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Implementing JBrowse 2 checklist #182

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5 of 7 tasks
scottcain opened this issue Aug 22, 2022 · 1 comment
Open
5 of 7 tasks

Implementing JBrowse 2 checklist #182

scottcain opened this issue Aug 22, 2022 · 1 comment

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@scottcain
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scottcain commented Aug 22, 2022

  • convert remaining tracks configs.
  • merge existing code into stage (putting JBrowse embedded in location widget, and "demo"/beta implementation of synteny browser)
  • big issue: transition GBrowse_syn (separate checklist: #183)
  • update website links to GBrowse to point at JBrowse 2
  • create wormbase specific user tutorial

Not exactly related to retiring GBrowse, but needs to be done eventually (ie, these are lowest priority):

  • Port sequence feature widget
  • Port protein "homology" widget
@scottcain
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All of the tracks have been ported but one that I found while doing other things, because it is no longer included in JBrowse 1 for reasons that are not clear to me (see https://github.com/WormBase/website/issues/7406)

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