From 6f0a0dc68fd8f1ac27b66db9cf6c0b5d6e3595af Mon Sep 17 00:00:00 2001
From: JocelynSP <penington.j@wehi.edu.au>
Date: Wed, 16 Oct 2024 10:22:30 +1100
Subject: [PATCH] Add mosdepth to dockerfile

redoing Ed's commit that I deleted
---
 Docker/Dockerfile | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/Docker/Dockerfile b/Docker/Dockerfile
index 11ead31..97aa453 100644
--- a/Docker/Dockerfile
+++ b/Docker/Dockerfile
@@ -33,4 +33,6 @@ RUN conda update --all -c conda-forge --override-channels && \
     bwa=0.7.17 \
     samtools=1.16.1 \
     fastqc=0.11.8-0 \
-    multiqc=1.12.0 && conda clean -ay
+    multiqc=1.12.0 \
+    mosdepth=0.3.8 \
+    && conda clean -ay