diff --git a/configs-datasets/PEOPLE_EA/Landsat_three-annual_NDWI_v1/workflow.ipynb b/configs-datasets/PEOPLE_EA/Landsat_three-annual_NDWI_v1/workflow.ipynb index c2b8b85..310e44d 100644 --- a/configs-datasets/PEOPLE_EA/Landsat_three-annual_NDWI_v1/workflow.ipynb +++ b/configs-datasets/PEOPLE_EA/Landsat_three-annual_NDWI_v1/workflow.ipynb @@ -125,7 +125,7 @@ }, { "cell_type": "code", - "execution_count": 6, + "execution_count": 5, "metadata": {}, "outputs": [ { @@ -133,7 +133,7 @@ "output_type": "stream", "text": [ "Found 10 STAC items\n", - "First item:\n", + "First stac item:\n", "{'assets': {'NDWI': {'description': 'Landsat NDWI',\n", " 'eo:bands': [{'description': 'NDWI', 'name': 'NDWI'}],\n", " 'file:size': 604265,\n", @@ -153,7 +153,7 @@ " 'type': 'Polygon'},\n", " 'id': 'NDWI_2000_1_1',\n", " 'links': [],\n", - " 'properties': {'created': '2024-02-13T10:06:36.203099Z',\n", + " 'properties': {'created': '2024-02-13T10:38:18.333702Z',\n", " 'datetime': '2000-01-01T00:00:00Z',\n", " 'description': 'Landsat NDWI',\n", " 'end_datetime': '2000-12-31T23:59:59Z',\n", @@ -202,808 +202,9 @@ }, { "cell_type": "code", - "execution_count": 7, + "execution_count": null, "metadata": {}, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "Converting UTC timezones encoded as 'Z' to +00:00...\n", - "=== item_files_in: ===\n", - "c:\\Users\\VERHAERV\\WorkingDirs\\stac-catalog-builder\\configs-datasets\\PEOPLE_EA\\Landsat_three-annual_NDWI_v1\\results\\test\\v0.5\\Landsat_three-annual_NDWI_v1\\2000\\NDWI_2000_1_1.json\n", - "c:\\Users\\VERHAERV\\WorkingDirs\\stac-catalog-builder\\configs-datasets\\PEOPLE_EA\\Landsat_three-annual_NDWI_v1\\results\\test\\v0.5\\Landsat_three-annual_NDWI_v1\\2000\\NDWI_2000_1_2.json\n", - "c:\\Users\\VERHAERV\\WorkingDirs\\stac-catalog-builder\\configs-datasets\\PEOPLE_EA\\Landsat_three-annual_NDWI_v1\\results\\test\\v0.5\\Landsat_three-annual_NDWI_v1\\2000\\NDWI_2000_1_3.json\n", - "c:\\Users\\VERHAERV\\WorkingDirs\\stac-catalog-builder\\configs-datasets\\PEOPLE_EA\\Landsat_three-annual_NDWI_v1\\results\\test\\v0.5\\Landsat_three-annual_NDWI_v1\\2000\\NDWI_2000_1_4.json\n", - 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"c:\\Users\\VERHAERV\\WorkingDirs\\stac-catalog-builder\\configs-datasets\\PEOPLE_EA\\Landsat_three-annual_NDWI_v1\\results\\test\\v0.5\\Landsat_three-annual_NDWI_v1\\2021\\NDWI_2021_5_4.json\n", - "c:\\Users\\VERHAERV\\WorkingDirs\\stac-catalog-builder\\configs-datasets\\PEOPLE_EA\\Landsat_three-annual_NDWI_v1\\results\\test\\v0.5\\Landsat_three-annual_NDWI_v1\\2021\\NDWI_2021_5_5.json\n", - "c:\\Users\\VERHAERV\\WorkingDirs\\stac-catalog-builder\\configs-datasets\\PEOPLE_EA\\Landsat_three-annual_NDWI_v1\\results\\test\\v0.5\\Landsat_three-annual_NDWI_v1\\2021\\NDWI_2021_5_6.json\n", - "c:\\Users\\VERHAERV\\WorkingDirs\\stac-catalog-builder\\configs-datasets\\PEOPLE_EA\\Landsat_three-annual_NDWI_v1\\results\\test\\v0.5\\Landsat_three-annual_NDWI_v1\\2021\\NDWI_2021_5_7.json\n", - "\n", - "\n" - ] - }, - { - "ename": "ValueError", - "evalue": "'c:\\\\Users\\\\VERHAERV\\\\WorkingDirs\\\\stac-catalog-builder\\\\configs-datasets\\\\PEOPLE_EA\\\\Landsat_three-annual_NDWI_v1\\\\results\\\\test\\\\v0.5\\\\Landsat_three-annual_NDWI_v1\\\\2000\\\\NDWI_2000_1_1.json' is not in the subpath of 'results\\\\test\\\\v0.5' OR one path is relative and the other is absolute.", - "output_type": "error", - "traceback": [ - "\u001b[1;31m---------------------------------------------------------------------------\u001b[0m", - "\u001b[1;31mValueError\u001b[0m Traceback (most recent call last)", - "Cell \u001b[1;32mIn[7], line 2\u001b[0m\n\u001b[0;32m 1\u001b[0m \u001b[38;5;66;03m# build collection\u001b[39;00m\n\u001b[1;32m----> 2\u001b[0m \u001b[43mbuild_collection\u001b[49m\u001b[43m(\u001b[49m\n\u001b[0;32m 3\u001b[0m \u001b[43m \u001b[49m\u001b[43mcollection_config_path\u001b[49m\u001b[38;5;241;43m=\u001b[39;49m\u001b[43mcollection_config_path\u001b[49m\u001b[43m,\u001b[49m\n\u001b[0;32m 4\u001b[0m \u001b[43m \u001b[49m\u001b[43mglob\u001b[49m\u001b[38;5;241;43m=\u001b[39;49m\u001b[43mtiffs_glob\u001b[49m\u001b[43m,\u001b[49m\n\u001b[0;32m 5\u001b[0m \u001b[43m \u001b[49m\u001b[43minput_dir\u001b[49m\u001b[38;5;241;43m=\u001b[39;49m\u001b[43mtiff_input_path\u001b[49m\u001b[43m,\u001b[49m\n\u001b[0;32m 6\u001b[0m \u001b[43m \u001b[49m\u001b[43moutput_dir\u001b[49m\u001b[38;5;241;43m=\u001b[39;49m\u001b[43mtest_output_path\u001b[49m\u001b[43m,\u001b[49m\n\u001b[0;32m 7\u001b[0m \u001b[43m \u001b[49m\u001b[43moverwrite\u001b[49m\u001b[38;5;241;43m=\u001b[39;49m\u001b[38;5;28;43;01mFalse\u001b[39;49;00m\u001b[43m,\u001b[49m\n\u001b[0;32m 8\u001b[0m \u001b[43m)\u001b[49m\n", - "File \u001b[1;32m~\\WorkingDirs\\stac-catalog-builder\\stacbuilder\\commandapi.py:68\u001b[0m, in \u001b[0;36mbuild_collection\u001b[1;34m(collection_config_path, glob, input_dir, output_dir, overwrite, max_files, save_dataframe)\u001b[0m\n\u001b[0;32m 59\u001b[0m output_dir \u001b[38;5;241m=\u001b[39m Path(output_dir)\u001b[38;5;241m.\u001b[39mexpanduser()\u001b[38;5;241m.\u001b[39mabsolute()\n\u001b[0;32m 61\u001b[0m pipeline \u001b[38;5;241m=\u001b[39m GeoTiffPipeline\u001b[38;5;241m.