save-two-region-model-data.yaml

# This workflow is designed to be manually triggered only.
name: Save two-region data as .rds in parallel runs

on:
  workflow_dispatch: # allow manual trigger
    inputs:
        model_spec:
            description: "Model spec file (in quotes)"
            required: true
            default: "StateIOv1.0.0-s"
            type: string


jobs:
  generate-save-data:
    runs-on: ${{ matrix.config.os }}

    name: ${{ matrix.script-run }}, ${{ matrix.data-year }} (${{ matrix.config.os}}, ${{ matrix.config.r}})
    
    strategy:
      fail-fast: false
      matrix:
        config:
          - {os: ubuntu-latest, r: 'release'}
        script-run:
          - data-raw/TwoRegionModel.R
        data-year:
          - 2012
          - 2013
          - 2014
          - 2015
          - 2016
          - 2017
          - 2018
          - 2019
          - 2020

    # env:
      # R_REMOTES_NO_ERRORS_FROM_WARNINGS: true

    steps:
      - uses: actions/checkout@v3

      - uses: r-lib/actions/setup-pandoc@v2

      - uses: r-lib/actions/setup-r@v2
        with:
          r-version: ${{ matrix.config.r }}
          http-user-agent: ${{ matrix.config.http-user-agent }}
          use-public-rspm: true
      
      - uses: r-lib/actions/setup-r-dependencies@v2
        with:
          extra-packages: devtools
      
      # Release disk space on runners
      - name: Release disk space on runners
        run: |
          sudo rm -rf /usr/share/dotnet # will release about 20GB if you don't need .NET
          sudo rm -rf /opt/ghc
          sudo rm -rf "/usr/local/share/boost"
          sudo rm -rf "$AGENT_TOOLSDIRECTORY"

      # Load package and generate two-region data
      - name: Load stateior, generate and save two-region tables
        run: |
          devtools::load_all()
          year <- ${{ matrix.data-year }}
          model_spec <- ${{ github.event.inputs.model_spec }}
          source("${{ matrix.script-run }}")
        shell: Rscript {0}
      
      # Upload .rds files
      - name: Upload .rds files and prepare zip for manual download
        uses: actions/upload-artifact@v3.1.1
        with:
          # Artifact name
          name: data and metadata
          # A file, directory or wildcard patter that describes what to upload
          path: "data/TwoRegion*.rds"
          if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn`
          # retention-days: 5 # cannot exceed the retention limit set by the repository, organization, or enterprise.
      
      # Upload .json files 
      - name: Upload .json files and prepare zip for manual download
        uses: actions/upload-artifact@v3.1.1
        with:
          # Artifact name
          name: data and metadata
          # A file, directory or wildcard patter that describes what to upload
          path: "inst/extdata/metadata/TwoRegion*.json"
          if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn`
          # retention-days: 5 # cannot exceed the retention limit set by the repository, organization, or enterprise.