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cfileio.c
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cfileio.c
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/* This file, cfileio.c, contains the low-level file access routines. */
/* The FITSIO software was written by William Pence at the High Energy */
/* Astrophysic Science Archive Research Center (HEASARC) at the NASA */
/* Goddard Space Flight Center. */
#include <string.h>
#include <stdlib.h>
#include <math.h>
#include <ctype.h>
#include <errno.h>
#include <stddef.h> /* apparently needed to define size_t */
#include "fitsio2.h"
#include "group.h"
#ifdef CFITSIO_HAVE_CURL
#include <curl/curl.h>
#endif
#define MAX_PREFIX_LEN 20 /* max length of file type prefix (e.g. 'http://') */
#define MAX_DRIVERS 31 /* max number of file I/O drivers */
typedef struct /* structure containing pointers to I/O driver functions */
{ char prefix[MAX_PREFIX_LEN];
int (*init)(void);
int (*shutdown)(void);
int (*setoptions)(int option);
int (*getoptions)(int *options);
int (*getversion)(int *version);
int (*checkfile)(char *urltype, char *infile, char *outfile);
int (*open)(char *filename, int rwmode, int *driverhandle);
int (*create)(char *filename, int *drivehandle);
int (*truncate)(int drivehandle, LONGLONG size);
int (*close)(int drivehandle);
int (*remove)(char *filename);
int (*size)(int drivehandle, LONGLONG *size);
int (*flush)(int drivehandle);
int (*seek)(int drivehandle, LONGLONG offset);
int (*read)(int drivehandle, void *buffer, long nbytes);
int (*write)(int drivehandle, void *buffer, long nbytes);
} fitsdriver;
fitsdriver driverTable[MAX_DRIVERS]; /* allocate driver tables */
FITSfile *FptrTable[NMAXFILES]; /* this table of Fptr pointers is */
/* used by fits_already_open */
int need_to_initialize = 1; /* true if CFITSIO has not been initialized */
int no_of_drivers = 0; /* number of currently defined I/O drivers */
static int pixel_filter_helper(fitsfile **fptr, char *outfile,
char *expr, int *status);
static int find_quote(char **string);
static int find_doublequote(char **string);
static int find_paren(char **string);
static int find_bracket(char **string);
static int find_curlybracket(char **string);
static int standardize_path(char *fullpath, int *status);
int comma2semicolon(char *string);
#ifdef _REENTRANT
pthread_mutex_t Fitsio_InitLock = PTHREAD_MUTEX_INITIALIZER;
#endif
/*--------------------------------------------------------------------------*/
int fitsio_init_lock(void)
{
int status = 0;
#ifdef _REENTRANT
static int need_to_init = 1;
pthread_mutexattr_t mutex_init;
FFLOCK1(Fitsio_InitLock);
if (need_to_init) {
/* Init the main fitsio lock here since we need a a recursive lock */
status = pthread_mutexattr_init(&mutex_init);
if (status) {
ffpmsg("pthread_mutexattr_init failed (fitsio_init_lock)");
return(status);
}
#ifdef __GLIBC__
status = pthread_mutexattr_settype(&mutex_init,
PTHREAD_MUTEX_RECURSIVE_NP);
#else
status = pthread_mutexattr_settype(&mutex_init,
PTHREAD_MUTEX_RECURSIVE);
#endif
if (status) {
ffpmsg("pthread_mutexattr_settype failed (fitsio_init_lock)");
return(status);
}
status = pthread_mutex_init(&Fitsio_Lock,&mutex_init);
if (status) {
ffpmsg("pthread_mutex_init failed (fitsio_init_lock)");
return(status);
}
need_to_init = 0;
}
FFUNLOCK1(Fitsio_InitLock);
#endif
return(status);
}
/*--------------------------------------------------------------------------*/
int ffomem(fitsfile **fptr, /* O - FITS file pointer */
const char *name, /* I - name of file to open */
int mode, /* I - 0 = open readonly; 1 = read/write */
void **buffptr, /* I - address of memory pointer */
size_t *buffsize, /* I - size of buffer, in bytes */
size_t deltasize, /* I - increment for future realloc's */
void *(*mem_realloc)(void *p, size_t newsize), /* function */
int *status) /* IO - error status */
/*
Open an existing FITS file in core memory. This is a specialized version
of ffopen.