\u001b[39mfrom_config(\n\u001b[0;32m 62\u001b[0m collection_config\u001b[38;5;241m=\u001b[39mcoll_cfg,\n\u001b[0;32m 63\u001b[0m file_coll_cfg\u001b[38;5;241m=\u001b[39mfile_coll_cfg,\n\u001b[0;32m 64\u001b[0m output_dir\u001b[38;5;241m=\u001b[39moutput_dir,\n\u001b[0;32m 65\u001b[0m overwrite\u001b[38;5;241m=\u001b[39moverwrite,\n\u001b[0;32m 66\u001b[0m )\n\u001b[1;32m---> 68\u001b[0m \u001b[43mpipeline\u001b[49m\u001b[38;5;241;43m.\u001b[39;49m\u001b[43mbuild_collection\u001b[49m\u001b[43m(\u001b[49m\u001b[43m)\u001b[49m\n\u001b[0;32m 70\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m save_dataframe:\n\u001b[0;32m 71\u001b[0m GeodataframeExporter\u001b[38;5;241m.\u001b[39mexport_item_bboxes(pipeline\u001b[38;5;241m.\u001b[39mcollection)\n", - "File \u001b[1;32m~\\WorkingDirs\\stac-catalog-builder\\stacbuilder\\builder.py:1066\u001b[0m, in \u001b[0;36mGeoTiffPipeline.build_collection\u001b[1;34m(self)\u001b[0m\n\u001b[0;32m 1064\u001b[0m \u001b[38;5;250m\u001b[39m\u001b[38;5;124;03m\"\"\"Build the entire STAC collection.\"\"\"\u001b[39;00m\n\u001b[0;32m 1065\u001b[0m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mreset()\n\u001b[1;32m-> 1066\u001b[0m \u001b[38;5;28;43mself\u001b[39;49m\u001b[38;5;241;43m.\u001b[39;49m\u001b[43m_asset_metadata_pipeline\u001b[49m\u001b[38;5;241;43m.\u001b[39;49m\u001b[43mbuild_collection\u001b[49m\u001b[43m(\u001b[49m\u001b[43m)\u001b[49m\n", - "File \u001b[1;32m~\\WorkingDirs\\stac-catalog-builder\\stacbuilder\\builder.py:909\u001b[0m, in \u001b[0;36mAssetMetadataPipeline.build_collection\u001b[1;34m(self)\u001b[0m\n\u001b[0;32m 907\u001b[0m coll_file \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_collection_builder\u001b[38;5;241m.\u001b[39mcollection_file\n\u001b[0;32m 908\u001b[0m post_processor \u001b[38;5;241m=\u001b[39m PostProcessSTACCollectionFile(collection_overrides\u001b[38;5;241m=\u001b[39m\u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_collection_config\u001b[38;5;241m.\u001b[39moverrides)\n\u001b[1;32m--> 909\u001b[0m \u001b[43mpost_processor\u001b[49m\u001b[38;5;241;43m.\u001b[39;49m\u001b[43mprocess_collection\u001b[49m\u001b[43m(\u001b[49m\u001b[43mcoll_file\u001b[49m\u001b[43m)\u001b[49m\n", - "File \u001b[1;32m~\\WorkingDirs\\stac-catalog-builder\\stacbuilder\\builder.py:591\u001b[0m, in \u001b[0;36mPostProcessSTACCollectionFile.process_collection\u001b[1;34m(self, collection_file, output_dir)\u001b[0m\n\u001b[0;32m 589\u001b[0m out_dir: Path \u001b[38;5;241m=\u001b[39m output_dir \u001b[38;5;129;01mor\u001b[39;00m collection_file\u001b[38;5;241m.\u001b[39mparent\n\u001b[0;32m 590\u001b[0m new_coll_file, _ \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_create_post_proc_directory_structure(collection_file, out_dir)\n\u001b[1;32m--> 591\u001b[0m \u001b[38;5;28;43mself\u001b[39;49m\u001b[38;5;241;43m.