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hi,
i use hictool to generate hic contact matrix. your work do help me a lot. however i met some questions and need your help.
below is my script
##########my script###########
mypath/HiCtool-master/scripts/HiCtool_global_map_observed.sh
-i HiC_project_object.hdf5
-h mypath/HiCtool-master/scripts/
-b 1000000
-s hg38
-c my_chrom_size_file_path
-p 24
###########my problem###########
cat: ./observed_1000000/matrix_full_line_observed_1.txt: There is no such file or directory
In tutorial homepage i didn't find ,
i use hictool to generate hic contact matrix. your work do help me a lot. however i met some questions and need your help.
below is my script
##########my script###########
mypath/HiCtool-master/scripts/HiCtool_global_map_observed.sh
-i HiC_project_object.hdf5
-h mypath/HiCtool-master/scripts/
-b 1000000
-s hg38
-c my_chrom_size_file_path
-p 24
###########my problem###########
cat: ./observed_1000000/matrix_full_line_observed_1.txt: There is no such file or directory
In tutorial homepage i didn't find description about this file. please help me.
The text was updated successfully, but these errors were encountered:
hi,
i use hictool to generate hic contact matrix. your work do help me a lot. however i met some questions and need your help.
below is my script
##########my script###########
mypath/HiCtool-master/scripts/HiCtool_global_map_observed.sh
-i HiC_project_object.hdf5
-h mypath/HiCtool-master/scripts/
-b 1000000
-s hg38
-c my_chrom_size_file_path
-p 24
###########my problem###########
cat: ./observed_1000000/matrix_full_line_observed_1.txt: There is no such file or directory
In tutorial homepage i didn't find ,
i use hictool to generate hic contact matrix. your work do help me a lot. however i met some questions and need your help.
below is my script
##########my script###########
mypath/HiCtool-master/scripts/HiCtool_global_map_observed.sh
-i HiC_project_object.hdf5
-h mypath/HiCtool-master/scripts/
-b 1000000
-s hg38
-c my_chrom_size_file_path
-p 24
###########my problem###########
cat: ./observed_1000000/matrix_full_line_observed_1.txt: There is no such file or directory
In tutorial homepage i didn't find description about this file. please help me.
The text was updated successfully, but these errors were encountered: