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utils_conceptrule.py
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utils_conceptrule.py
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"""Data utils for logic-memnn."""
import json
import socket
import numpy as np
import json_lines
import re
import keras.callbacks as C
from keras.utils import Sequence
from keras.preprocessing.sequence import pad_sequences
from data_gen import CHAR_IDX
from word_dict_gen_conceptrule import WORD_INDEX
import os
import random
class LogicSeq(Sequence):
"""Sequence generator for normal logic programs."""
def __init__(self, datasets, batch_size, train=True,
shuffle=True, pad=False, zeropad=True):
self.datasets = datasets or [[]]
# We distribute batch evenly so it must divide the batc size
assert batch_size % len(self.datasets) == 0, "Number of datasets must divide batch size."
self.batch_size = batch_size
self.train = train
self.shuffle = shuffle
self.pad = pad
self.zeropad = zeropad
seed_value = 0
os.environ['PYTHONHASHSEED'] = str(seed_value)
random.seed(seed_value)
np.random.seed(seed_value)
def __len__(self):
return int(np.ceil(sum(map(len, self.datasets))/ self.batch_size))
def on_epoch_end(self):
"""Shuffle data at the end of epoch."""
if self.shuffle:
for ds in self.datasets:
np.random.shuffle(ds)
def __getitem__(self, idx):
dpoints = list()
per_ds_bs = self.batch_size//len(self.datasets)
for ds in self.datasets:
dpoints.extend(ds[idx*per_ds_bs:(idx+1)*per_ds_bs])
# Create batch
ctxs, queries, targets = list(), list(), list()
for ctx, q, t in dpoints:
if self.shuffle:
np.random.shuffle(ctx)
# rules = [r.replace(':-', '.').replace(';', '.').split('.')[:-1]
# for r in ctx]
rules = []
for r in ctx:
result = []
result.append(r)
rules.append(result)
# if self.pad:
# rules.append(['()']) # Append blank rule
# if self.zeropad: pred.split(" ") q.split(" ") filter_data(re.split(r"[\s]", q))
# rules.append(['']) # Append null sentinel filter_data(re.split(r"[\s]", pred))
rules = [[[WORD_INDEX[c] for c in filter_data(re.split(r"[\s]", pred))]
for pred in r]
for r in rules]
ctxs.append(rules)
queries.append([WORD_INDEX[c] for c in filter_data(re.split(r"[\s]", q))]) # Remove '.' at the end
targets.append(t)
vctxs = np.zeros((len(dpoints),
max([len(rs) for rs in ctxs]),
max([len(ps) for rs in ctxs for ps in rs]),
max([len(cs) for rs in ctxs for ps in rs for cs in ps])),
dtype='int')
# Contexts
for i in range(len(dpoints)):
# Rules in context (ie program)
for j in range(len(ctxs[i])):
# Predicates in rules
for k in range(len(ctxs[i][j])):
# Chars in predicates
for l in range(len(ctxs[i][j][k])):
vctxs[i, j, k, l] = ctxs[i][j][k][l]
xs = [vctxs, pad_sequences(queries, padding='post')]
if self.train:
return xs, np.array(targets)
return xs
@staticmethod
def parse_file(fname, shuffle=True):
"""Parse logic program data given fname."""
dpoints = list()
with open(fname) as f:
for l in json_lines.reader(f):
ctx = list()
questions = l["questions"]
context = l["context"].replace("\n", " ")
context = context.replace(",", "")
context = context.replace("!", "")
context = context.replace("\\", "")
#context = context.replace(".", "")
context = re.sub(r'\s+', ' ', context)
context = context.lower()
for i in range(len(questions)):
text = questions[i]["text"]
label = questions[i]["label"]
if label == True:
t = 1
else:
t = 0
q = re.sub(r'\s+', ' ', text)
q = q.replace('.','')
q = q.replace('!', '')
q = q.replace(',', '')
q = q.replace('\\', '')
#ctx = context.split(".")
context = context.replace('ph.d.','phd')
context = context.replace('t.v.', 'tv')
q = q.replace('ph.d.','phd')
q = q.replace('t.v.', 'tv')
ctx = filter_data(re.split(r"[.]", context))
q = q.lower()
#ctx = re.split(r"([.])", context)
#ctx = ["".join(i) for i in zip(ctx[0::2], ctx[1::2])]
dpoints.append((ctx, q, int(t)))
if shuffle:
np.random.shuffle(dpoints)
return dpoints
@classmethod
def from_file(cls, fname, batch_size, pad=False, verbose=True):
"""Load logic programs from given fname."""
dpoints = cls.parse_file(fname)
if verbose:
print("Example data points from:", fname)
print(dpoints[:4])
return cls([dpoints], batch_size, pad=pad)
@classmethod
def from_files(cls, fnames, batch_size, pad=False, verbose=True):
"""Load several logic program files return a singel sequence generator."""
datasets = [cls.parse_file(f) for f in fnames]
if verbose:
print("Loaded files:", fnames)
return cls(datasets, batch_size, pad=pad)
class ThresholdStop(C.Callback):
"""Stop when monitored value is greater than threshold."""
def __init__(self, monitor='val_acc', threshold=1):
super().__init__()
self.monitor = monitor
self.threshold = threshold
def on_epoch_end(self, epoch, logs=None):
current = logs.get(self.monitor)
if current >= self.threshold:
self.model.stop_training = True
class StatefulCheckpoint(C.ModelCheckpoint):
"""Save extra checkpoint data to resume training."""
def __init__(self, weight_file, state_file=None, **kwargs):
"""Save the state (epoch etc.) along side weights."""
super().__init__(weight_file, **kwargs)
self.state_f = state_file
self.hostname = socket.gethostname()
self.state = dict()
if self.state_f:
# Load the last state if any
try:
with open(self.state_f, 'r') as f:
self.state = json.load(f)
self.best = self.state['best']
except Exception as e: # pylint: disable=broad-except
print("Skipping last state:", e)
def on_train_begin(self, logs=None):
prefix = "Resuming" if self.state else "Starting"
print("{} training on {}".format(prefix, self.hostname))
def on_epoch_end(self, epoch, logs=None):
"""Saves training state as well as weights."""
super().on_epoch_end(epoch, logs)
if self.state_f:
state = {'epoch': epoch+1, 'best': self.best,
'hostname': self.hostname}
state.update(logs)
state.update(self.params)
with open(self.state_f, 'w') as f:
json.dump(state, f)
def get_last_epoch(self, initial_epoch=0):
"""Return last saved epoch if any, or return default argument."""
return self.state.get('epoch', initial_epoch)
def on_train_end(self, logs=None):
print("Training ending on {}".format(self.hostname))
# 方法2:在切分后,过滤掉split返回的list中的空字符串
# filter_data()函数的功能是:对于一个由string组成的list [str1, str2, str3, ......],过滤掉那些空字符串''、特殊字符串'\n',并返回过滤后的新list
def not_break(sen):
return (sen != '\n' and sen != '\u3000' and sen != '' and not sen.isspace())
def filter_data(ini_data):
# ini_data是由句子组成的string
new_data = list(filter(not_break, [data.strip() for data in ini_data]))
return new_data