From a2ceef60d3ee669b70a90b74ae5a0a5d8611719b Mon Sep 17 00:00:00 2001 From: Robert Ernst Date: Fri, 1 Mar 2024 15:31:48 +0100 Subject: [PATCH] Sort by lane --- clarity_epp/export/illumina.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/clarity_epp/export/illumina.py b/clarity_epp/export/illumina.py index 89f21fb..f4ee596 100644 --- a/clarity_epp/export/illumina.py +++ b/clarity_epp/export/illumina.py @@ -281,7 +281,7 @@ def create_samplesheet(lims, process_id, output_file): sample_sheet.append(bcl_convert_data_header) # Add samples to SampleSheet - for lane, lane_samples in samplesheet_samples.items(): + for lane, lane_samples in sorted(samplesheet_samples.items()): for sample in lane_samples: bcl_convert_data_row = "{sample_name},{index_1},{index_2},{override_cycles},{project}".format( sample_name=sample,