Releases: UUPharmacometrics/xpose
Releases · UUPharmacometrics/xpose
v0.4.8
v0.4.7
v0.4.6
v0.4.5
General
- The
gg_theme
argument inxpose_data
,update_themes
or plots now accepts a function returning a complete ggplot2 theme. In addition themegg_theme
can now accept theme elements inupdate_themes
and plots. (#157) - Added compatibility with tidyr 1.0.0 (#166)
- Small fixes to vignettes, documentations and website
v0.4.4
General
- Improved documentation for
xpose_data
(@billdenney #99) - Fixed VPC error in the documentation (@callistosp #130)
- Fixed bug leading to errors when plotting poorly formatted ETA name (@romainfrancois #127)
- Compatibility improvements
v0.4.3
- Fixed bug in
get_prm()
/prm_table()
where off diagonal correlations were improperly computed. - Fixed bug in
print.xpose_data()
where a warning from stringi was returned. - Fixed multiple bugs introduced by the new versions of tidyverse packages
- Added compatibility to ggplot2 v3.0.0
v0.4.2
v0.4.1
General
- Added a code of conduct and a contributing document
- Added a roadmap document
- Improved integration of the xpose.nlmixr package
- Prevented a problem in the
print()
function with the upcoming ggplot2 version - Fixed bug in
summary()
where missing estimation method was reported if NM code written as METH=... instead of METHOD=... - Fixed bug where labels in
prm_table()
,get_prm()
were missing with a commented row in $THETA, $OMEGA or $SIGMA - Fixed bug in
prm_table()
,get_prm()
where onlyNA
would be reported when missing the -1000000006 record in the .ext file (i.e. NM <7.3) - Improved description of the
prm_table()
output - Fixed bug in
ind_plots()
where the aesthetics would get mixed up if the variable names were changed - Small fixes to vignettes, documentations and website
v0.4.0
General
- Added xpdb memory usage to
print.xpose_data()
- Replaced
print.prm.data()
toprm_table()
- Fixed documentation
Data import/edit
- Added compatibility with
dplyr::n()
when editing xpdb #51 - Added
get_special()
to access special data - Improved
get_prm()
labeller parsing with OMEGA and SIGMA BLOCKS get_prm()
andprm_table()
:- Both gained a
transform
argument to disable parameter transformation - RSE is now always reported (also for untransformed)
- Corrected RSE for off-diagonal elements from OMEGA and SIGMA when output as correlation and SE when output as standard deviation
- Both gained a
- Added
list_data()
,list_files()
andlist_special()
to get info on the data structure in the xpdb - Renamed the arguments
problem
,subprob
,method
andsource
to.problem
,.subprob
, etc. for consistency with dplyr functions. - Improved error checking for themes in
xpose_data
- Improved error checking in
get_prm()
Plots
print.xpose_plot()
now displays a message when the number of facets is > 20, informing that many panels are being printed and that it may take a while to render the plot- Improved
.problem
,.subprob
and.method
error checking
v0.3
General
- Improved documentation and testing
- Improved compatibility with NONMEM 7.4.1
- Improved website look, and content with new 'FAQ' and 'Plot' sections and a cheat-sheet
- Multiple bug small bug fixes and code improvements
- Added multiple page functionality to all plots and
xpose_save()
- Added
get_prm()
function
Data import/edit
- Improved
dir
andfile
arguments usage - Improved error robustness of
xpose_data()
- Added new dplyr verbs for xpdb editing:
slice()
,select()
,rename()
,distinct()
,summarize()
,group_by()
andungroup()
- dplyr verbs can now also be used to edit vpc data
- Added
irep()
function to add simulation counter to any dataset - Bug fix in
read_nm_files()
not properly reporting FO method - Bug fix in
read_nm_tables()
not properly parsing data (missing minus signs) in some very specific cases
Plots
- Small modifications to
xp_theme()
defaults - Faceting options can now be defined globally in the
xp_theme
- Added
amt_vs_idv()
plot - Improved faceting of minimization plots
- Multiples improvements to the
vpc_data()
andvpc()
functions - More keywords added to
template_titles