{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":52777598,"defaultBranch":"main","name":"yeast-GEM","ownerLogin":"SysBioChalmers","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2016-02-29T08:58:07.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/12411112?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1715212571.0","currentOid":""},"activityList":{"items":[{"before":"90074c0df6b50de839585142144a46edae5defe5","after":"b1faff7e10e21b93400a3f779ac63cf6c05c1858","ref":"refs/heads/gh-pages","pushedAt":"2024-05-23T23:06:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"chore: update memote history report","shortMessageHtmlLink":"chore: update memote history report"}},{"before":"06008682d36bccd63c2402088dc28f5b8e3a5888","after":"6dea2874284141686e9d1776a94901aa9f7a06d3","ref":"refs/heads/develop","pushedAt":"2024-05-23T22:50:22.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"},"commit":{"message":"chore: saveYeastModel for next RAVEN (2.9.1)","shortMessageHtmlLink":"chore: saveYeastModel for next RAVEN (2.9.1)"}},{"before":"d71ab008dd29596e94609c5d3f21c1e558f0d66f","after":"06008682d36bccd63c2402088dc28f5b8e3a5888","ref":"refs/heads/develop","pushedAt":"2024-05-23T22:40:33.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"},"commit":{"message":"chore: restore develop branch","shortMessageHtmlLink":"chore: restore develop branch"}},{"before":"fa3ea4c89c35445f3ca88b8cfda76ec4b80ce595","after":"90074c0df6b50de839585142144a46edae5defe5","ref":"refs/heads/gh-pages","pushedAt":"2024-05-09T00:22:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"chore: update memote history report","shortMessageHtmlLink":"chore: update memote history report"}},{"before":"20d4e6dda4bd5ef0281360545eb14ec3d8d4e143","after":null,"ref":"refs/heads/add_mets_cons_from_YMDB","pushedAt":"2024-05-08T23:56:11.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"}},{"before":"e1d5435a88e8ee16e6a0bd8c35898894fa29e171","after":"350628dfeb1743de571e7783bb0bea15161dbc88","ref":"refs/heads/main","pushedAt":"2024-05-08T23:56:00.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"},"commit":{"message":"Add mets concentration from ymdb (#364)\n\n* add metabolites concentration from YMDB\r\n\r\nUpdate add_conc.m\r\n\r\nUpdate get_YMDB_data.py\r\n\r\nReorganize data.\r\n\r\nRemove YMDBXXX_transposed and change allConcData.xlsx to csv format.\r\n\r\n* fix: remove model with concentrations included\r\n\r\n* refactor: reorganize scripts and data\r\n\r\n---------\r\n\r\nCo-authored-by: Eduard Kerkhoven ","shortMessageHtmlLink":"Add mets concentration from ymdb (#364)"}},{"before":"ed2f0b6525e79a62405bb4faa271cd6970eb83ca","after":"20d4e6dda4bd5ef0281360545eb14ec3d8d4e143","ref":"refs/heads/add_mets_cons_from_YMDB","pushedAt":"2024-04-27T20:04:54.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"},"commit":{"message":"refactor: reorganize scripts and data","shortMessageHtmlLink":"refactor: reorganize scripts and data"}},{"before":"8eeea35f57e795a875539bd5fdc0b0eb21fb8f3f","after":"ed2f0b6525e79a62405bb4faa271cd6970eb83ca","ref":"refs/heads/add_mets_cons_from_YMDB","pushedAt":"2024-04-24T06:53:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cheng-yu-zhang","name":"chengyu zhang","path":"/cheng-yu-zhang","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/95357512?s=80&v=4"},"commit":{"message":"Reorganize data.\n\nRemove YMDBXXX_transposed and change allConcData.xlsx to csv format.","shortMessageHtmlLink":"Reorganize data."