*/
{
int ii, driver, handle, hdutyp, slen, movetotype, extvers, extnum;
char extname[FLEN_VALUE];
LONGLONG filesize;
char urltype[MAX_PREFIX_LEN], infile[FLEN_FILENAME], outfile[FLEN_FILENAME];
char extspec[FLEN_FILENAME], rowfilter[FLEN_FILENAME];
char binspec[FLEN_FILENAME], colspec[FLEN_FILENAME];
char imagecolname[FLEN_VALUE], rowexpress[FLEN_FILENAME];
char *url, errmsg[FLEN_ERRMSG];
char *hdtype[3] = {"IMAGE", "TABLE", "BINTABLE"};
if (*status > 0)
return(*status);
*fptr = 0; /* initialize null file pointer */
if (need_to_initialize) /* this is called only once */
{
*status = fits_init_cfitsio();
if (*status > 0)
return(*status);
}
url = (char *) name;
while (*url == ' ') /* ignore leading spaces in the file spec */
url++;
/* parse the input file specification */
fits_parse_input_url(url, urltype, infile, outfile, extspec,
rowfilter, binspec, colspec, status);
strcpy(urltype, "memkeep://"); /* URL type for pre-existing memory file */
*status = urltype2driver(urltype, &driver);
if (*status > 0)
{
ffpmsg("could not find driver for pre-existing memory file: (ffomem)");
return(*status);
}
/* call driver routine to open the memory file */
FFLOCK; /* lock this while searching for vacant handle */
*status = mem_openmem( buffptr, buffsize,deltasize,
mem_realloc, &handle);
FFUNLOCK;
if (*status > 0)
{
ffpmsg("failed to open pre-existing memory file: (ffomem)");
return(*status);
}
/* get initial file size */
*status = (*driverTable[driver].size)(handle, &filesize);
if (*status > 0)
{
(*driverTable[driver].close)(handle); /* close the file */
ffpmsg("failed get the size of the memory file: (ffomem)");
return(*status);
}
/* allocate fitsfile structure and initialize = 0 */
*fptr = (fitsfile *) calloc(1, sizeof(fitsfile));
if (!(*fptr))
{
(*driverTable[driver].close)(handle); /* close the file */
ffpmsg("failed to allocate structure for following file: (ffomem)");
ffpmsg(url);
return(*status = MEMORY_ALLOCATION);
}
/* allocate FITSfile structure and initialize = 0 */
(*fptr)->Fptr = (FITSfile *) calloc(1, sizeof(FITSfile));
if (!((*fptr)->Fptr))
{
(*driverTable[driver].close)(handle); /* close the file */
ffpmsg("failed to allocate structure for following file: (ffomem)");
ffpmsg(url);
free(*fptr);
*fptr = 0;
return(*status = MEMORY_ALLOCATION);
}
slen = strlen(url) + 1;
slen = maxvalue(slen, 32); /* reserve at least 32 chars */
((*fptr)->Fptr)->filename = (char *) malloc(slen); /* mem for file name */
if ( !(((*fptr)->Fptr)->filename) )
{
(*driverTable[driver].close)(handle); /* close the file */
ffpmsg("failed to allocate memory for filename: (ffomem)");
ffpmsg(url);
free((*fptr)->Fptr);
free(*fptr);
*fptr = 0; /* return null file pointer */
return(*status = MEMORY_ALLOCATION);
}
/* mem for headstart array */
((*fptr)->Fptr)->headstart = (LONGLONG *) calloc(1001, sizeof(LONGLONG));
if ( !(((*fptr)->Fptr)->headstart) )
{
(*driverTable[driver].close)(handle); /* close the file */
ffpmsg("failed to allocate memory for headstart array: (ffomem)");
ffpmsg(url);
free( ((*fptr)->Fptr)->filename);
free((*fptr)->Fptr);
free(*fptr);
*fptr = 0; /* return null file pointer */
return(*status = MEMORY_ALLOCATION);
}
/* mem for file I/O buffers */
((*fptr)->Fptr)->iobuffer = (char *) calloc(NIOBUF, IOBUFLEN);
if ( !(((*fptr)->Fptr)->iobuffer) )
{
(*driverTable[driver].close)(handle); /* close the file */
ffpmsg("failed to allocate memory for iobuffer array: (ffomem)");
ffpmsg(url);
