From 493f7591d22d2f8f0592fba6c5a5d42a2b04a188 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Melissa=20Weber=20Mendon=C3=A7a?= Date: Wed, 4 Dec 2024 10:58:04 -0300 Subject: [PATCH] Fix broken links after removing multiscale and chunked tutorials (#90) --- docs/tutorials/setup_acquisition/configure.md | 2 +- docs/tutorials/zarr/compressed.md | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/docs/tutorials/setup_acquisition/configure.md b/docs/tutorials/setup_acquisition/configure.md index 88e9c136..ed1ea3fc 100644 --- a/docs/tutorials/setup_acquisition/configure.md +++ b/docs/tutorials/setup_acquisition/configure.md @@ -65,7 +65,7 @@ config.video[0].camera.settings.pixel_type = acquire.SampleType.U16 ## Configure `Storage` `Storage` objects have 2 attributes, `settings`, a `StorageProperties` object, and an optional attribute `identifier`, which is an instance of the `DeviceIdentifier` class described above. -`StorageProperties` has 2 attributes `external_metadata_json` and `filename` which are strings of the filename or filetree of the output metadata in JSON format and image data in whatever format corresponds to the selected storage device, respectively. `first_frame_id` is an integer ID that corresponds to the first frame of the current acquisition and is typically 0. `pixel_scale_um` is the camera pixel size in microns. `acquisition_dimensions` is a list of `StorageDimension`, one for each acquisition dimension, ordered from fastest changing to slowest changing. For more information on using the `StorageDimension` class, check out [Chunking Data for Zarr Storage](../zarr/chunked.md). `enable_multiscale` is a boolean used to specify if the data should be saved as an image pyramid. See the [Multiscale tutorial](../zarr/multiscale.md) for more information. +`StorageProperties` has 2 attributes `external_metadata_json` and `filename` which are strings of the filename or filetree of the output metadata in JSON format and image data in whatever format corresponds to the selected storage device, respectively. `first_frame_id` is an integer ID that corresponds to the first frame of the current acquisition and is typically 0. `pixel_scale_um` is the camera pixel size in microns. `acquisition_dimensions` is a list of `StorageDimension`, one for each acquisition dimension, ordered from fastest changing to slowest changing. `enable_multiscale` is a boolean used to specify if the data should be saved as an image pyramid. We'll specify the name of the output image file below. diff --git a/docs/tutorials/zarr/compressed.md b/docs/tutorials/zarr/compressed.md index 1504f5b5..fa8781ef 100644 --- a/docs/tutorials/zarr/compressed.md +++ b/docs/tutorials/zarr/compressed.md @@ -63,7 +63,7 @@ import zarr compressed = zarr.open(config.video[0].storage.settings.filename) ``` -We'll print some of the data properties to illustrate how the data was compressed. Since we have not enabled [multiscale](multiscale.md) output, `out.zarr` will only have one top level array`"0"`. +We'll print some of the data properties to illustrate how the data was compressed. Since we have not enabled multiscale output, `out.zarr` will only have one top level array`"0"`. ```python