\u001b[39;49m\u001b[43m_convert_timezones_encoded_as_z\u001b[49m\u001b[43m(\u001b[49m\u001b[43mcollection_file\u001b[49m\u001b[43m,\u001b[49m\u001b[43m \u001b[49m\u001b[43mout_dir\u001b[49m\u001b[43m)\u001b[49m\n\u001b[0;32m 593\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39mcollection_overrides:\n\u001b[0;32m 594\u001b[0m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_override_collection_components(new_coll_file)\n", - "File \u001b[1;32m~\\WorkingDirs\\stac-catalog-builder\\stacbuilder\\builder.py:650\u001b[0m, in \u001b[0;36mPostProcessSTACCollectionFile._convert_timezones_encoded_as_z\u001b[1;34m(cls, collection_file, output_dir)\u001b[0m\n\u001b[0;32m 648\u001b[0m out_dir \u001b[38;5;241m=\u001b[39m output_dir \u001b[38;5;129;01mor\u001b[39;00m collection_file\u001b[38;5;241m.\u001b[39mparent\n\u001b[0;32m 649\u001b[0m item_paths \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mcls\u001b[39m\u001b[38;5;241m.\u001b[39mget_item_paths_for_coll_file(collection_file)\n\u001b[1;32m--> 650\u001b[0m \u001b[43mconv\u001b[49m\u001b[38;5;241;43m.\u001b[39;49m\u001b[43mprocess_catalog\u001b[49m\u001b[43m(\u001b[49m\u001b[43min_coll_path\u001b[49m\u001b[38;5;241;43m=\u001b[39;49m\u001b[43mcollection_file\u001b[49m\u001b[43m,\u001b[49m\u001b[43m \u001b[49m\u001b[43min_item_paths\u001b[49m\u001b[38;5;241;43m=\u001b[39;49m\u001b[43mitem_paths\u001b[49m\u001b[43m,\u001b[49m\u001b[43m \u001b[49m\u001b[43moutput_dir\u001b[49m\u001b[38;5;241;43m=\u001b[39;49m\u001b[43mout_dir\u001b[49m\u001b[43m)\u001b[49m\n", - "File \u001b[1;32m~\\WorkingDirs\\stac-catalog-builder\\stacbuilder\\timezoneformat.py:159\u001b[0m, in \u001b[0;36mTimezoneFormatConverter.process_catalog\u001b[1;34m(self, in_coll_path, in_item_paths, output_dir)\u001b[0m\n\u001b[0;32m 157\u001b[0m num_files \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mlen\u001b[39m(in_item_paths)\n\u001b[0;32m 158\u001b[0m \u001b[38;5;28;01mfor\u001b[39;00m i, item_path \u001b[38;5;129;01min\u001b[39;00m \u001b[38;5;28menumerate\u001b[39m(in_item_paths):\n\u001b[1;32m--> 159\u001b[0m rel_path \u001b[38;5;241m=\u001b[39m \u001b[43mitem_path\u001b[49m\u001b[38;5;241;43m.\u001b[39;49m\u001b[43mrelative_to\u001b[49m\u001b[43m(\u001b[49m\u001b[43min_coll_path\u001b[49m\u001b[38;5;241;43m.