free( ((*fptr)->Fptr)->headstart); /* free memory for headstart array */
free( ((*fptr)->Fptr)->filename);
free((*fptr)->Fptr);
free(*fptr);
*fptr = 0; /* return null file pointer */
return(*status = MEMORY_ALLOCATION);
}
/* initialize the ageindex array (relative age of the I/O buffers) */
/* and initialize the bufrecnum array as being empty */
for (ii = 0; ii < NIOBUF; ii++) {
((*fptr)->Fptr)->ageindex[ii] = ii;
((*fptr)->Fptr)->bufrecnum[ii] = -1;
}
/* store the parameters describing the file */
((*fptr)->Fptr)->MAXHDU = 1000; /* initial size of headstart */
((*fptr)->Fptr)->filehandle = handle; /* file handle */
((*fptr)->Fptr)->driver = driver; /* driver number */
strcpy(((*fptr)->Fptr)->filename, url); /* full input filename */
((*fptr)->Fptr)->filesize = filesize; /* physical file size */
((*fptr)->Fptr)->logfilesize = filesize; /* logical file size */
((*fptr)->Fptr)->writemode = mode; /* read-write mode */
((*fptr)->Fptr)->datastart = DATA_UNDEFINED; /* unknown start of data */
((*fptr)->Fptr)->curbuf = -1; /* undefined current IO buffer */
((*fptr)->Fptr)->open_count = 1; /* structure is currently used once */
((*fptr)->Fptr)->validcode = VALIDSTRUC; /* flag denoting valid structure */
((*fptr)->Fptr)->noextsyntax = 0; /* extended syntax can be used in filename */
ffldrc(*fptr, 0, REPORT_EOF, status); /* load first record */
fits_store_Fptr( (*fptr)->Fptr, status); /* store Fptr address */
if (ffrhdu(*fptr, &hdutyp, status) > 0) /* determine HDU structure */
{
ffpmsg(
"ffomem could not interpret primary array header of file: (ffomem)");
ffpmsg(url);
if (*status == UNKNOWN_REC)
ffpmsg("This does not look like a FITS file.");
ffclos(*fptr, status);
*fptr = 0; /* return null file pointer */
}
/* ---------------------------------------------------------- */
/* move to desired extension, if specified as part of the URL */
/* ---------------------------------------------------------- */
imagecolname[0] = '\0';
rowexpress[0] = '\0';
if (*extspec)
{
/* parse the extension specifier into individual parameters */
ffexts(extspec, &extnum,
extname, &extvers, &movetotype, imagecolname, rowexpress, status);
if (*status > 0)
return(*status);
if (extnum)
{
ffmahd(*fptr, extnum + 1, &hdutyp, status);
}
else if (*extname) /* move to named extension, if specified */
{
ffmnhd(*fptr, movetotype, extname, extvers, status);
}
if (*status > 0)
{
ffpmsg("ffomem could not move to the specified extension:");
if (extnum > 0)
{
snprintf(errmsg, FLEN_ERRMSG,
" extension number %d doesn't exist or couldn't be opened.",extnum);
ffpmsg(errmsg);
}
else
{
snprintf(errmsg, FLEN_ERRMSG,
" extension with EXTNAME = %s,", extname);
ffpmsg(errmsg);
if (extvers)
{
snprintf(errmsg, FLEN_ERRMSG,
" and with EXTVERS = %d,", extvers);
ffpmsg(errmsg);
}
if (movetotype != ANY_HDU)
{
snprintf(errmsg, FLEN_ERRMSG,
" and with XTENSION = %s,", hdtype[movetotype]);
ffpmsg(errmsg);
}
ffpmsg(" doesn't exist or couldn't be opened.");
}
return(*status);
}
}
return(*status);
}
/*--------------------------------------------------------------------------*/
int ffdkopn(fitsfile **fptr, /* O - FITS file pointer */
const char *name, /* I - full name of file to open */
int mode, /* I - 0 = open readonly; 1 = read/write */
int *status) /* IO - error status */
/*
Open an existing FITS file on magnetic disk with either readonly or
read/write access. The routine does not support CFITSIO's extended
filename syntax and simply uses the entire input 'name' string as
the name of the file.
