filter #1454
• Added image smart selector #1832
• Added pixels_to_centimeter to images #1785
• PENDING TEST - API - sort (with classification, alphabetical options) to /taxon_names #1865
• Taxon determination, citations and collecting event information in specimen record on browse OTU
• Serial facet on filter sources
• Pulse animation for radial annotator #1822
• OTU column in asserted distribution on Browse OTU #1846
• Radial annotator on Uniquify people task
• History title on Browse nomenclature
• otu_ids param on Image matrix task
• Open image matrix button on Interactive keys task
• Citations on image response
• View mode on image matrix
• Lock view option for smart selector
• Sortable option to lock column/rows on edit/new observation matrix task #1895
• Media Descriptor support on Matrix Row Coder #1896
• Free Text Descriptor support on Matrix Row Coder #1896
• Search source on New source task #1899
• Link to Browse OTU on New asserted distribution task #1893
• Link to Browse OTU on comprehensive specimen digitization #1889

Fixed

• Potential issue (may be others) with CoLDP raising in the midst of large exports
• People filter role + name #1662
• Fix family synonym validation [#1892]
• Fix matrix view row order #1881
• CVT view helper bug with predicates
• Fixed database seeding bugs.
• Fixed display problem of OTUs without taxon name on Browse OTU
• Edit asserted distribution on quick forms
• Reference overflow on Browse nomenclature
• Date requested filled automatically #1872
• Remove collecting event on comprehensive specimen digitization [#1878]
• Loan smart selector DB query.
• Label overlap on menu on observation matrices view #1894
• Remove repository on comprehensive specimen digitization #1897

Changed

• change the order of TaxonName softvalidation to bring the duplicate message on the top
• tweaked CoLDP reified id concept and use
• removed most_recent_upates from Content params
• removed /contents/filter.json endpoint, use /contents.json
• Deprecating Concerns::Polymorphic for ShallowPolymorphic, in progress, see Notes controller
• Note filter params query_string => text, note_object_types[] => note_object_type[], note_object_ids[] => note_object_id[], added corresponding non-array versions
• Moved levenshtein_distance to Query for general use
• Remove people/123/similar endpoint (used /index)
• Person filter person_wildcards is person_wildcard
• Person filter behaviour vs. levenshtein_cuttof
• cached_valid_taxon_name_id updated for combination after valid status is assigned.
• updated soft validation for 'Uncertain placement'
• [sic] changed to (sic) for misspelled bacterial names
• Additional date and geographical coordinate formats added to the Verbatim label RegEx parsers
• Observation matrix could be resolved without observation_matrix_id, only with otu_filter
• Running rake db:seed without user_id/project_id is now possible.
• Disabled hamburger menu when no functionality behind it on Browse OTU #1737
• No longer needed set user on User facet in filters
• Autocomplete label for original combination on New taxon name task
• Changed "n/a" to combination label on Browse nomenclature
• Create original citation in image matrix task
• Autocomplete list style
• Edit button color on type material species task #1898
• GitHub Actions used as main CI/CD provider
• Updated vulnerable node packages #1912

Version 0.14.1 release

Added

• API - type to /roles/:id
• API - year to /taxon_names
• API - include_roles param to /people
• API - taxon_name_author_ids[]=, taxon_name_author_ids_or params to /taxon_names
• API - collector_ids[]=, collector_ids_or params to /collecting_events
• Shape on asserted distribution list #1828
• Row filter on Interactive keys task
• Interactive keys and image matrix buttons on observation matrix dashboard

Fixed

• Wrong param attribute in topic smart selector on radial annotator #1829
• Show repository on Browse OTU
• Enable search after fill collecting event fields #1833
• Missing geo_json param on geographic_area request #1840

Changed

• Exclude Roles from response from /api/v1/people by default
• Increased max_per_page to 10000
• Random words clashes mitigation: Project factory names made longer and Faker unique generator is reset only between specs instead of before each test.
• Removed pages field on topic section
• Improved verbatim date parsing
• Georeference scope over geographic area scope #1841

Version 0.14.0 release

Added

• Collecting Event API endpoints
• Collection Object API endpoints
• Biological Assertion API endpoints
• Asserted Distribution API endpoints
• New Otu API params
• People filter API endpoints #1509
• Identifier filter API endpoints #1510
• Source filter API endpoints #1511
• New Interactive Key task #1810
• New model for matrix based interactive keys which produce JSON for the Interactive Key task #1810
• weight field to descriptor
• Ancestors facet on filter nomenclature #1791
• TW_DISABLE_DB_BACKUP_AT_DEPLOY_TIME env var to disable built-in backup functionality at deploy/database-update time.
• Display coordinate type specimens #1811
• Changed background color header for invalid names on Browse OTU
• Taxonworks version in header bar when not running in sandbox mode

Fixed

• Fixed radial navigator broken for some data #1824
• Fixed IsData position #1805
• Collecting event object radial metadata settings
• Webpack resolved_paths deprecation warning
• Missing /otus/:otu_id/taxon_determinations route
• tw:db:restore task not picking up database host settings
• Create citation on new combination without pages
• Param descriptor id on new descriptor task #1798
• Filter by user on filter nomenclature #1780
• Optimized selector queries for Loan model