\u001b[39;49m\u001b[43mparent\u001b[49m\u001b[43m)\u001b[49m\n\u001b[0;32m 160\u001b[0m out_path \u001b[38;5;241m=\u001b[39m output_dir \u001b[38;5;241m/\u001b[39m rel_path\n\u001b[0;32m 161\u001b[0m \u001b[38;5;28mprint\u001b[39m(\u001b[38;5;124mf\u001b[39m\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mPROGRESS: converting STAC item \u001b[39m\u001b[38;5;132;01m{\u001b[39;00mi\u001b[38;5;241m+\u001b[39m\u001b[38;5;241m1\u001b[39m\u001b[38;5;132;01m}\u001b[39;00m\u001b[38;5;124m of \u001b[39m\u001b[38;5;132;01m{\u001b[39;00mnum_files\u001b[38;5;132;01m}\u001b[39;00m\u001b[38;5;124m:\u001b[39m\u001b[38;5;130;01m\\n\u001b[39;00m\u001b[38;5;132;01m{\u001b[39;00mitem_path\u001b[38;5;132;01m}\u001b[39;00m\u001b[38;5;130;01m\\n\u001b[39;00m\u001b[38;5;124mto:\u001b[39m\u001b[38;5;130;01m\\n\u001b[39;00m\u001b[38;5;132;01m{\u001b[39;00mout_path\u001b[38;5;132;01m}\u001b[39;00m\u001b[38;5;124m\"\u001b[39m)\n", - "File \u001b[1;32mc:\\Users\\VERHAERV\\AppData\\Local\\miniconda3\\envs\\stac-catalog-builder\\Lib\\pathlib.py:730\u001b[0m, in \u001b[0;36mPurePath.relative_to\u001b[1;34m(self, *other)\u001b[0m\n\u001b[0;32m 728\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m (root \u001b[38;5;129;01mor\u001b[39;00m drv) \u001b[38;5;28;01mif\u001b[39;00m n \u001b[38;5;241m==\u001b[39m \u001b[38;5;241m0\u001b[39m \u001b[38;5;28;01melse\u001b[39;00m cf(abs_parts[:n]) \u001b[38;5;241m!=\u001b[39m cf(to_abs_parts):\n\u001b[0;32m 729\u001b[0m formatted \u001b[38;5;241m=\u001b[39m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_format_parsed_parts(to_drv, to_root, to_parts)\n\u001b[1;32m--> 730\u001b[0m \u001b[38;5;28;01mraise\u001b[39;00m \u001b[38;5;167;01mValueError\u001b[39;00m(\u001b[38;5;124m\"\u001b[39m\u001b[38;5;132;01m{!r}\u001b[39;00m\u001b[38;5;124m is not in the subpath of \u001b[39m\u001b[38;5;132;01m{!r}\u001b[39;00m\u001b[38;5;124m\"\u001b[39m\n\u001b[0;32m 731\u001b[0m \u001b[38;5;124m\"\u001b[39m\u001b[38;5;124m OR one path is relative and the other is absolute.\u001b[39m\u001b[38;5;124m\"\u001b[39m\n\u001b[0;32m 732\u001b[0m \u001b[38;5;241m.\u001b[39mformat(\u001b[38;5;28mstr\u001b[39m(\u001b[38;5;28mself\u001b[39m), \u001b[38;5;28mstr\u001b[39m(formatted)))\n\u001b[0;32m 733\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39m_from_parsed_parts(\u001b[38;5;124m'\u001b[39m\u001b[38;5;124m'\u001b[39m, root \u001b[38;5;28;01mif\u001b[39;00m n \u001b[38;5;241m==\u001b[39m \u001b[38;5;241m1\u001b[39m \u001b[38;5;28;01melse\u001b[39;00m \u001b[38;5;124m'\u001b[39m\u001b[38;5;124m'\u001b[39m,\n\u001b[0;32m 734\u001b[0m abs_parts[n:])\n", - "\u001b[1;31mValueError\u001b[0m: 'c:\\\\Users\\\\VERHAERV\\\\WorkingDirs\\\\stac-catalog-builder\\\\configs-datasets\\\\PEOPLE_EA\\\\Landsat_three-annual_NDWI_v1\\\\results\\\\test\\\\v0.5\\\\Landsat_three-annual_NDWI_v1\\\\2000\\\\NDWI_2000_1_1.json' is not in the subpath of 'results\\\\test\\\\v0.5' OR one path is relative and the other is absolute." - ] - } - ], + "outputs": [], "source": [ "# build collection\n", "build_collection(\n",