r-targets.def

Bootstrap: docker
From: rocker/tidyverse:4.2.2

# Build with:
# singularity build --fakeroot r-targets.sif r-targets.def

%environment
    export LC_ALL=C
    export LANGUAGE=en
    export TZ="Europe/Luxembourg"
    export LANG=C.UTF-8


%files
    renv.lock.prod /opt/renv.lock

%post
    apt-get update && apt-get install -y \
        build-essential \
        cmake libnng-dev \
        libxml2-dev \
        libsimde-dev \
        libreadline-dev libpcre2-dev libpng-dev \
        libglpk-dev \
        libfreetype6-dev libpng-dev libtiff5-dev libjpeg-dev \
        libfontconfig1-dev \
        libcairo2-dev libmagick++-dev libpoppler-cpp-dev \
        pandoc \
        libharfbuzz-dev libfribidi-dev
    echo "options(renv.config.pak.enabled = TRUE, download.file.method = 'libcurl', Ncpus = 4)" | tee /usr/local/lib/R/etc/Rprofile.site
    Rscript -e 'install.packages("renv", repos = "https://packagemanager.posit.co/cran/__linux__/jammy/latest/")'
    cd /opt
    Rscript -e 'renv::restore(repos = c(CRAN = "https://packagemanager.posit.co/cran/__linux__/jammy/latest/"))'
    # specific recent versions for mirai / crew / nanonext
    Rscript -e 'install.packages(c("nanonext", "mirai"), repos = "https://shikokuchuo.r-universe.dev")'
    Rscript -e 'install.packages(c("targets", "crew"), type = "source", repos = "https://packagemanager.posit.co/cran/__linux__/jammy/latest/")'

%labels
    Author aurelien.ginolhac@uni.lu
    Version v0.0.1