pyproject.toml

[tool.poetry]
name = "MyTarids_ROCrate"
version = "0.1.0"
description = "Scripts to pack data files into an RO-crate for MyTardis ingestion"
authors = ["James Love <james.love@auckland.ac.nz>", "Chris Seal <c.seal@auckland.ac.nz>"]
readme = "README.md"
packages = [{include = "src"}]

[tool.poetry.dependencies]
python = ">=3.10,<=3.12.5"
python-slugify = "^8.0.1"
pylint = "^3.1.0"
mypy = "^1.8.0"
slugify = "^0.0.1"
pandas = "^2.2.1"
xlrd = "^2.0.1"
pydantic = "^2.6.3"
backoff = "^2.2.1"
requests = "^2.31.0"
pydantic-settings = "^2.2.1"
mytardis-rocrate-builder = {git = "https://github.com/JLoveUOA/mytardis_rocrate_builder"}
ro-crate-py = {git = "https://github.com/UoA-eResearch/ro-crate-py.git",  branch = "encrypted-metadata"}
openpyxl = "^3.1.5"
click = "^8.1.7"
pre-commit = "^3.8.0"

[tool.poetry.group.test.dependencies]
pytest = "^8.0.2"
faker = "^27.4.0"
responses = "^0.25.3"


[tool.poetry.group.dev.dependencies]
pylint = "^3.1.0"
flake8 = "^6.1.0"
flake8-bandit = "^4.1.1"
flake8-mypy = "^17.8.0"
flake8-isort = "^6.1.0"
flake8-black = "^0.3.6"
coverage = {extras = ["toml"], version = "^7.3.1"}
toml = "^0.10.2"
types-python-slugify = "^8.0.0.3"
deptry = "^0.16.2"

[tool.isort]
profile = "black"

[tool.mypy]
files = [
       "**/*.py"
	  ]
ignore_missing_imports = true
exclude = [
       "^tests/.*$",
       "^docs/.*$",
       "^hackday-ro-crate/.*$"
       ]
strict = true

[tool.flake8]
max-line-length = 88
extend-ignore = "E203"

[tool.bandit.assert_used]
skips = ["tests/*", "test_*.py"]


[tool.coverage.run]
omit = [
     "tests/*",
     "docs/*",
     "src/specific_implementations/*",
     "src/helpers/*"
     ]

[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"

[tool.poetry.scripts]
ro_crate_builder = "src.cli.main:cli"