*/
{
if (*status > 0)
return(*status);
*status = OPEN_DISK_FILE;
ffopen(fptr, name, mode, status);
return(*status);
}
/*--------------------------------------------------------------------------*/
int ffdopn(fitsfile **fptr, /* O - FITS file pointer */
const char *name, /* I - full name of file to open */
int mode, /* I - 0 = open readonly; 1 = read/write */
int *status) /* IO - error status */
/*
Open an existing FITS file with either readonly or read/write access. and
move to the first HDU that contains 'interesting' data, if the primary
array contains a null image (i.e., NAXIS = 0).
*/
{
if (*status > 0)
return(*status);
*status = SKIP_NULL_PRIMARY;
ffopen(fptr, name, mode, status);
return(*status);
}
/*--------------------------------------------------------------------------*/
int ffeopn(fitsfile **fptr, /* O - FITS file pointer */
const char *name, /* I - full name of file to open */
int mode, /* I - 0 = open readonly; 1 = read/write */
char *extlist, /* I - list of 'good' extensions to move to */
int *hdutype, /* O - type of extension that is moved to */
int *status) /* IO - error status */
/*
Open an existing FITS file with either readonly or read/write access. and
if the primary array contains a null image (i.e., NAXIS = 0) then attempt to
move to the first extension named in the extlist of extension names. If
none are found, then simply move to the 2nd extension.
*/
{
int hdunum, naxis = 0, thdutype, gotext=0;
char *ext, *textlist;
char *saveptr;
if (*status > 0)
return(*status);
if (ffopen(fptr, name, mode, status) > 0)
return(*status);
fits_get_hdu_num(*fptr, &hdunum);
fits_get_hdu_type(*fptr, &thdutype, status);
if (hdunum == 1 && thdutype == IMAGE_HDU) {
fits_get_img_dim(*fptr, &naxis, status);
}
/* We are in the "default" primary extension */
/* look through the extension list */
if( (hdunum == 1) && (naxis == 0) ){
if( extlist ){
gotext = 0;
textlist = malloc(strlen(extlist) + 1);
if (!textlist) {
*status = MEMORY_ALLOCATION;
return(*status);
}
strcpy(textlist, extlist);
for(ext=(char *)ffstrtok(textlist, " ",&saveptr); ext != NULL;
ext=(char *)ffstrtok(NULL," ",&saveptr)){
fits_movnam_hdu(*fptr, ANY_HDU, ext, 0, status);
if( *status == 0 ){
gotext = 1;
break;
} else {
*status = 0;
}
}
free(textlist);
}
if( !gotext ){
/* if all else fails, move to extension #2 and hope for the best */
fits_movabs_hdu(*fptr, 2, &thdutype, status);
}
}
if (hdutype) {
fits_get_hdu_type(*fptr, hdutype, status);
}
return(*status);
}
/*--------------------------------------------------------------------------*/
int fftopn(fitsfile **fptr, /* O - FITS file pointer */
const char *name, /* I - full name of file to open */
int mode, /* I - 0 = open readonly; 1 = read/write */
int *status) /* IO - error status */
/*
Open an existing FITS file with either readonly or read/write access. and
move to the first HDU that contains 'interesting' table (not an image).
*/
{
int hdutype;
if (*status > 0)
return(*status);
*status = SKIP_IMAGE;
ffopen(fptr, name, mode, status);
if (ffghdt(*fptr, &hdutype, status) <= 0) {
if (hdutype == IMAGE_HDU)
*status = NOT_TABLE;
}
return(*status);
}
/*--------------------------------------------------------------------------*/
int ffiopn(fitsfile **fptr, /* O - FITS file pointer */
const char *name, /* I - full name of file to open */
int mode, /* I - 0 = open readonly; 1 = read/write */
int *status) /* IO - error status */
/*
Open an existing FITS file with either readonly or read/write access. and
move to the first HDU that contains 'interesting' image (not an table).