Changed

• Fix original author string for Plant names
• Additional date format added for date recognition RegEx
• Removed some attributes from api/v1 endpoints to simplify responses
• type_materials/:id.json includes original_combination string
• CoLDP references are full cached values, not partially passed
• Combination nomenclatural code inference drawn from members, not parent
• Some nomenclature rank related simbols moved to constants
• Load Images for coordinate OTUs #1787
• Extended New Image task upload timeout from 30 seconds to 10 minutes
• Updated rgeo-proj4 gem

Version 0.13.0 release

Added

• Browse OTU page unifies coordinate OTUs for Asserted Distribution and Biological Associations #1570
• Handling for new unicode minutes, seconds symbols #1526
• Descriptor object radial paths
• Many specs related to dynamic observation matrix items
• Improvements to Descriptor autocomplete labels #1727
• Added rake tw:maintenance:otus:missplaced_references #1439
• Pdf viewer button on Documentation and Source views #1693
• Spinner for when converting verbatim to bibtex #1710
• Set OTU in determination when otu_id param is present on comprehensive task
• "Create georeference from verbatim" button in Parsed column on comprehensive task
• Sortable order for Type material, Biological association and Determinations on comprehensive task
• User facet on Filter nomenclature task #1720
• Pagination on Filter noemnclature task #1724
• Biological associations filter on Browse OTU

Changed

• AssertedDistribution filter otu_id and geographic_area_id can now also take array form, e.g. otu_id[]=
• Preload all CSL styles via fixed constant, increasing boot speed #1749
• Return value format for Utilities::Geo.distance_in_meters changed from [Float] to [String]
• Data migration updating all type column values for matrix row/column items
• Tweaked JSON attribute response for matrix rows and columns very slightly
• Updated observation item types to properly nest them, inc. all downstream changes (Factories, etc.)
• Unfied matrix hooks in various places
• Updated some matrix related routes to point to tasks
• Updated respec matrix tag to observation_matrix
• Methods that write to cached should not fire callbacks, potential for #1701
• Using custom geckodriver-helper for Firefox 80 support
• Override browser shortcuts on task hotkeys #1738
• Biological associations section on Browse OTU
• TW now supports Postgres 12 #1305
• Replaced biodiversity with custom gem repo using IPC with gnparser processes
• Updated gems
• Character "΄" also accepted as minute specifier in coordinates parsing.

Fixed

• Fixed LOW_PROBABILITY constant message
• Matrix rows/items prevent OTU (and collection object) from being destroyed #1159
• Scope of dynamic taxon name row item #1747
• Processing of values (in distance_in_meters) to limit significant digits of results of unit conversions. Decimal degrees not affected at this time. #1512
• Character state order not correct in Nexus format #1574
• Not able to destroy matrix rows or matrices #1520, #1123
• Dynamic observeratoin matrix items not properly scoped/behaving #1125
• Destroy pdf pages before create new ones #1680
• Serial multiple updates did not update bibtex author field #1709
• Fix (likely) for pinboard items failing to remove #1690
• Better response for failed collecting event cloning #1705
• Cleaned up deprecated biological associations graph autcomplete #1707
• Colliding namespace method for identifiers breaks identifiers list #1702
• Graceful failed serial destroy response #1703
• Restored Show -> edit link #1699
• Enable search button after pick a collecting event date on Filter collection objects task [#1728]
• Misppeling collecting_event_ids parameter [#1729]
• Non-original combination authorship lacking parentheses #1686

Version 0.12.17 release

Added

• Successfull source destroy message
• Pending - Definition field to BiologicalRelationship model and views #1672
• New button to (attempt to) convert verbatim sources to Bibtex via Crossref
• Model methods and attribute to change Source Verbatim to Bibtex #1673
• DOMPurify package to sanitize html
• List all Keyword and Topics in smart selector on filter source #1675
• Added data links tool in markdown editor (Ctrl/Alt-Shift-L) #1674
• Definition field on composer biological relationship task #1672

Changed

• Unified can_destroy/edit methods
• Improved Source autocomplete with metadata/markup #1681
• Changed CoLDP download to use Catalog::Nomenclature as name source
• Replace SimpleMDE for EasyMDE
• Sort alphabetically bibliography style list on filter source
• Removed limit of download bibtex on filter source #1683
• Disable/enable destroy button from metadata on radial navigator #1696

Fixed

• Non admins not able to destroy shared data #1098
• Pending confirmation: Include original combinations in CoLDP #1204
• Pending confirmation: Include forma/variety properly in CoLDP #1203
• Docker: Fixed path typo on clean up command
• Tag button on filter source #1692
• Overflow in taxon names list in new taxon name #1688
• Confidence button overlapped in new combination #1687

Version 0.12.16 release

Added

• Highlight metadata that is not in this project in uniquify people task #1648
• Locks buttons on grid digitizer task #1599
• Option to export styled bibliography on filter sources task #1652
• Edit button in content section on radial object #1670

Changed

• Drag button style on new taxon name #1669
• Removed SimpleMDE lib from ruby assets and added to npm dependencies
• Allow taxon name type relationships to be cited #1667

Fixed

• BibTex html no longer escaped #1657
• Some of the elements of the form are not accessible on overflow. #1661
• Populate masculine, feminine and neuter on gender form #1665
• Markdown render on Browse OTU #1671

Version 0.12.15 release

Fixed

• Sqed hook initiated with String, not Class #1654