no "images" directory

[MartaRusmini]

Hi
I'm running linkedSV on two of linked-read WGS. One has a tandem duplication, the other a known translocation.
This is my command:
linkedsv.py -i sample.phased_possorted_bam.bam -d path -r path/genome.fa -v hg38 -t 20 --wgs --germline_mode

It seems to work well (no error) and I obtained the following files:

but I cannot see the "images" directory. Can you help me?
Moreover, I cannot find in the bedpe or other files, neither the duplication (is a 13Kb dup) nor the translocation. Do you know why?

thnk you

[fangli80]

Hello,
Could you please share me the stdout and stderr of LinkedSV?
Thanks,
Li

[MartaRusmini]

Here the files in attachment thank you T514.linSV.err.txt <https://drive.google.com/file/d/1wu4MhXeBIvmFpqo4UlcMssgYEin_zENX/view?usp=drive_web> T514.linSV.out.txt <https://drive.google.com/file/d/14xHiKYaJHsf8dm3C6Pwob69nLAmtczso/view?usp=drive_web> Il giorno mar 1 feb 2022 alle ore 09:33 Li Fang ***@***.***> ha scritto:

…

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[MartaRusmini]

sorry, Can you please help me with this issue?