*/
{
int hdutype;
if (*status > 0)
return(*status);
*status = SKIP_TABLE;
ffopen(fptr, name, mode, status);
if (ffghdt(*fptr, &hdutype, status) <= 0) {
if (hdutype != IMAGE_HDU)
*status = NOT_IMAGE;
}
return(*status);
}
/*--------------------------------------------------------------------------*/
int ffopentest(int soname, /* I - CFITSIO shared library version */
/* application program (fitsio.h file) */
fitsfile **fptr, /* O - FITS file pointer */
const char *name, /* I - full name of file to open */
int mode, /* I - 0 = open readonly; 1 = read/write */
int *status) /* IO - error status */
/*
Open an existing FITS file with either readonly or read/write access.
First test that the SONAME of fitsio.h used to build the CFITSIO library
is the same as was used in compiling the application program that
links to the library.
*/
{
if (soname != CFITSIO_SONAME)
{
printf("\nERROR: Mismatch in the CFITSIO_SONAME value in the fitsio.h include file\n");
printf("that was used to build the CFITSIO library, and the value in the include file\n");
printf("that was used when compiling the application program:\n");
printf(" Version used to build the CFITSIO library = %d\n",CFITSIO_SONAME);
printf(" Version included by the application program = %d\n",soname);
printf("\nFix this by recompiling and then relinking this application program \n");
printf("with the CFITSIO library.\n");
*status = FILE_NOT_OPENED;
return(*status);
}
/* now call the normal file open routine */
ffopen(fptr, name, mode, status);
return(*status);
}
/*--------------------------------------------------------------------------*/
int ffopen(fitsfile **fptr, /* O - FITS file pointer */
const char *name, /* I - full name of file to open */
int mode, /* I - 0 = open readonly; 1 = read/write */
int *status) /* IO - error status */
/*
Open an existing FITS file with either readonly or read/write access.
*/
{
fitsfile *newptr;
int ii, driver, hdutyp, hdunum, slen, writecopy, isopen;
LONGLONG filesize;
long rownum, nrows, goodrows;
int extnum, extvers, handle, movetotype, tstatus = 0, only_one = 0;
char urltype[MAX_PREFIX_LEN], infile[FLEN_FILENAME], outfile[FLEN_FILENAME];
char origurltype[MAX_PREFIX_LEN], extspec[FLEN_FILENAME];
char extname[FLEN_VALUE], rowfilter[FLEN_FILENAME], tblname[FLEN_VALUE];
char imagecolname[FLEN_VALUE], rowexpress[FLEN_FILENAME];
char binspec[FLEN_FILENAME], colspec[FLEN_FILENAME], pixfilter[FLEN_FILENAME];
char histfilename[FLEN_FILENAME];
char filtfilename[FLEN_FILENAME], compspec[FLEN_FILENAME];
char wtcol[FLEN_VALUE];
char minname[4][FLEN_VALUE], maxname[4][FLEN_VALUE];
char binname[4][FLEN_VALUE];
char *url;
double minin[4], maxin[4], binsizein[4], weight;
int imagetype, naxis = 1, haxis, recip;
int skip_null = 0, skip_image = 0, skip_table = 0, open_disk_file = 0;
char colname[4][FLEN_VALUE];
char errmsg[FLEN_ERRMSG];
char *hdtype[3] = {"IMAGE", "TABLE", "BINTABLE"};
char *rowselect = 0;
if (*status > 0)
return(*status);
if (*status == SKIP_NULL_PRIMARY)
{
/* this special status value is used as a flag by ffdopn to tell */
/* ffopen to skip over a null primary array when opening the file. */
skip_null = 1;
*status = 0;
}
else if (*status == SKIP_IMAGE)
{
/* this special status value is used as a flag by fftopn to tell */
/* ffopen to move to 1st significant table when opening the file. */
skip_image = 1;
*status = 0;
}
else if (*status == SKIP_TABLE)
{
/* this special status value is used as a flag by ffiopn to tell */
/* ffopen to move to 1st significant image when opening the file. */
skip_table = 1;
*status = 0;
}
else if (*status == OPEN_DISK_FILE)
{
/* this special status value is used as a flag by ffdkopn to tell */
