Compiling issue on VerityMap

[cappadoc]

I had a problem when varitymap alignment run was executed.
Immediately after run, the following error message was output and the run stopped.

Read mapping started...
Compiling mapper...
Failed to compile VerityMap! Please try to compile it manually: run "make" in /home/.local/lib/python3.9/site-packages/VerityMap-2.0.0-py3.9.egg/veritymap

I have installed VerityMap locally using the source files including the libraries indicated in the requirements file because my linux environment cannot use the internet. After install, veritymap --help command displayed the available options without errors.

How can I resolve this problem?

[yeeus]

Had you solved this problem?

[LauraSkak]

Hey

I have the same problem and running make does not work.

[Isoris]

same here but what to expect they make nice tools and then stop maintaining it. then archive it something...

[Isoris]

bioconda install gcc_linux-64=9.4.0 gxx_linux-64=9.4.0

module load zlib

cd veritymap && rm -rf build/ && make