Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update/Add unit tests Post Poly2 Update #85

Open
5 tasks
sedavid01 opened this issue Mar 7, 2024 · 0 comments
Open
5 tasks

Update/Add unit tests Post Poly2 Update #85

sedavid01 opened this issue Mar 7, 2024 · 0 comments
Assignees
Labels
bug Something isn't working documentation Improvements or additions to documentation enhancement New feature or request

Comments

@sedavid01
Copy link
Collaborator

Goal: Update the unit test suite in the R package to account for the updated implementation of the poly2 model.

Needs:

  • New test fixture from HTTR (ensure that these are masked); gene level, signature level - updated data from HTTR team (Contacts: Logan/Derik); may also want to include some additional poly2 cases (both monotonic and biphasic)
  • New test fixture from HTPP (ensure that these are masked); feature level, category level, and global level - updated data from HTPP team (Contact: Derik); may also want to include some additional poly2 cases (both monotonic and biphasic)
  • Update the non-datastream specific unit tests that no longer work due to implementation of poly2
  • Extend unit tests to account for implementation updates in poly2 and greater set of optional cases
  • Investigate whether there is a way to handle the anticipated warning messages from poly2 in the unit tests - if so implement work around in the unit tests
@sedavid01 sedavid01 added bug Something isn't working documentation Improvements or additions to documentation enhancement New feature or request labels Mar 7, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
bug Something isn't working documentation Improvements or additions to documentation enhancement New feature or request
Projects
None yet
Development

No branches or pull requests

3 participants