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environment.yml
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environment.yml
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name: imaging-transcriptomics
channels:
- defaults
dependencies:
- ca-certificates=2021.7.5
- certifi=2021.5.30
- libcxx=10.0.0
- libffi=3.3
- ncurses=6.2
- openssl=1.1.1k
- pip=21.1.3
- python=3.7.10
- readline=8.1
- sqlite=3.36.0
- tk=8.6.10
- tqdm=4.61.2
- wheel=0.36.2
- xz=5.2.5
- zlib=1.2.11
- pip:
- aiohttp==4.0.0a1
- alabaster==0.7.12
- appdirs==1.4.4
- async-timeout==3.0.1
- attrs==21.2.0
- babel==2.9.1
- bctpy==0.5.2
- beautifulsoup4==4.10.0
- bioservices==1.8.2
- black==21.9b0
- bleach==4.1.0
- build==0.6.0.post1
- cached-property==1.5.2
- cattrs==1.10.0
- chardet==3.0.4
- charset-normalizer==2.0.3
- click==8.0.3
- colorama==0.4.4
- colorlog==6.6.0
- cycler==0.10.0
- docutils==0.17.1
- easydev==0.12.0
- et-xmlfile==1.1.0
- execnet==1.9.0
- fpdf2==2.4.2
- gevent==21.12.0
- greenlet==1.1.2
- grequests==0.6.0
- gseapy==1.1.3
- h5py==3.3.0
- idna==3.2
- imagesize==1.2.0
- importlib-metadata==4.6.3
- iniconfig==1.1.1
- jinja2==3.0.1
- joblib==1.0.1
- keyring==23.1.0
- kiwisolver==1.3.1
- llvmlite==0.38.0
- lxml==4.7.1
- markupsafe==2.0.1
- matplotlib==3.4.2
- multidict==4.7.6
- mypy-extensions==0.4.3
- netneurotools==0.2.3
- nibabel==3.2.1
- nilearn==0.8.1
- numba==0.55.1
- numpy==1.21.1
- openpyxl==3.0.9
- packaging==21.0
- pandas==1.3.1
- pathspec==0.9.0
- patsy==0.5.1
- pep517==0.11.0
- pep8==1.7.1
- pexpect==4.8.0
- pillow==8.3.1
- pkginfo==1.7.1
- platformdirs==2.4.0
- pluggy==0.13.1
- ptyprocess==0.7.0
- py==1.10.0
- pygments==2.9.0
- pyparsing==2.4.7
- pytest==6.2.4
- pytest-cache==1.0
- python-dateutil==2.8.2
- pytz==2021.1
- pyyaml==5.4.1
- readme-renderer==29.0
- regex==2021.10.8
- requests==2.26.0
- requests-cache==0.9.0
- requests-toolbelt==0.9.1
- rfc3986==1.5.0
- scikit-learn==0.24.2
- scipy==1.7.0
- setuptools==52.0.0
- six==1.16.0
- snowballstemmer==2.1.0
- soupsieve==2.3.1
- sphinx==4.1.2
- sphinx-celery==2.0.0
- sphinxcontrib-applehelp==1.0.2
- sphinxcontrib-devhelp==1.0.2
- sphinxcontrib-htmlhelp==2.0.0
- sphinxcontrib-jsmath==1.0.1
- sphinxcontrib-qthelp==1.0.3
- sphinxcontrib-serializinghtml==1.1.5
- statsmodels==0.12.2
- style==1.1.0
- suds-community==1.0.0
- threadpoolctl==2.2.0
- tomli==1.2.1
- twine==3.4.2
- typed-ast==1.4.3
- typing-extensions==3.10.0.0
- update==0.0.1
- url-normalize==1.4.3
- urllib3==1.26.6
- vtk==9.1.0
- webencodings==0.5.1
- wrapt==1.13.3
- wslink==1.3.1
- xmltodict==0.12.0
- yarl==1.7.2
- zipp==3.5.0
- zope-event==4.5.0
- zope-interface==5.4.0
prefix: /Users/alessiogiacomel/anaconda3/envs/imaging-transcriptomics