}},{"before":"9bbc2ae664e97ca69524d5a6b0ead9bb37bd2bf5","after":"8eeea35f57e795a875539bd5fdc0b0eb21fb8f3f","ref":"refs/heads/add_mets_cons_from_YMDB","pushedAt":"2024-03-06T12:33:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cheng-yu-zhang","name":"chengyu zhang","path":"/cheng-yu-zhang","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/95357512?s=80&v=4"},"commit":{"message":"Update get_YMDB_data.py","shortMessageHtmlLink":"Update get_YMDB_data.py"}},{"before":"3403969a4994050e67bbee30ec0c85187e6326b6","after":"fa3ea4c89c35445f3ca88b8cfda76ec4b80ce595","ref":"refs/heads/gh-pages","pushedAt":"2024-03-06T12:16:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"chore: update memote history report","shortMessageHtmlLink":"chore: update memote history report"}},{"before":null,"after":"9bbc2ae664e97ca69524d5a6b0ead9bb37bd2bf5","ref":"refs/heads/add_mets_cons_from_YMDB","pushedAt":"2024-03-06T11:49:17.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"cheng-yu-zhang","name":"chengyu zhang","path":"/cheng-yu-zhang","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/95357512?s=80&v=4"},"commit":{"message":"Update add_conc.m","shortMessageHtmlLink":"Update add_conc.m"}},{"before":"d879dff20d5b662175b6b6d36fcc9b48ff6939b7","after":"3403969a4994050e67bbee30ec0c85187e6326b6","ref":"refs/heads/gh-pages","pushedAt":"2023-12-08T07:21:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"chore: update memote history report","shortMessageHtmlLink":"chore: update memote history report"}},{"before":"4e19e0defb0e3eef60bd386f8d05d236fe28341a","after":"d879dff20d5b662175b6b6d36fcc9b48ff6939b7","ref":"refs/heads/gh-pages","pushedAt":"2023-12-05T22:43:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"chore: update memote history report","shortMessageHtmlLink":"chore: update memote history report"}},{"before":"1bda7580488c1036c7ed558964d44181a56f7c99","after":"e1d5435a88e8ee16e6a0bd8c35898894fa29e171","ref":"refs/heads/main","pushedAt":"2023-12-05T22:17:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"b3fc92be7ea7f85f60325153acbcf3ef4d605990","after":"4e19e0defb0e3eef60bd386f8d05d236fe28341a","ref":"refs/heads/gh-pages","pushedAt":"2023-12-04T09:11:27.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"chore: update memote history report","shortMessageHtmlLink":"chore: update memote history report"}},{"before":"d2397b489008d515ac547470859f201f74e9a289","after":"b3fc92be7ea7f85f60325153acbcf3ef4d605990","ref":"refs/heads/gh-pages","pushedAt":"2023-12-04T08:59:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"chore: update memote release report","shortMessageHtmlLink":"chore: update memote release report"}},{"before":"0c50600f81c625a70d46b7980f44a5290846c604","after":"1bda7580488c1036c7ed558964d44181a56f7c99","ref":"refs/heads/main","pushedAt":"2023-12-04T08:46:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"},"commit":{"message":"chore: version 9.0.0","shortMessageHtmlLink":"chore: version 9.0.0"}},{"before":"32def0143c4cc70b0ddb74bd95b78eb728aad02b","after":"d2397b489008d515ac547470859f201f74e9a289","ref":"refs/heads/gh-pages","pushedAt":"2023-12-04T08:37:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"chore: update memote history report","shortMessageHtmlLink":"chore: update memote history report"}},{"before":"0b9e4c6bb11cc9f204ec5d64253b57dc02682c94","after":"0c50600f81c625a70d46b7980f44a5290846c604","ref":"refs/heads/main","pushedAt":"2023-12-04T08:16:22.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"},"commit":{"message":"Merge pull request #361 from SysBioChalmers/develop\n\nyeast 9.0.0","shortMessageHtmlLink":"Merge pull request #361 from SysBioChalmers/develop"}},{"before":"2237a9fbc341fb993a4276448e0cd57fd650eabc","after":"d71ab008dd29596e94609c5d3f21c1e558f0d66f","ref":"refs/heads/develop","pushedAt":"2023-12-04T08:11:56.