Cytoscape

Cytoscape for bioinformatics analysis and visualization

Based on two workshops originally given by Michael Bales, PhD and Peter Oxley, PhD for the Applied Bioinformatics Core d:bug sessions in March and April, 2017.

Contents:

Presentation Slides

1. An introduction to Cytoscape. Created by Michael Bales, PhD.
2. Using cytoscape for bioinformatics. Created by Peter Oxley, PhD.

Tutorials

1. Creating basic networks in Cytoscape.
2. Using Cytoscape for network construction and visualization.
3. Using Cytoscape for Gene Ontology over-representation.