/* ffopen to not interpret the input filename using CFITSIO's */
/* extended filename syntax, and simply open the specified disk file */
open_disk_file = 1;
*status = 0;
}
*fptr = 0; /* initialize null file pointer */
writecopy = 0; /* have we made a write-able copy of the input file? */
if (need_to_initialize) { /* this is called only once */
*status = fits_init_cfitsio();
}
if (*status > 0)
return(*status);
url = (char *) name;
while (*url == ' ') /* ignore leading spaces in the filename */
url++;
if (*url == '\0')
{
ffpmsg("Name of file to open is blank. (ffopen)");
return(*status = FILE_NOT_OPENED);
}
if (open_disk_file)
{
/* treat the input URL literally as the name of the file to open */
/* and don't try to parse the URL using the extended filename syntax */
if (strlen(url) > FLEN_FILENAME - 1) {
ffpmsg("Name of file to open is too long. (ffopen)");
return(*status = FILE_NOT_OPENED);
}
strcpy(infile,url);
strcpy(urltype, "file://");
outfile[0] = '\0';
extspec[0] = '\0';
binspec[0] = '\0';
colspec[0] = '\0';
rowfilter[0] = '\0';
pixfilter[0] = '\0';
compspec[0] = '\0';
}
else
{
/* parse the input file specification */
/* NOTE: This routine tests that all the strings do not */
/* overflow the standard buffer sizes (FLEN_FILENAME, etc.) */
/* therefore in general we do not have to worry about buffer */
/* overflow of any of the returned strings. */
/* call the newer version of this parsing routine that supports 'compspec' */
ffifile2(url, urltype, infile, outfile, extspec,
rowfilter, binspec, colspec, pixfilter, compspec, status);
}
if (*status > 0)
{
ffpmsg("could not parse the input filename: (ffopen)");
ffpmsg(url);
return(*status);
}
imagecolname[0] = '\0';
rowexpress[0] = '\0';
if (*extspec)
{
slen = strlen(extspec);
if (extspec[slen - 1] == '#') { /* special symbol to mean only copy this extension */
extspec[slen - 1] = '\0';
only_one = 1;
}
/* parse the extension specifier into individual parameters */
ffexts(extspec, &extnum,
extname, &extvers, &movetotype, imagecolname, rowexpress, status);
if (*status > 0)
return(*status);
}
/*-------------------------------------------------------------------*/
/* special cases: */
/*-------------------------------------------------------------------*/
histfilename[0] = '\0';
filtfilename[0] = '\0';
if (*outfile && (*binspec || *imagecolname || *pixfilter))
{
/* if binspec or imagecolumn are specified, then the */
/* output file name is intended for the final image, */
/* and not a copy of the input file. */
strcpy(histfilename, outfile);
outfile[0] = '\0';
}
else if (*outfile && (*rowfilter || *colspec))
{
/* if rowfilter or colspece are specified, then the */
/* output file name is intended for the filtered file */
/* and not a copy of the input file. */
strcpy(filtfilename, outfile);
outfile[0] = '\0';
}
/*-------------------------------------------------------------------*/
/* check if this same file is already open, and if so, attach to it */
/*-------------------------------------------------------------------*/
FFLOCK;
if (fits_already_open(fptr, url, urltype, infile, extspec, rowfilter,
binspec, colspec, mode, open_disk_file, &isopen, status) > 0)
{
FFUNLOCK;
return(*status);
}
FFUNLOCK;
if (isopen) {
goto move2hdu;
}
/* get the driver number corresponding to this urltype */
*status = urltype2driver(urltype, &driver);
if (*status > 0)
{
ffpmsg("could not find driver for this file: (ffopen)");
ffpmsg(urltype);
ffpmsg(url);
return(*status);
}
/*-------------------------------------------------------------------
deal with all those messy special cases which may require that
a different driver be used:
- is disk file compressed?