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"},"commit":{"message":"Merge branch 'main' into develop\n\n# Conflicts:\n#\tREADME.md\n#\tmodel/yeast-GEM.xml\n#\tmodel/yeast-GEM.yml","shortMessageHtmlLink":"Merge branch 'main' into develop"}},{"before":"3e1e0512b4e157c6d77f09a63750cc41809cd244","after":"32def0143c4cc70b0ddb74bd95b78eb728aad02b","ref":"refs/heads/gh-pages","pushedAt":"2023-12-03T11:43:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"chore: update memote history report","shortMessageHtmlLink":"chore: update memote history report"}},{"before":"527644bec39995e41984ec115984b60253428cac","after":null,"ref":"refs/heads/fix/metFormulas","pushedAt":"2023-12-03T11:18:10.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"}},{"before":"14ca363efdaad26ff99bd84f11f4629fdddcb70f","after":"2237a9fbc341fb993a4276448e0cd57fd650eabc","ref":"refs/heads/develop","pushedAt":"2023-12-03T11:18:07.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"},"commit":{"message":"fix: unbalanced reactions and incorrect metFormulas (#360)\n\n* feat: increaseVersion uses YAML model\r\n\r\n* fix: correct metFormulas of dolichol-related mets\r\n\r\n* feat: additional correcctions\r\n\r\n* fix: r_4196 NAD missing\r\n\r\n* chore: generate new model files","shortMessageHtmlLink":"fix: unbalanced reactions and incorrect metFormulas (#360)"}},{"before":"9bf81692aa12d66bfc1057c110f2ca39ef137fbd","after":null,"ref":"refs/heads/feat/yaml-IO","pushedAt":"2023-12-02T23:56:56.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"}},{"before":"fb054d96b20e46d8e340070b9296e3cae1de0101","after":"3e1e0512b4e157c6d77f09a63750cc41809cd244","ref":"refs/heads/gh-pages","pushedAt":"2023-12-02T23:43:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"chore: update memote history report","shortMessageHtmlLink":"chore: update memote history report"}},{"before":"00a918f7e384af99d69f992e6f74dda9f961547a","after":"527644bec39995e41984ec115984b60253428cac","ref":"refs/heads/fix/metFormulas","pushedAt":"2023-12-02T23:16:32.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"},"commit":{"message":"chore: generate new model files","shortMessageHtmlLink":"chore: generate new model files"}},{"before":"9a326a113a0d1c183644ec5f932f6cee5ddb0402","after":"fb054d96b20e46d8e340070b9296e3cae1de0101","ref":"refs/heads/gh-pages","pushedAt":"2023-10-20T09:39:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"chore: update memote history report","shortMessageHtmlLink":"chore: update memote history report"}},{"before":"4a4421c26c50492198b70686458bbbece1c53cb5","after":"00a918f7e384af99d69f992e6f74dda9f961547a","ref":"refs/heads/fix/metFormulas","pushedAt":"2023-10-20T07:56:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"},"commit":{"message":"feat: additional correcctions","shortMessageHtmlLink":"feat: additional correcctions"}},{"before":"fc0c330e49db2a0d5251e99303fda98f7cbf77d6","after":"9a326a113a0d1c183644ec5f932f6cee5ddb0402","ref":"refs/heads/gh-pages","pushedAt":"2023-10-18T08:43:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"chore: update memote history report","shortMessageHtmlLink":"chore: update memote history report"}},{"before":null,"after":"4a4421c26c50492198b70686458bbbece1c53cb5","ref":"refs/heads/fix/metFormulas","pushedAt":"2023-10-18T07:24:12.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"edkerk","name":"Eduard Kerkhoven","path":"/edkerk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7326655?s=80&v=4"},"commit":{"message":"fix: correct metFormulas of dolichol-related mets","shortMessageHtmlLink":"fix: correct metFormulas of dolichol-related mets"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEUoOqxgA","startCursor":null,"endCursor":null}},"title":"Activity ยท SysBioChalmers/yeast-GEM"}