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setup.py
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import setuptools
setuptools.setup(
name='eDICE',
version='0.1',
author = "Alex Hawkins-Hooker, Giovanni Visonà",
packages=["edice", "edice.data_loaders", "edice.models", "edice.utils"],
description="epigenomics Data Imputation through Contextualized Embeddings (eDICE)",
long_description="""
Code accompanying the paper ``Getting Personal with Epigenetics:
Towards Individual-specific Epigenomic Imputation with Machine
Learning'', introducing the eDICE model for epigenomic
imputation.
""",
keywords="epigenomics, imputation, transformer, attention, deep learning, machine learning",
python_requires=">=3.8, <4",
url = "https://github.com/alex-hh/eDICE",
license='MIT License',
install_requires=["tensorflow", "numpy", "pandas", "h5py", "pyYAML", "scikit-learn", "tqdm"],
# include_package_data=True
)