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where directory_of_refernces contains 10 FASTA files
I get the following error with my first reference when MetaQUAST starts summarizing
Summarizing results...
'MGYG000000001_clean' is not in list
Traceback (most recent call last):
File "/home/miw4007/anaconda3/envs/quast_env/bin/metaquast", line 427, in <module>
return_code = main(sys.argv[1:])
File "/home/miw4007/anaconda3/envs/quast_env/bin/metaquast", line 410, in main
create_meta_summary.do(html_summary_report_fpath, summary_output_dirpath, combined_output_dirpath,
File "/pbtech_mounts/homes064/miw4007/anaconda3/envs/quast_env/opt/quast-5.2.0/quast_libs/create_meta_summary.py", line 75, in do
get_results_for_metric(ref_names, metric, contigs_num, labels, output_dirpath_per_ref, qconfig.transposed_report_prefix + '.tsv')
File "/pbtech_mounts/homes064/miw4007/anaconda3/envs/quast_env/opt/quast-5.2.0/quast_libs/create_meta_summary.py", line 42, in get_results_for_metric
index_contig = labels.index(values[0])
ValueError: 'MGYG000000001_clean' is not in list
ERROR! exception caught!
The text was updated successfully, but these errors were encountered:
I'm running a command that is structured like this:
where
directory_of_refernces
contains 10 FASTA filesI get the following error with my first reference when MetaQUAST starts summarizing
The text was updated successfully, but these errors were encountered: