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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
S3method(plot,BetaUniformModel)
export(FDRestimate)
export(betaUniformPvalueSumTest)
export(betaUniformScore)
export(convertFromBUM)
export(falseNegativeFraction)
export(falsePositiveFraction)
export(fishersPvalueSumTest)
export(fitBetaUniformMixtureDistribution)
export(metaDEG)
export(noiseFractionUpperBound)
export(pValueThresholdAtConfidence)
export(rbetauniform)
export(trueNegativeFraction)
export(truePositiveFraction)
exportClasses(BetaUniformModel)
exportMethods(show)
import(Biobase)
import(Matrix)
import(assertthat)
import(data.table)
import(ggplot2)
import(latex2exp)
import(magrittr)
import(methods)
importFrom(Biobase,mkScalar)
importFrom(MASS,fitdistr)
importFrom(grDevices,terrain.colors)
importFrom(igraph,V)
importFrom(igraph,`V<-`)
importFrom(igraph,is.directed)
importFrom(igraph,is.igraph)
importFrom(igraph,vcount)
importFrom(igraph,vertex_attr)
importFrom(igraph,vertex_attr_names)
importFrom(purrr,map)
importFrom(purrr,map2)
importFrom(purrr,map_lgl)
importFrom(purrr,possibly)
importFrom(stats,coef)
importFrom(stats,dbeta)
importFrom(stats,logLik)
importFrom(stats,na.omit)
importFrom(stats,p.adjust)
importFrom(stats,pbeta)
importFrom(stats,pgamma)
importFrom(stats,qbeta)
importFrom(stats,rbeta)
importFrom(stats,rbinom)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(stringr,regex)
importFrom(stringr,str_extract)
importFrom(utils,capture.output)