- are ftp:, gsiftp:, or http: files compressed?
- has user requested that a local copy be made of
the ftp or http file?
-------------------------------------------------------------------*/
if (driverTable[driver].checkfile)
{
strcpy(origurltype,urltype); /* Save the urltype */
/* 'checkfile' may modify the urltype, infile and outfile strings */
*status = (*driverTable[driver].checkfile)(urltype, infile, outfile);
if (*status)
{
ffpmsg("checkfile failed for this file: (ffopen)");
ffpmsg(url);
return(*status);
}
if (strcmp(origurltype, urltype)) /* did driver changed on us? */
{
*status = urltype2driver(urltype, &driver);
if (*status > 0)
{
ffpmsg("could not change driver for this file: (ffopen)");
ffpmsg(url);
ffpmsg(urltype);
return(*status);
}
}
}
/* call appropriate driver to open the file */
if (driverTable[driver].open)
{
FFLOCK; /* lock this while searching for vacant handle */
*status = (*driverTable[driver].open)(infile, mode, &handle);
FFUNLOCK;
if (*status > 0)
{
ffpmsg("failed to find or open the following file: (ffopen)");
ffpmsg(url);
return(*status);
}
}
else
{
ffpmsg("cannot open an existing file of this type: (ffopen)");
ffpmsg(url);
return(*status = FILE_NOT_OPENED);
}
/* get initial file size */
*status = (*driverTable[driver].size)(handle, &filesize);
if (*status > 0)
{
(*driverTable[driver].close)(handle); /* close the file */
ffpmsg("failed get the size of the following file: (ffopen)");
ffpmsg(url);
return(*status);
}
/* allocate fitsfile structure and initialize = 0 */
*fptr = (fitsfile *) calloc(1, sizeof(fitsfile));
if (!(*fptr))
{
(*driverTable[driver].close)(handle); /* close the file */
ffpmsg("failed to allocate structure for following file: (ffopen)");
ffpmsg(url);
return(*status = MEMORY_ALLOCATION);
}
/* allocate FITSfile structure and initialize = 0 */
(*fptr)->Fptr = (FITSfile *) calloc(1, sizeof(FITSfile));
if (!((*fptr)->Fptr))
{
(*driverTable[driver].close)(handle); /* close the file */
ffpmsg("failed to allocate structure for following file: (ffopen)");
ffpmsg(url);
free(*fptr);
*fptr = 0;
return(*status = MEMORY_ALLOCATION);
}
slen = strlen(url) + 1;
slen = maxvalue(slen, 32); /* reserve at least 32 chars */
((*fptr)->Fptr)->filename = (char *) malloc(slen); /* mem for file name */
if ( !(((*fptr)->Fptr)->filename) )
{
(*driverTable[driver].close)(handle); /* close the file */
ffpmsg("failed to allocate memory for filename: (ffopen)");
ffpmsg(url);
free((*fptr)->Fptr);
free(*fptr);
*fptr = 0; /* return null file pointer */
return(*status = MEMORY_ALLOCATION);
}
/* mem for headstart array */
((*fptr)->Fptr)->headstart = (LONGLONG *) calloc(1001, sizeof(LONGLONG));
if ( !(((*fptr)->Fptr)->headstart) )
{
(*driverTable[driver].close)(handle); /* close the file */
ffpmsg("failed to allocate memory for headstart array: (ffopen)");
ffpmsg(url);
free( ((*fptr)->Fptr)->filename);
free((*fptr)->Fptr);
free(*fptr);
*fptr = 0; /* return null file pointer */
return(*status = MEMORY_ALLOCATION);
}
/* mem for file I/O buffers */
((*fptr)->Fptr)->iobuffer = (char *) calloc(NIOBUF, IOBUFLEN);
if ( !(((*fptr)->Fptr)->iobuffer) )
{
(*driverTable[driver].close)(handle); /* close the file */
ffpmsg("failed to allocate memory for iobuffer array: (ffopen)");
ffpmsg(url);
free( ((*fptr)->Fptr)->headstart); /* free memory for headstart array */
free( ((*fptr)->Fptr)->filename);
free((*fptr)->Fptr);
free(*fptr);
*fptr = 0; /* return null file pointer */
return(*status = MEMORY_ALLOCATION);
}
/* initialize the ageindex array (relative age of the I/O buffers) */
/* and initialize the bufrecnum array as being empty */
for (ii = 0; ii < NIOBUF; ii++) {
((*fptr)->Fptr)->ageindex[ii] = ii;
((*fptr)->Fptr)->bufrecnum[ii] = -1;
}
/* store the parameters describing the file */
((*fptr)->Fptr)->MAXHDU = 1000; /* initial size of headstart */
((*fptr)->Fptr)->filehandle = handle; /* file handle */
((*fptr)->Fptr)->driver = driver; /* driver number */
strcpy(((*fptr)->Fptr)->filename, url); /* full input filename */
((*fptr)->Fptr)->filesize = filesize; /* physical file size */
((*fptr)->Fptr)->logfilesize = filesize; /* logical file size */
((*fptr)->Fptr)->writemode = mode; /* read-write mode */
((*fptr)->Fptr)->datastart = DATA_UNDEFINED; /* unknown start of data */
((*fptr)->Fptr)->curbuf = -1; /* undefined current IO buffer */
((*fptr)->Fptr)->open_count = 1; /* structure is currently used once */
((*fptr)->Fptr)->validcode = VALIDSTRUC; /* flag denoting valid structure */
((*fptr)->Fptr)->only_one = only_one; /* flag denoting only copy single extension */
((*fptr)->Fptr)->noextsyntax = open_disk_file; /* true if extended syntax is disabled */
ffldrc(*fptr, 0, REPORT_EOF, status); /* load first record */
fits_store_Fptr( (*fptr)->Fptr, status); /* store Fptr address */
if (ffrhdu(*fptr, &hdutyp, status) > 0) /* determine HDU structure */
{
ffpmsg(
"ffopen could not interpret primary array header of file: ");
ffpmsg(url);
if (*status == UNKNOWN_REC)
ffpmsg("This does not look like a FITS file.");
ffclos(*fptr, status);
*fptr = 0; /* return null file pointer */
return(*status);
}
/* ------------------------------------------------------------- */
/* At this point, the input file has been opened. If outfile was */
/* specified, then we have opened a copy of the file, not the */
/* original file so it is safe to modify it if necessary */
/* ------------------------------------------------------------- */
if (*outfile)
writecopy = 1;
move2hdu:
/* ---------------------------------------------------------- */
/* move to desired extension, if specified as part of the URL */
/* ---------------------------------------------------------- */
if (*extspec)
{
if (extnum) /* extension number was specified */
{
ffmahd(*fptr, extnum + 1, &hdutyp, status);
}
else if (*extname) /* move to named extension, if specified */
{
ffmnhd(*fptr, movetotype, extname, extvers, status);
}
if (*status > 0) /* clean up after error */
{
ffpmsg("ffopen could not move to the specified extension:");
if (extnum > 0)
{
snprintf(errmsg, FLEN_ERRMSG,
" extension number %d doesn't exist or couldn't be opened.",extnum);
ffpmsg(errmsg);
}
else
{
snprintf(errmsg, FLEN_ERRMSG,
" extension with EXTNAME = %s,", extname);
ffpmsg(errmsg);
if (extvers)
{
snprintf(errmsg, FLEN_ERRMSG,
" and with EXTVERS = %d,", extvers);
ffpmsg(errmsg);
}
if (movetotype != ANY_HDU)
{
snprintf(errmsg, FLEN_ERRMSG,
" and with XTENSION = %s,", hdtype[movetotype]);
ffpmsg(errmsg);
}
ffpmsg(" doesn't exist or couldn't be opened.");
}
ffclos(*fptr, status);
*fptr = 0; /* return null file pointer */
return(*status);
}
}
else if (skip_null || skip_image || skip_table ||
(*imagecolname || *colspec || *rowfilter || *binspec))
{
/* ------------------------------------------------------------------