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Tpctools

Description

This project is a collection of tools for the management of Textpresso Central project.

Textpressocentral is a platform to perform full text literature searches, view and curate research papers, train and apply machine learning (ML) and text mining (TM) algorithm for semantic analysis and curation purposes. The user is supported in this task by giving him capabilities to select, edit and store lists of papers, sentences, term and categories in order to perform training and mining. The system is designed with the intent to empower the user to perform as many operations on a literature corpus or a particular paper as possible. It uses state-of-the-art software packages and frameworks such as the Unstructured Information Management Architecture (UIMA), Lucene and Wt. The corpus of papers can be build from fulltext articles that are available in PDF or NXML format.

Installation

Dependencies

libtpc must be installed in the system.


NOTE

cmake version >= 3.5 is required.


Compile and Install tpctools

To compile and install the project, run the following commands from the root directory of the repository:

$ mkdir cmake-build-release && cd cmake-build-release
$ cmake -DCMAKE_BUILD_TYPE=Release ..
$ make && make install

This will install the tools in the default location (/usr/local/).

Debugging

The project can be also compiled and installed in debug mode, with the following commands:

$ mkdir cmake-build-debug && cd cmake-build-debug
$ cmake -DCMAKE_BUILD_TYPE=Debug ..
$ make && make install

Install libtpc on Textpresso Docker image

Texpresso provides a Docker image with all the required dependencies pre-installed. To build it and run it, follow the README file in libtpc project.

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Tools for the management of Textpressocentral

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